LOC120553270


Basic Information

Item Value
gene id LOC120553270
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 6976332 ~ 6995588 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791514.1
GAACACTGTTCATGTGCAGTTGGATTCTCCTTGCGCCGCGGTTGTCTTTTCCAAGTGAATTCTCCTTCAGATCTTTCCCTGACCccgtgacgtgacgtgacgttTACCAAGGAGAAGTGACAATTATCAACCATGTCCAACACTGTGGCTCCGATGCTCTCTGTGTTCCCCAGTCGGGCTCTGGTCGATGAGAATTTCAAGGTGGTGGTGAAGAATCTGCCTCCGGGATGTCCAGTGACACTTCACTCCCTCCACCAGTGTGAGGACAAGTACTACTGGGAGGCCTACGGCCACTACACCAGTAATCACAGAGGAACCGTGTCTGTTACAGATGATTTGAGTTTTGGGGGAACGTACACAGGAAAAGAAGCCATGGGTTTGTTGTGGAGTATGCGTCCCGTCCCAGGCAGCCGTGAAGGCCTCAGgttgaggaggaggaACGTCTGCAGCCCCCTGCTGGTCAACATCTCCGTCTACAGGGGACATGTAGTGGAGGGCTTCAGGGAGCAGGCTCCTCTGGCCTCGTCGCTCACAGAGAGATGGTACATGGCTCCAGGGGTCCAGAGGATCCAAATCAGAGAGAAGGGAGTGCGAGGGACTCTGTTTCTACCTCCAGGTCCAGGTCCCTTCCCCGGTATGTTGGATATGTGGGGGGGTGGTGGAGGGCTGGTGGAGTATCGTTCAGCCCTGCTGGGGTCTCATGGTTATGCTTCTTTGGCGCTGGAGTATTTTGCCCCTGGGGAGATGAAGTCGGCAGACTTCGAGTTCAACTATTTTGAGACAGCATTTAATATCGTGAAATACCATCCTCAAGTGATGCCGGACAAAGTTGGAATTTTTGGTCTTTCCCTCGGCGCTGTTTTGACCATTCTGTTGGCAGCGGAGAGCAGCGTTATCAAGCCTTCCTGTTGTGTTTGTATCAGCGGCAACCACCTTTTTCCACGGGGGATGACCATCAAAGAAGCATTGAACATGAAATCTCCCAAGATACGCCTGGATGAGAACAACTATGAGATATGGCGAGATATGGGTCTACCGATTCCTGATGATCCCACACACAAAATAGACGTGGGGAGAATAAACTGTCCAATTATGTTGGTGAACGGCCATGATGATCAGAACTGGGCCACAGTGGAGTCTGCTGACGATATGGCCCAGATGATGCGTGCAGCAGGGAACCTGCACCTGCTGACCAGACTTCACTACCCTGATGCTGGACATCTGATTGAGCCGCCATACACACCTCACTTCAGAGCTACTAAGTTTGTAAAGGACACAAAAGAGAAAGTGATATTGCTGTGGGGAGGACAGACCAAACCCCATTCAGATGCTCAGGAAGACTCCTGGAAGAATATCTTGGCTTTTCTGGAGCAGAATCTGTACTCCAGCCCAACTCTCAAAGCCAAGATGTGAATGACTACACAAGCACAGATCGCCAACGTATCACTGCTGGAACACAGAGTGTTGTGTGACTGGGCCATGTTAGTACATTAACACTACTGTTCATTGGTTCCTCACTGTGTTGACCACGTGCCTTTCTTCTGATCAGCTGAGGTTGTTCGTTTTGTTCAAATTGTGCCTCTTCATTCCGAGCAATACATTTTAGTTTAATTATCTGCAAGCCTCAACCTTTGACACAGTGGcgatttctttaagactgcaagGGAAGCTCAGCTTCCCTTAAAATGTCTACAATTtaatggtcaaatatgtactattgtgttaacattttattgactaaaatgCGTTAGAATACGTTCATCTCGAAGACGAGTTTGTTCACAATTGGCTGACTCGATTTCCTTCTCATACATTCCCGTAGCGCCTCAGTGCATTTCCCTGTTGAACCcataggctacatttagtaaaCCACTTTGTAAACTATTTCCTGGAGTGCTACAATCTCTATCATTATTTATTACCTTATAttcaggggttaaattgggatttGTTTCGCCtgggaaattattttttgaaaaataaaccattaaatggcacttttCT
>XM_039791515.1
GGAAAGTGTGTTGAAAGGTATAAAGTCCAGAAAGCAGCAGATTAACAGATTTCTCTGAGCCCTCGTGGACCTGTTGGGAACGTGTGTCTAACTCAACAATTATCAACCATGTCCAACACTGTGGCTCCGATGCTCTCTGTGTTCCCCAGTCGGGCTCTGGTCGATGAGAATTTCAAGGTGGTGGTGAAGAATCTGCCTCCGGGATGTCCAGTGACACTTCACTCCCTCCACCAGTGTGAGGACAAGTACTACTGGGAGGCCTACGGCCACTACACCAGTAATCACAGAGGAACCGTGTCTGTTACAGATGATTTGAGTTTTGGGGGAACGTACACAGGAAAAGAAGCCATGGGTTTGTTGTGGAGTATGCGTCCCGTCCCAGGCAGCCGTGAAGGCCTCAGgttgaggaggaggaACGTCTGCAGCCCCCTGCTGGTCAACATCTCCGTCTACAGGGGACATGTAGTGGAGGGCTTCAGGGAGCAGGCTCCTCTGGCCTCGTCGCTCACAGAGAGATGGTACATGGCTCCAGGGGTCCAGAGGATCCAAATCAGAGAGAAGGGAGTGCGAGGGACTCTGTTTCTACCTCCAGGTCCAGGTCCCTTCCCCGGTATGTTGGATATGTGGGGGGGTGGTGGAGGGCTGGTGGAGTATCGTTCAGCCCTGCTGGGGTCTCATGGTTATGCTTCTTTGGCGCTGGAGTATTTTGCCCCTGGGGAGATGAAGTCGGCAGACTTCGAGTTCAACTATTTTGAGACAGCATTTAATATCGTGAAATACCATCCTCAAGTGATGCCGGACAAAGTTGGAATTTTTGGTCTTTCCCTCGGCGCTGTTTTGACCATTCTGTTGGCAGCGGAGAGCAGCGTTATCAAGCCTTCCTGTTGTGTTTGTATCAGCGGCAACCACCTTTTTCCACGGGGGATGACCATCAAAGAAGCATTGAACATGAAATCTCCCAAGATACGCCTGGATGAGAACAACTATGAGATATGGCGAGATATGGGTCTACCGATTCCTGATGATCCCACACACAAAATAGACGTGGGGAGAATAAACTGTCCAATTATGTTGGTGAACGGCCATGATGATCAGAACTGGGCCACAGTGGAGTCTGCTGACGATATGGCCCAGATGATGCGTGCAGCAGGGAACCTGCACCTGCTGACCAGACTTCACTACCCTGATGCTGGACATCTGATTGAGCCGCCATACACACCTCACTTCAGAGCTACTAAGTTTGTAAAGGACACAAAAGAGAAAGTGATATTGCTGTGGGGAGGACAGACCAAACCCCATTCAGATGCTCAGGAAGACTCCTGGAAGAATATCTTGGCTTTTCTGGAGCAGAATCTGTACTCCAGCCCAACTCTCAAAGCCAAGATGTGAATGACTACACAAGCACAGATCGCCAACGTATCACTGCTGGAACACAGAGTGTTGTGTGACTGGGCCATGTTAGTACATTAACACTACTGTTCATTGGTTCCTCACTGTGTTGACCACGTGCCTTTCTTCTGATCAGCTGAGGTTGTTCGTTTTGTTCAAATTGTGCCTCTTCATTCCGAGCAATACATTTTAGTTTAATTATCTGCAAGCCTCAACCTTTGACACAGTGGcgatttctttaagactgcaagGGAAGCTCAGCTTCCCTTAAAATGTCTACAATTtaatggtcaaatatgtactattgtgttaacattttattgactaaaatgCGTTAGAATACGTTCATCTCGAAGACGAGTTTGTTCACAATTGGCTGACTCGATTTCCTTCTCATACATTCCCGTAGCGCCTCAGTGCATTTCCCTGTTGAACCcataggctacatttagtaaaCCACTTTGTAAACTATTTCCTGGAGTGCTACAATCTCTATCATTATTTATTACCTTATAttcaggggttaaattgggatttGTTTCGCCtgggaaattattttttgaaaaataaaccattaaatggcacttttCT
>XM_039791516.1
AAAACATACACCAAGGAGGACATTTGTTTTTGACTTTTCGACCGCAGAGCATACACAGTTCTCACCAGACAGAGGAACAGACCGCCTGCAAACCTCAAACGACGACTGGAACTTTGTGTCTGCGCAAGATCACTCACAATTATCAACCATGTCCAACACTGTGGCTCCGATGCTCTCTGTGTTCCCCAGTCGGGCTCTGGTCGATGAGAATTTCAAGGTGGTGGTGAAGAATCTGCCTCCGGGATGTCCAGTGACACTTCACTCCCTCCACCAGTGTGAGGACAAGTACTACTGGGAGGCCTACGGCCACTACACCAGTAATCACAGAGGAACCGTGTCTGTTACAGATGATTTGAGTTTTGGGGGAACGTACACAGGAAAAGAAGCCATGGGTTTGTTGTGGAGTATGCGTCCCGTCCCAGGCAGCCGTGAAGGCCTCAGgttgaggaggaggaACGTCTGCAGCCCCCTGCTGGTCAACATCTCCGTCTACAGGGGACATGTAGTGGAGGGCTTCAGGGAGCAGGCTCCTCTGGCCTCGTCGCTCACAGAGAGATGGTACATGGCTCCAGGGGTCCAGAGGATCCAAATCAGAGAGAAGGGAGTGCGAGGGACTCTGTTTCTACCTCCAGGTCCAGGTCCCTTCCCCGGTATGTTGGATATGTGGGGGGGTGGTGGAGGGCTGGTGGAGTATCGTTCAGCCCTGCTGGGGTCTCATGGTTATGCTTCTTTGGCGCTGGAGTATTTTGCCCCTGGGGAGATGAAGTCGGCAGACTTCGAGTTCAACTATTTTGAGACAGCATTTAATATCGTGAAATACCATCCTCAAGTGATGCCGGACAAAGTTGGAATTTTTGGTCTTTCCCTCGGCGCTGTTTTGACCATTCTGTTGGCAGCGGAGAGCAGCGTTATCAAGCCTTCCTGTTGTGTTTGTATCAGCGGCAACCACCTTTTTCCACGGGGGATGACCATCAAAGAAGCATTGAACATGAAATCTCCCAAGATACGCCTGGATGAGAACAACTATGAGATATGGCGAGATATGGGTCTACCGATTCCTGATGATCCCACACACAAAATAGACGTGGGGAGAATAAACTGTCCAATTATGTTGGTGAACGGCCATGATGATCAGAACTGGGCCACAGTGGAGTCTGCTGACGATATGGCCCAGATGATGCGTGCAGCAGGGAACCTGCACCTGCTGACCAGACTTCACTACCCTGATGCTGGACATCTGATTGAGCCGCCATACACACCTCACTTCAGAGCTACTAAGTTTGTAAAGGACACAAAAGAGAAAGTGATATTGCTGTGGGGAGGACAGACCAAACCCCATTCAGATGCTCAGGAAGACTCCTGGAAGAATATCTTGGCTTTTCTGGAGCAGAATCTGTACTCCAGCCCAACTCTCAAAGCCAAGATGTGAATGACTACACAAGCACAGATCGCCAACGTATCACTGCTGGAACACAGAGTGTTGTGTGACTGGGCCATGTTAGTACATTAACACTACTGTTCATTGGTTCCTCACTGTGTTGACCACGTGCCTTTCTTCTGATCAGCTGAGGTTGTTCGTTTTGTTCAAATTGTGCCTCTTCATTCCGAGCAATACATTTTAGTTTAATTATCTGCAAGCCTCAACCTTTGACACAGTGGcgatttctttaagactgcaagGGAAGCTCAGCTTCCCTTAAAATGTCTACAATTtaatggtcaaatatgtactattgtgttaacattttattgactaaaatgCGTTAGAATACGTTCATCTCGAAGACGAGTTTGTTCACAATTGGCTGACTCGATTTCCTTCTCATACATTCCCGTAGCGCCTCAGTGCATTTCCCTGTTGAACCcataggctacatttagtaaaCCACTTTGTAAACTATTTCCTGGAGTGCTACAATCTCTATCATTATTTATTACCTTATAttcaggggttaaattgggatttGTTTCGCCtgggaaattattttttgaaaaataaaccattaaatggcacttttCT

Function

GO:

id name namespace
GO:0006637 acyl-CoA metabolic process biological_process
GO:0016790 thiolester hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791514.1 False 2004 mRNA 0.48 11 6978111 6995588
XM_039791515.1 False 1980 mRNA 0.47 11 6976332 6995588
XM_039791516.1 True 2020 mRNA 0.47 11 6978236 6995588

Neighbor

gene id symbol gene type direction distance location
gnsa gns,LOC102788091 coding upstream 241923 6719108 ~ 6734409 (+)
sfmbt2 sfmbt2 coding upstream 339651 6579112 ~ 6636681 (+)
itih5 itih5 coding upstream 423246 6535175 ~ 6553086 (+)
kin kin,LOC103372864 coding upstream 456880 6513845 ~ 6519452 (+)
echdc3 echdc3,LOC102797483 coding upstream 1577029 5393640 ~ 5399303 (+)
cd9b LOC103364503,LOC102202019,LOC101471915,LOC102790892,LOC100690342,LOC102311668 coding downstream 56267 7051855 ~ 7073003 (+)
dclre1c dclre1c,LOC106595997 coding downstream 93752 7089340 ~ 7100004 (+)
lamb1b lamb1,LOC103364103 coding downstream 120374 7115962 ~ 7144005 (+)
trnaw-cca_35 NA coding downstream 151681 7147269 ~ 7147340 (+)
vezt vezt coding downstream 245264 7240852 ~ 7255885 (+)
LOC120553621 NA non-coding upstream 475272 6429094 ~ 6501060 (+)
LOC120553126 NA non-coding upstream 686433 6183044 ~ 6289899 (+)
G226097 NA non-coding upstream 878424 6097678 ~ 6097908 (+)
G226085 NA non-coding upstream 1056918 5919094 ~ 5919414 (+)
G226042 NA non-coding upstream 1199899 5750128 ~ 5776433 (+)
G226292 eri1,LOC102785739 non-coding downstream 161902 7157490 ~ 7157887 (+)
G226306 ndufa12 non-coding downstream 217804 7213392 ~ 7216386 (+)
G226316 NA non-coding downstream 271921 7267509 ~ 7268758 (+)
G226317 NA non-coding downstream 273516 7269104 ~ 7270753 (+)
G226318 NA non-coding downstream 275729 7271317 ~ 7271707 (+)
prkcq prkcq,LOC102789446 other upstream 289693 6660520 ~ 6686639 (+)
abcc9 abcc9,LOC107387088 other upstream 1602695 5281258 ~ 5373637 (+)
G225894 NA other upstream 2318363 4657444 ~ 4657969 (+)
LOC120553793 NA other upstream 3037378 3935674 ~ 3938954 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other upstream 3135158 3814481 ~ 3841174 (+)
snrpf snrpf,LOC106576293 other downstream 322929 7318517 ~ 7321189 (+)
amdhd1 amdhd1 other downstream 327482 7323070 ~ 7332259 (+)
klhl42 klhl42 other downstream 367737 7363325 ~ 7368216 (+)
nrip2 LOC102781986,LOC100711207,LOC102191975 other downstream 374854 7370442 ~ 7400399 (+)
ascl1a ascl1 other downstream 428030 7423618 ~ 7426254 (+)

Expression


Co-expression Network