LOC120553236 (strap)


Basic Information

Item Value
gene id LOC120553236
gene name strap
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 27848579 ~ 27862086 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791442.1
GTGGTTGGCGGAACATCACCGGCTATATTATCGCTGTATAGTTACGCCGCGTTGCACGTTGCTAGTTAGTTGCAATGTTGTAGCTATTAGCGCGATAGCCAATCCTTCGCTGGGAGGGGGACCCACCGAGTAGTTTGACAAACATACTGAGGGAATTCTCACTCACCATTCAACTGCTGGTCAACGGAAATCACTCACCCaaatagtaacgttagctagctggttGTCTTGTCATTCTCCTAACCagctagcctagcctagcccgGTAGCCTAGCCAGCTAGTTAGCAAGCTATCCAATAGCGTTCTACTGTCTACTCCCTCCGTGTGAACAGTCTCCTGCCCAGCTGGAGGACCATGGCGATGAGACAGACTCCGCTCACCTGCTCCGGTCACACCCGGCCTGTGGTGGACCTGGCCTTCAGTGGAATCACTCCCTATGGCTACTTTCTCATCAGCGCCTGCAAGGATGGCAAGCCCATGTTGCGCCAGGGAGACACAGGGGACTGGATAGGAACGTTTCTGGGTCACAAAGGCGCTGTCTGGGGAGCCACTCTGAATACAGACGCCACCAAGGCAGCCACTGCTGCAGCTGACTTCACAGCAAAGGTGTGGGATGCAGTGAGTGGAGACGAGGTCCTCACactggcacacaaacacatcgtCAAGACTGTCACCTTTACTCAGGACAGCAACTGTCTGCTGACTGCAGGAAATGACAAGCTGCTGCGCATCTACGATCTCAGCAACCCTGAAGCAGCACCTCTGGAGATTGCAGGTCACACCTCAGCCATAAAAAAAGCCTTGTGGTGTAACAACGACAAGCAGATCCTCTCTGCTGCCGATGACAAAACCATACGGCTGTGGGACAGGAGCTCCATGGAGGAGGTGAAGACGCTAACGTTCGACACGTCAGTGAGCAGCATGGAGTATGTGGCGGATGGAGAGATACTTGTGATCACATACGGAAAGACAATCGCTTTCTACAACGCTCTGAGCCTGGACCTGATAAAGACAGTGGAGGCCCCGGCCCCTATCAACTCAGCCTCCCTCCACCCAGAGAAAGACTTCTTTGTTGCCGGTGGAGAGGACTTCAAGCTCTACAAATTTGACTACAGCACTAAAGAGGAGCTGGAGTCCTATAAGGGTCACTTTGGTCCAGTGCACTGTGTTCGTTTCAGTCCAGATGGCGAGCTGTATGCCAGCGGCTCTGAGGATGGCACGCTCCGACTGTGGCAGACGGCTGTGGGGAAAACCTATGGCCTGTGGAAGTGTGTCCTTCCTGAGGACCTGGGTGCCGAGAACTCTGAACAGATGTACACGTCGGCCCCTGAGATCAAAGCATGAGGAGAAAGCAGTGCTGTTTGGAAATAGgatgagaagagaaaagaaTTGCAAAGGAAACGAGCAGAGTAGTGTTCCAGCGTTCTATCTGGCCCCAGCAAGGAGCAGAGTCCAGAGCACCGCCATCCATCAGGAACTGATGTGGATATTATGACTGCCTTGTCTGTCATGGactaacacaacaacaacaacaacaacaacaacaacaacacacagtatGCAGTCACATGGGCTGTAGAGTAAAGCAGTAGACCTGTGAGTGTCGGCTCATCGCTGCCTGCTTTCCCTCTGATTAGCCCAATTCTGTCTGCTTAAACTTGTTTTAAAGCTTTTTGAAACCCAACCCCCCCTCAATCACATTATGCTAAAAGATATGTTATGAGCTGGACCAAGGCTCTTGTTTTCAGTTCACATTTACAAGAATATTATTAGTAGTTGCACAGTTTGTGCTAAAGAAAAGTgctttcatttctttaaacattgCTTTGAGTATCTGCTGCTTTTGTACTTGTTGAGTATATAAAGTCAAGTGTCCAAATACaagaaaatattgttttgtgtcaaagcagGCAAGAGAAGAAATGCCACTGggtttttagttttcattttggtttctgtcatttttgtttttttcatcttgGTTTCAGTCTTCATTTGTGTCCAGTGatgaaataaataaaggcattactgttttatttcaaagtaaTGCACAAAGAGCAAA

Function

symbol description
strap Predicted to enable kinase activity. Predicted to act upstream of or within phosphorylation. Human ortholog(s) of this gene implicated in adenocarcinoma; colorectal carcinoma; large cell carcinoma; lung carcinoma; and squamous cell neoplasm. Orthologous to human STRAP (serine/threonine kinase receptor associated protein).

NR:

description
PREDICTED: serine-threonine kinase receptor-associated protein isoform X2

GO: NA

KEGG:

id description
K13137 STRAP, UNRIP; serine-threonine kinase receptor-associated protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791442.1 True 2063 mRNA 0.49 9 27848579 27862086

Neighbor

gene id symbol gene type direction distance location
tmpoa tmpo coding downstream 416 27798509 ~ 27848163 (-)
slc25a3a slc25a3 coding downstream 69396 27762883 ~ 27779183 (-)
LOC120553859 NA coding downstream 75074 27773303 ~ 27773505 (-)
LOC120553860 NA coding downstream 83987 27764394 ~ 27764592 (-)
ldhba ldhb coding downstream 115638 27704795 ~ 27732941 (-)
LOC120552998 NA coding upstream 171411 28033497 ~ 28037035 (-)
LOC120553766 LOC107743936,LOC107602777 coding upstream 264500 28126586 ~ 28132212 (-)
LOC120553769 NA coding upstream 702813 28564899 ~ 28566747 (-)
LOC120553775 NA coding upstream 705899 28567985 ~ 28577657 (-)
LOC120553219 NA coding upstream 880436 28742522 ~ 28743502 (-)
G230920 NA non-coding downstream 86919 27761455 ~ 27761660 (-)
G230853 NA non-coding downstream 242773 27605459 ~ 27605806 (-)
G230826 NA non-coding downstream 294080 27553761 ~ 27554499 (-)
G230818 NA non-coding downstream 351014 27497191 ~ 27497565 (-)
G230815 NA non-coding downstream 368212 27480102 ~ 27480367 (-)
G230933 NA non-coding upstream 78946 27941032 ~ 27947477 (-)
G230946 NA non-coding upstream 112599 27974685 ~ 27976238 (-)
G230947 NA non-coding upstream 114424 27976510 ~ 27976727 (-)
G230965 NA non-coding upstream 161926 28024012 ~ 28024491 (-)
G230977 NA non-coding upstream 202464 28064550 ~ 28064829 (-)
ipo8 ipo8 other downstream 297867 27502100 ~ 27550712 (-)
G230730 NA other downstream 729982 27117206 ~ 27118597 (-)
G230594 mrps33 other downstream 1467214 26375692 ~ 26381365 (-)
mkrn1 mkrn1 other downstream 1652069 26171320 ~ 26196510 (-)
LOC120553115 NA other downstream 2247199 25595578 ~ 25601380 (-)
LOC120553767 LOC104927640,LOC103363517 other upstream 478996 28341082 ~ 28430526 (-)
G231126 NA other upstream 882517 28744603 ~ 28745246 (-)
G231136 NA other upstream 929919 28792005 ~ 28792745 (-)
G231143 NA other upstream 972180 28834266 ~ 28837740 (-)

Expression


Co-expression Network