LOC120553194


Basic Information

Item Value
gene id LOC120553194
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 27069077 ~ 27072552 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791352.1
gcttgataatCCACTCACGGCGCTAAAGATAGGCGGCAGGATTATTTTCACGTGAGCCACGGGGCTTTCGAacagccgggcaggaagtggaacagcgagagcatccagtcaatttaTCAAAAGACACCCCCCACAACATCGTATACGTATGTCTCCTATACAACACCACGGACaacgagagattcatcttggagtacttgtagagacaatatcTGGGAGTTGGCCAGCAAGACACTCCGCTACTGAGACGCTCCtggtgtggtatggcgcgtggCGGGGGACGGATCAAAACCACAGCGCAGCCGGAACGCAGCTCAGACGCGCCTGGTGGAAAATCCGGGTAAGAGTGAACTTATCTTGTGTCACTGTGGTCAAAGTGATGAAGTAGTGTTAAGGAATTATGATTCCTCGAGTTTTATTAAttatcatttgttcattttccATAAACACTGTGTTCCAAATGGTCTCACACTGTTGTCTGAGCTGTGATATGGAGATGCACTCATCCCGGACTCAGCTATCCAGCTAGCAGGCTACACAGCACAGCGCCAGGACAGGACGAGTAACTCCGgtaagagcagaggaggaggactgtgtgtgtatgtcaacAACCTGTAGTGTACTAACACAGTGACTTTGGACCGTCACTGCTCCCGGGACCTGGAGTACGTGACTATCAAATGTCGTCCCATTTATCTCCCGAGAGAGTTTACCGTTGTCCTGATCACCGTTGTGTACATTCCGCCggatgctaacgctaacgtaaCTCTCGGACTTTTAAATGTTAGCATTAGCAGTCAACAGAGCAGGTATCCTGAGGCAGTGTTTATCGTTGCGGGGGACTTCAACCACGCAGACTTAAAAGCAGTGATCCCAAAATTCCATCAGCACGTAAAGTGTACAACCAGAGGAGCTAACACACTGGACAAGGTCTACTCAAACATCAAGCGGGGCTACAGGGTTAGCCCTTTACCACATCTGGCCCAGTCTGACCACCTGTCACTGCTTTCAGTCCTGGCATACACACCCCGCAGGAAAACCGCTCCTACCAtcacaaaaactgttaaaacatGGCCTGATGGAGCCTCTCAGGAGCTGCAAGACTGCTTTGACAGGACCTGTTGGGACATTTTTGAACATCCAGATCTGAATATGTTTACAGACAGTGTTCTGTGTTATATTAAAAACTGCATAGACACTGTCACAgtagacaaacacatacaggtCTACCCCAACCAGAAGCCCTGGATGTCAAAGGAggtccagcagttgttaaaggCGAGGAACAATGCCTTCAGATCAAGGGACGGGGCTCTCTACAGCGCAGCACGTACCAATCTGAAGCGGGGCATCCGAAAGGCCAAGTCAGACTACAACAACACCTTCGTCAAATTCACTGATGACACCACGGTGGTGGGGCTCATCTCGAAGGGGGATGAGTCCAACTATAGAGACGAGGTGGAGCAATTGGCAGGGTGGTGCAGAGCTAACAACTTGCTCCTCAATACATCAAAGACAAAGGAGCTAATCGTGGACTTCAGGAGGAAGAAAACGGACATCCAGCCACTGCTCATAGGTGGGACCTGTGTTGAGAGGGTCTCTGACTTCCGCTTCCTGGGAGTCAACATCATGGAGGACCTGATCTGGGACGCCCACACCACGGAGCTAGTAAAAAAGGCCCAGCAGAGACTTTACTTCCTGAGAGTCCTAAGGAGGAACAACATCCCCCAAAAACAGCTGGTGTCCTTCTATCGCTGCTCAATTGAGAGCATCATGTCatactgtctctgtgtgtgtggttttcaaGCTGCACTGTGGCACAGAGAAAAAAGCTCCAGGGGGTCATAAAGGCAGCACAGAAAACCATTGGctgccctctcccctccctggAAGAACTTCACAGCTCCTGCTGCCTCAAAAAGGCCAAAACCATCCTACAGGACTCATCACACCCCGGTCACACACTGTTCGAACTACTGCCGTCAGGCAGGAGATACAGGTCCATGAAATCAAGAACAAACAGACTACAAAACAGCTTTTATCCAACAGCTGTAAGTGCATTGAATAATGCTGCTAAAGTATAGTTCCTACCACTAATCTACCTCAATAGGGCTATGtgcaattttttaaatgtggatgCCTGTATGAGTTtgtctcccatgtgtttttaGCATTAGTATAATAGGTTTGCAGTAgtagctttttttttactatgtatttattatttattatggtATATATTACCCCATAGATGTTTGGCACTGACAAGGACTGCACTGAATTCCGTTGTATCtgttacaatgacaataaagatattctattctattcagcCAGAGGCCCATCTAGAGGTTTTGTTTACTGTGACAGGAGTAGGTACATTCCTGTAGCTATCGGCTGGGGACTTTTTATTGAAATCTGTCTGTCAACTGTgtacacatatactgtatgacaGCCTGTCACTGGTGAAGAAGACAGTATCTCTGAATGACCGAAGGAAAAGCTATATATAGAGTATGAAATTGTATGGAGACATGCAAAAGCTTGTCATTGGTTATTGAGCAGGGTTATTGTAAAGAAATCTTTTCATTGgtttaaaaacatattcattTGGCTGCTTTCCAATGAGCATAGACTTCCTGTTTTGTGACAAGTATGAAATCATTATGTATCTCTGTGTTCTTTGGAAGATGCTGAGGAAAACTGATCAGGTGAGACCTTGTTACTTTTCCTCGGTAACTTctctgtgattaattacataaaacatttgcaatatTCACCTTTAA
>XM_039791354.1
gcttgataatCCACTCACGGCGCTAAAGATAGGCGGCAGGATTATTTTCACGTGAGCCACGGGGCTTTCGAacagccgggcaggaagtggaacagcgagagcatccagtcaatttaTCAAAAGACACCCCCCACAACATCGTATACGTATGTCTCCTATACAACACCACGGACaacgagagattcatcttggaggtggaaaaacatatATAGACACCGCATATCTTTTTTATAAAGACaacgccagaaaagagaaggcatggagtgcttggagtggaaggtagatactagttTAATAAACAcctgattgttctgtaaagtacttgtagagacaatatcTGGGAGTTGGCCAGCAAGACACTCCGCTACTGAGACGCTCCtggtgtggtatggcgcgtggCGGGGGACGGATCAAAACCACAGCGCAGCCGGAACGCAGCTCAGACGCGCCTGGTGGAAAATCCGGGTAAGAGTGAACTTATCTTGTGTCACTGTGGTCAAAGTGATGAAGTAGTGTTAAGGAATTATGATTCCTCGAGTTTTATTAAttatcatttgttcattttccATAAACACTGTGTTCCAAATGGTCTCACACTGTTGTCTGAGCTGTGATATGGAGATGCACTCATCCCGGACTCAGCTATCCAGCTAGCAGGCTACACAGCACAGCGCCAGGACAGGACGAGTAACTCCGCATTAGCAGTCAACAGAGCAGGTATCCTGAGGCAGTGTTTATCGTTGCGGGGGACTTCAACCACGCAGACTTAAAAGCAGTGATCCCAAAATTCCATCAGCACGTAAAGTGTACAACCAGAGGAGCTAACACACTGGACAAGGTCTACTCAAACATCAAGCGGGGCTACAGGGTTAGCCCTTTACCACATCTGGCCCAGTCTGACCACCTGTCACTGCTTTCAGTCCTGGCATACACACCCCGCAGGAAAACCGCTCCTACCAtcacaaaaactgttaaaacatGGCCTGATGGAGCCTCTCAGGAGCTGCAAGACTGCTTTGACAGGACCTGTTGGGACATTTTTGAACATCCAGATCTGAATATGTTTACAGACAGTGTTCTGTGTTATATTAAAAACTGCATAGACACTGTCACAgtagacaaacacatacaggtCTACCCCAACCAGAAGCCCTGGATGTCAAAGGAggtccagcagttgttaaaggCGAGGAACAATGCCTTCAGATCAAGGGACGGGGCTCTCTACAGCGCAGCACGTACCAATCTGAAGCGGGGCATCCGAAAGGCCAAGTCAGACTACAACAACACCTTCGTCAAATTCACTGATGACACCACGGTGGTGGGGCTCATCTCGAAGGGGGATGAGTCCAACTATAGAGACGAGGTGGAGCAATTGGCAGGGTGGTGCAGAGCTAACAACTTGCTCCTCAATACATCAAAGACAAAGGAGCTAATCGTGGACTTCAGGAGGAAGAAAACGGACATCCAGCCACTGCTCATAGGTGGGACCTGTGTTGAGAGGGTCTCTGACTTCCGCTTCCTGGGAGTCAACATCATGGAGGACCTGATCTGGGACGCCCACACCACGGAGCTAGTAAAAAAGGCCCAGCAGAGACTTTACTTCCTGAGAGTCCTAAGGAGGAACAACATCCCCCAAAAACAGCTGGTGTCCTTCTATCGCTGCTCAATTGAGAGCATCATGTCatactgtctctgtgtgtgtggttttcaaGCTGCACTGTGGCACAGAGAAAAAAGCTCCAGGGGGTCATAAAGGCAGCACAGAAAACCATTGGctgccctctcccctccctggAAGAACTTCACAGCTCCTGCTGCCTCAAAAAGGCCAAAACCATCCTACAGGACTCATCACACCCCGGTCACACACTGTTCGAACTACTGCCGTCAGGCAGGAGATACAGGTCCATGAAATCAAGAACAAACAGACTACAAAACAGCTTTTATCCAACAGCTGTAAGTGCATTGAATAATGCTGCTAAAGTATAGTTCCTACCACTAATCTACCTCAATAGGGCTATGtgcaattttttaaatgtggatgCCTGTATGAGTTtgtctcccatgtgtttttaGCATTAGTATAATAGGTTTGCAGTAgtagctttttttttactatgtatttattatttattatggtATATATTACCCCATAGATGTTTGGCACTGACAAGGACTGCACTGAATTCCGTTGTATCtgttacaatgacaataaagatattctattctattcagcCAGAGGCCCATCTAGAGGTTTTGTTTACTGTGACAGGAGTAGGTACATTCCTGTAGCTATCGGCTGGGGACTTTTTATTGAAATCTGTCTGTCAACTGTgtacacatatactgtatgacaGCCTGTCACTGGTGAAGAAGACAGTATCTCTGAATGACCGAAGGAAAAGCTATATATAGAGTATGAAATTGTATGGAGACATGCAAAAGCTTGTCATTGGTTATTGAGCAGGGTTATTGTAAAGAAATCTTTTCATTGgtttaaaaacatattcattTGGCTGCTTTCCAATGAGCATAGACTTCCTGTTTTGTGACAAGTATGAAATCATTATGTATCTCTGTGTTCTTTGGAAGATGCTGAGGAAAACTGATCAGGTGAGACCTTGTTACTTTTCCTCGGTAACTTctctgtgattaattacataaaacatttgcaatatTCACCTTTAA
>XR_005638128.1
gcttgataatCCACTCACGGCGCTAAAGATAGGCGGCAGGATTATTTTCACGTGAGCCACGGGGCTTTCGAacagccgggcaggaagtggaacagcgagagcatccagtcaatttaTCAAAAGACACCCCCCACAACATCGTATACGTATGTCTCCTATACAACACCACGGACaacgagagattcatcttggaggtggaaaaacatatATAGACACCGCATATCTTTTTTATAAAGACaacgccagaaaagagaaggcatggagtgcttggagtggaaggtagatactagttTAATAAACAcctgattgttctgtaaagtacttgtagagacaatatcTGGGAGTTGGCCAGCAAGACACTCCGCTACTGAGACGCTCCtggtgtggtatggcgcgtggCGGGGGACGGATCAAAACCACAGCGCAGCCGGAACGCAGCTCAGACGCGCCTGGTGGAAAATCCGGGTAAGAGTGAACTTATCTTGTGTCACTGTGGTCAAAGTGATGAAGTAGTGTTAAGGAATTATGATTCCTCGAGTTTTATTAAttatcatttgttcattttccATAAACACTGTGTTCCAAATGGTCTCACACTGTTGTCTGAGCTGTGATATGGAGATGCACTCATCCCGGACTCAGCTATCCAGCTAGCAGGCTACACAGCACAGCGCCAGGACAGGACGAGTAACTCCGgtaagagcagaggaggaggactgtgtgtgtatgtcaacAACCTGTAGTGTACTAACACAGTGACTTTGGACCGTCACTGCTCCCGGGACCTGGAGTACGTGACTATCAAATGTCGTCCCATTTATCTCCCGAGAGAGTTTACCGTTGTCCTGATCACCGTTGTGTACATTCCGCCggatgctaacgctaacgtaaCTCTCGGACTTTTAAATGTTAGCATTAGCAGTCAACAGAGCAGGTATCCTGAGGCAGTGTTTATCGTTGCGGGGGACTTCAACCACGCAGACTTAAAAGCAGTGATCCCAAAATTCCATCAGCACGTAAAGTGTACAACCAGAGGAGCTAACACACTGGACAAGGTCTACTCAAACATCAAGCGGGGCTACAGGGTTAGCCCTTTACCACATCTGGCCCAGTCTGACCACCTGTCACTGCTTTCAGTCCTGGCATACACACCCCGCAGGAAAACCGCTCCTACCAtcacaaaaactgttaaaacatGGCCTGATGGAGCCTCTCAGGAGCTGCAAGACTGCTTTGACAGGACCTGTTGGGACATTTTTGAACATCCAGATCTGAATATGTTTACAGACAGTGTTCTGTGTTATATTAAAAACTGCATAGACACTGTCACAgtagacaaacacatacaggtCTACCCCAACCAGAAGCCCTGGATGTCAAAGGAggtccagcagttgttaaaggCGAGGAACAATGCCTTCAGATCAAGGGACGGGGCTCTCTACAGCGCAGCACGTACCAATCTGAAGCGGGGCATCCGAAAGGCCAAGTCAGACTACAACAACACCTTCGTCAAATTCACTGATGACACCACGGTGGTGGGGCTCATCTCGAAGGGGGATGAGTCCAACTATAGAGACGAGGTGGAGCAATTGGCAGGGTGGTGCAGAGCTAACAACTTGCTCCTCAATACATCAAAGACAAAGGAGCTAATCGTGGACTTCAGGAGGAAGAAAACGGACATCCAGCCACTGCTCATAGGTGGGACCTGTGTTGAGAGGGTCTCTGACTTCCGCTTCCTGGGAGTCAACATCATGGAGGACCTGATCTGGGACGCCCACACCACGGAGCTAGTAAAAAAGGCCCAGCAGAGACTTTACTTCCTGAGAGTCCTAAGGAGGAACAACATCCCCCAAAAACAGCTGGTGTCCTTCTATCGCTGCTCAATTGAGAGCATCATGTCatactgtctctgtgtgtgtggttttcaaGCTGCACTGTGGCACAGAGAAAAAAGCTCCAGGGGGTCATAAAGGCAGCACAGAAAACCATTGGctgccctctcccctccctggAAGAACTTCACAGCTCCTGCTGCCTCAAAAAGGCCAAAACCATCCTACAGGACTCATCACACCCCGGTCACACACTGTTCGAACTACTGCCGTCAGGCAGGAGATACAGGTCCATGAAATCAAGAACAAACAGACTACAAAACAGCTTTTATCCAACAGCTTATATGGACTCGTTTCTGGGTTTCTTCCTTCCTTTGCGGACTGCTTATTCACTGCTGCTGATCCAGAACCAGGTCCTGGATGGTCACCTCCGAAAGCTACCGTATATTGCAGTAATACTAGCACTTAAAACACTAATGTAATACATCTTCCAGCCACCAGTGGCAGcaccacacacactgatactgatcactgactTCAGTCAGGGAGCGAAGCAAAAATCCTGAACCATTTTGGATTTGATATGGTTTGTATTGACTTCAACAgaagcagtgttgtaatgtaacaaagtataAATACttagttactgtacttaagtacaatgttCACGTctctttactttactttgttatttatatttctggaaactttttCTGGAAACTTTGACTTTAACTCCCCTAAGTGTCCTTGTTACTCGTTACTTGCGAGTGAAAGATTCttcctcacaaaaaaaaattatattctgtttctgtttttctctttgtagtcagactttgaatttaaaatttaagACGGTGTGGAAACTGTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791352.1 True 2783 mRNA 0.46 2 27069077 27071984
XM_039791354.1 False 2691 mRNA 0.45 2 27069077 27071984
XR_005638128.1 False 2705 transcript 0.47 2 27069077 27072552

Neighbor

gene id symbol gene type direction distance location
ndufa5 ndufa5 coding upstream 17795 27046066 ~ 27051282 (+)
aebp2 LOC103362558,LOC104950851 coding upstream 24660 27019362 ~ 27044417 (+)
braf braf coding upstream 642033 26386815 ~ 26427044 (+)
cnot4b NA coding upstream 815142 26222789 ~ 26253935 (+)
LOC120553199 LOC104965315 coding upstream 849720 26216141 ~ 26219357 (+)
gpr22a gpr22,LOC103362561,LOC104950263 coding downstream 65494 27138046 ~ 27146791 (+)
LOC120553521 NA coding downstream 151710 27224262 ~ 27231391 (+)
LOC120553763 NA coding downstream 180864 27253416 ~ 27272215 (+)
golt1ba golt1b,LOC101473753,LOC106532178,LOC103459552,LOC106907182,LOC105929813,LOC102297447 coding downstream 564536 27637088 ~ 27644879 (+)
spx spx coding downstream 575451 27648003 ~ 27651082 (+)
G230658 NA non-coding upstream 188090 26880507 ~ 26880987 (+)
G230645 NA non-coding upstream 387979 26680864 ~ 26681098 (+)
G230635 NA non-coding upstream 454905 26613952 ~ 26614172 (+)
G230600 NA non-coding upstream 636955 26428434 ~ 26432122 (+)
G230604 NA non-coding upstream 676899 26391638 ~ 26392178 (+)
G230685 NA non-coding downstream 43374 27115926 ~ 27116894 (+)
G230746 NA non-coding downstream 159842 27232394 ~ 27233038 (+)
G230773 NA non-coding downstream 209947 27282499 ~ 27282919 (+)
G230774 NA non-coding downstream 210401 27282953 ~ 27283275 (+)
G230783 NA non-coding downstream 398536 27471088 ~ 27472678 (+)
LOC120553759 NA other upstream 97224 26693356 ~ 26971853 (+)
mrps33 mrps33,LOC106591474 other upstream 687968 26372714 ~ 26381109 (+)
arhgef39 arhgef39 other upstream 962254 26038188 ~ 26106823 (+)
LOC120553706 NA other upstream 1256249 25810407 ~ 25812828 (+)
msrb3 msrb3 other upstream 1406258 25641840 ~ 25662819 (+)
G230842 NA other downstream 530453 27603005 ~ 27603702 (+)
G230904 NA other downstream 868769 27941321 ~ 27947473 (+)
G230975 NA other downstream 985179 28057731 ~ 28058218 (+)
trnat-ugu_41 NA other downstream 1398254 28470806 ~ 28470878 (+)
trnak-uuu_24 NA other downstream 1398554 28471106 ~ 28471178 (+)

Expression


Co-expression Network