dcp1b (LOC106595781)


Basic Information

Item Value
gene id dcp1b
gene name LOC106595781
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 13339059 ~ 13353840 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791503.1
TCTGGGTTGGTTGTTTACTGTCTGGGTAAACATGGCCGTTGACAAACTCACTGATGGCAGTTAGCCCTCAATAACTCTTGACAATTTGAAATGTACAAGTCTTGAGTTGCAAAACAATCTACTGCGCAGTTacaaattttattgtctttttacCTTGCTGTTGGTTTGGTTTTTATCTCATACTCCTGCGACTCGTTAGCCGCTGAAGCTAGGTAGCGAGCTAACTTCTCCATAGGGAACAATGACAGCAACttctgcaggtagcagcagctgCCTCACCGCTAAAGGACTGGACATAAGTCtggctgctctacagcgacaAGACCCATACATCAATGACATTGTGGACGTGGCCAGCCAAGTTGCCCTGTATACTTATAACAACAGGGCAAATGAGTGGgAGAAGACAGAGGTGGAAGGCACCCTTTTTATTTACACAAGACTGGCATCTCCCAGGCATGGTTTCACCATTATGAACAGACTCAGTATGGAGAACTTGACAGAGCCAATTACCAAAGACCTGGACTTCCAGCTCCAGCACCCTTTCCTGCTTTATCGCAATGCACGGTTGGTTATCCATGGCATTTGGTTCTATGATAAGGAGGACTGTCAACGTATTGCTCAGAGAATGAAGATcctgaCCCAACAGGAGCAGACCCTGGCACACTCTCAAGGTGGATGGTTGTCTCCAGGAGGAGTACGTGGTGGAGGAGTACGTGGTGGAGGAGTAGGTGGAGTActtggaggaggaggaagtgaaGGAAAGGCAGTGGACATTATTCAGATGTTGACCAAAGCGCACACAGAGTATGACAAGTCTACATCAGAGCCAAAGGAGATTGGCGGCAGCAGTGTTATTTATGGAAACCCCAACCTGATCAAGCCAATACCTGTTAAACTGAACACTCAGGACAGTGAAAGTGCTGAACccaagtctctctctcttgccaCCCTTTTTGGCTCTCAACATCAACATCAGCACTCATCCAAACCTGACCCAGTCTCTCCTATGGCCACCACAGGGACAGGTCCATCACCGAGACAAGTCAATCGCCCACCTGTAGCACGTTCGCTGAAATACGATGATACAGTAAACTCTGGCAGAAGTGTGCCCTCCAAAGGAGGGAACCTCGCCATGGTTGGGTGTTCAGATGGAGGGCCCAGGGCTGTGATCGGAGGACAAATAGTCGGGGAACATGGTGGAAATGTTGTTATGGGCTTGCTGCCGTGTCCCACTACCgcccatcagcagcagcagaaccaGCCTCAGCACTGCCCAGCCATCCAGAAACTCATGCAGGGACAGAGAGGAGTGGGTGTCGTCGGAGGAGTGCTTCAGACCCTGTCCGAGTCCCCCGAGAACAGGCTGTGTGACAACGGGGTGCCGCTGGAgcatcaccaccaccatcaccatctgtaccatcatcatcagcagcagcaccaccaccttcatcatcatcaacaacagcaacagcttCAAGCTGACCCAATCAGGAAACTTTTCCAAAGCcagcctcctcttccctcctccaACCCTCCGCCTCTGCAGCAGAACCCCCATCTCTCCTCTCAGCCCGTAATGGTGGATTCTGTGTCATGTTCCCACCTTCAAGCGCAACAAAGCCAGCAGCTGTTTTTTAGCCTACCTAAACCTCAACCAGAAGCACAGCACAACAGCCATTCAGCTTTAACTATACAGGGAACAGTTCTGTCTTCCCAGATGTCTGGTGTGGTATCACCTCATGAGCTCCTGCAAAAGCTCCAGCTGGTTCAGCAGGAACAAAGCCTTGCTTCCCATGATCCCCCTCGACTCTGTCCAGGACTGGCCCCTCGATTCCTGGGGCCCACTCAAGGTCAAGGTGCCGACTCAGTTGTAAGCCCTGTCCCAAACCAGACCACAGGCACTGCTGGTCAAAAGGCTGCGCTGCAGTTTCAGATCATCTCCCCCCAGCGGATACCAGCCACTGTGGCCCCCAACCTGCTCCTCTCCCCCAGTGTGTTCACTCAGGCAAAGTCTAGTGGTGGGTTGTCAGTGGTTGCAGAGAGCTGCCCTGCCCCCTCAACCCTGTCCAGACCCCCATTGCAGCAGGAGATCATAGTTCTGTCCAGAAGCCAGCTCCAAGCCACAATGCTGCATCTGATCCagACTGACAGCTCATTCCTGGACAGCATCTATGAAGCCTACATCAGCCGCTTTGCTAATGACTCCAGCAGCAAGTACTGATGACTCTTCACACTCTCTGTCTGTACATGCACCCTGTCTTGAGCTGTGAGGCAATTCTTCTACACCTAATATGGATGTACCATTTCCTCTTCTGAATCCAATCAGACACACTGCTCTGTATCTCCTCTGCACTACATACCCAGTCAACCTGACTCTTCCTCTTTAAACCAAGTTTCTGTAGTCACAACAAAAAAAGCAGTTATCAGATTATACATGTTTGTTTCCATATCAAAAAACTTGTTTTATCCTCTGAATCCTCTTGAAAAAGAAATTCTCTCAATCTGAGGACCACTAATTTTTGGGCACAAATGCGGCATGACCATACAGTCTTGACATCATCTGTAGTTAAGGGGACAATGTAGCCTATACTCTCGTTCACTCTACATGAAGACAAAATATGCTGCAACCCCATGTTTTGCCTAAGTATTTGAATATAGTTCCCttcactgttttttattcaCCAAACTTAGCagaattataattatattttttgtttttcttttgttataaTGTGTAGTCTTTACTCCGTCACAGTGGTCTAACACCAGCCAGCCTTCTGGGCTTTAATAAACAAGTCTTCCTTGTCTAAGAACTAGTGCTGAAGGATATGCTCAAACTGACTTGAAACTGACTTCACCTATGAAAGGttaaacatattttgttttctgtacattttgaaaaagtatGTTTAAATGTTATAAGAATTTGTTTGATTTAAATTAAGTTCTTACTAGTTTGCCTTCTAAAGCGAGTATATTTTAGTATCCAAATCCTTTTAAAGTTATAAggattttttcaattttttcagCAGACTCTAGCTATGATTAAATATTTGTATTGGTAACAGTTGTTTTAGTTTTACGTACAgtaatgttattatattattaccaTTATGAAGAATTCAAAATGACATGGTATCCATCTAAATTGAAGTAACAAGGAAAGTACAGGAGATTGTTAACCTGCTACCTCACAGAGTTTGGAGGCGTTCGGAGTCATCCCTGTGTTTTTACTAGTAGCAGATTGTCACAGTTATGTAATTCAACAGTTTTAAAAAATTAGATAACCCAGTCAgggtttttatttcagtttaacataaAGGATTTAATCATCACAGAAAACCCATTGACAACCTTTTGAGTTGTTGTGTATATATGCCACAGTTCCTGAACAAAACAACTTACAGAAATTCCCCTCAGGATTAATACAACTTTTTATTGATCAAACGCTTTGCTATTGATGGTAAGTTTAGTTAAATAGATGCTTGGTAAATGGAGATTTAAAGCAATAAAAAGCAGCAAAGAAGGTATATAAATATCTGATAATAATTGTTTGGAATTCACAGGCCTGTTCAAAGCAAGTACAATAGAAATATATgatagaaaatgcatttccgaAATACTGTCACGCTACATGTACTGCATAAAGTGTCACCCAATCAAACTAAGGCTCCCACACATTTCCTTACTTACTACAGCAGAGAAGTCAGTCAATATGTTAAATTTCGTCAGGGTTAGGGTTTGCACTTTGTGCTAAACTCGTATAAAGCCAGACTATATAGTAGCTACCAGAGAGTACAcaaaaacagcagcaacaacagagagagaTTACATTTCAGGAAACTAAAaaacagaatattttttttcctatttttgtACTCAAGCAAAATGTATTGTTCCCATAGTACAGATAACCAGCATGTTACATTACAATTAAATGTACAGCAAGTACAAAATAATTCTTATACAACATATCTAAAGTTATTTGTTAGAtgctgttttgttattttaatttaaaaagatgtcatccgtagtctttttatttttattttttaaatttgtcatTTAAAATAATACGATAATGGAAACATTTTtacacgttttatttctttttgacgGAAATGTTTTGCTCTTTCATAAACTGAAGTCTATTTTA

Function

NR:

description
PREDICTED: mRNA-decapping enzyme 1B-like

GO: NA

KEGG:

id description
K12611 DCP1B; mRNA-decapping enzyme 1B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791503.1 True 4159 mRNA 0.43 10 13339059 13353840

Neighbor

gene id symbol gene type direction distance location
LOC120553267 LOC103372592,LOC104942102 coding upstream 213244 13121512 ~ 13125815 (+)
klhdc10 klhdc10,LOC102781502 coding upstream 256815 13077157 ~ 13082244 (+)
chchd3a LOC103366397 coding upstream 704178 12561350 ~ 12634881 (+)
mest mest coding upstream 1022941 12308833 ~ 12316118 (+)
atp2b1a atp2b1,LOC103370548 coding upstream 1034684 12260069 ~ 12304375 (+)
cacna2d4a cacna2d4,LOC102201998 coding downstream 5047 13358887 ~ 13443536 (+)
cpsf6 cpsf6 coding downstream 90744 13444584 ~ 13474258 (+)
napepld NA coding downstream 125887 13479727 ~ 13490419 (+)
LOC120553484 ninj2,LOC103459309,LOC106521792 coding downstream 277111 13630951 ~ 13659234 (+)
LOC120553479 NA coding downstream 307110 13660950 ~ 13667737 (+)
G227510 zc3hc1 non-coding upstream 263711 13071545 ~ 13075348 (+)
G227499 NA non-coding upstream 296041 12987713 ~ 13043018 (+)
G227363 NA non-coding upstream 1095304 12243534 ~ 12243755 (+)
G227338 iqsec3 non-coding upstream 1346107 11990100 ~ 11992952 (+)
G227267 NA non-coding upstream 1711116 11624235 ~ 11627943 (+)
G227639 NA non-coding downstream 139561 13493401 ~ 13493861 (+)
G227646 NA non-coding downstream 162642 13516482 ~ 13531547 (+)
G227662 NA non-coding downstream 200410 13554250 ~ 13554826 (+)
G227734 NA non-coding downstream 602857 13956697 ~ 13965492 (+)
G227736 phtf2 non-coding downstream 613703 13967543 ~ 13969687 (+)
nrf1 nrf1,LOC103372774 other upstream 316112 13005339 ~ 13022947 (+)
plxna4 plxna4 other upstream 428870 12659268 ~ 12910189 (+)
st8sia1 st8sia1 other upstream 1212514 12106952 ~ 12126545 (+)
G227278 LOC104928793 other upstream 1581742 11689169 ~ 11757317 (+)
G227216 NA other upstream 2226154 11102836 ~ 11112905 (+)
yeats4 yeats4 other downstream 120709 13474549 ~ 13479115 (+)
LOC120553473 LOC102193240,LOC101463811,LOC103146510,LOC103459282,LOC106521789,LOC108235098 other downstream 320964 13674804 ~ 13798380 (+)
trnak-cuu_11 NA other downstream 415215 13769055 ~ 13769127 (+)
trnal-caa_20 NA other downstream 416226 13770066 ~ 13770177 (+)
trnak-cuu_12 NA other downstream 421147 13774987 ~ 13775059 (+)

Expression


Co-expression Network