acss3 (acss3)


Basic Information

Item Value
gene id acss3
gene name acss3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 8515588 ~ 8565355 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791529.1
AGTTCATAGTGCGCATTCCTTGTGGGTATTGTTGATTTCTCCAAGGAGGCTTCCCTCCCTTTACGTGACCCCGGATGACGTAGCTCAGAATTGAATGGTAGAAGCGGGTCTTTCACTTGCAGGAAAACACGCGTGAAAGTTTACCTTTTAAAATAACTACAGCAGCGATGCACTTTCAACTAAAACATCTACTGCGCCTGAACCGCTGCGTGTCTGTTCAGCGCAAGAGGACACTCGGGAAGACTCTGTGGGCTGTGTCCGCAGCAAAACAACGTGGCGTTAGACAAGCAGGATCGCATGCATCTGCAGACATCGGGAAGTATTTCGCCCTGCAGTGCAGCAGAAGCTATGCATCCGACACGGCGTACGAGCGAGCCTTCGCTGCAGCCAGGGACAAGCCCGAGGCATTCTGGGGTGAGGTGGGACAGGATATCAACTGGTTTGAGCCGTGGAGTAAAACTTTGCACGTTGAGGATCCAGTGTTTCCAAACTGGTTTGTTGGAGGGAAGTTGAACATGTGCTACAATGCTGTGGATCGTCATGTAGAGAGCGGCCGTGGAGAACAGCCTGCCATCATTTATGACAGCCCAGTGACTGGAACTAAACAGATCATCACTTTCAGGGAACTTCAGGACCAGGTGTCCAGGTTAGCAGGGGTCTTAGCGAAGTATGGGGTCCGGAAAGGAGACCTGGTAGTCATCTACATGCCTATGGTGCCACAAGCCATGTTCACCATGTTGGCCTGTGCCCGGATTGGTGCCCCCCACAGCCTTATCTTTGGCGGCTTCGCTTCCAAAGAGCTTTCTGTCCGCATTGATCATGCCAAGCCCAAGCTGATGGTTACAGCCTCATTTGGCATCGAGCCAGGCAGAAGAGTGGAGTACATCCCTCTGGTGAAGAAGGCCTTGGAGCTGAGCTCTTACAGGCCCTCTAAAGTCCTCATCTACAACAGGCCTAACATGgAAAAAGTACCAATGAGTCCGGAGTTGGGTCTGGACTGGGAGGAAGAGATGGCCACAGCTCGGCCGCATGACTGTGTTTCTGTTCCCTCCAACCACCCTCTCTACGTCCTCTATACATCCGGCACCACTGGAACACCAAAGGGTGTTGTGCGAGACACTGCAGGCTATGCCGTGATGCTGAAATGGACCATGTCAAATATTTATGGACTCAGTCCTGGAGATGTTTGGTGGGCAGCGTCAGACCTGGGCTGGGTGGTCGGCCATTCATACATCTGCTACGGTCCTCTGCTCCATGGTAACAGCACTGTTCTCTATGAGGGTAAACCTGTGGGGACTCCAGACCCTGGGGCGTTCTTCCGTGTCCTATCTGAACACGGTGCCACCTCCTTGTTCACAGCACCCACCGCCATCCGAGCCATTCGCCAGCAGGACCCCCATGCTGCAGTTGGGAAAAAATACCCCCTGTCCAGGTTGCGGTCATTATTTCTGGCAGGAGAGCGATGTGATGTGGAGACGCTGGAATGGGCAAAGAGGAGCTTTGGGGTTCCTGTCCTGGATCACTGGTGGCAGACGGAAACTGGCTCACCTATCACCTCCTCCTGTATCGGTCTGGGGAACTCGCTCACGCCACCTGCAGGTCAGGCTGGCAAACCTGTTCCGGGTTACAACGTCACAGTGATCGATGATGACATGCAGGAGGTGAAACCAAGAACTCTGGGAAATATTGTGGTGAGACTACCTTTACCACCTGGTGCAGCTTTGTCACTGTGGCAGAACCACAATCTGTTCACTAAGCTCTACTTCACCAAGTTCCCAGGTTACTATGACACTATGGATGCAGGTTTTGTGGATGACGAGGGTTTCCTTTACATCATGTCCCGgtctgatgatgtcatcaacGTGGCAGGCCACAGGCTGTCAGCTGGAGCATTGGAGGAGtcAGTGCTGCTGCACCCTGCAGTGGGAGACTGTGCTGTGGTGGGTCTAGAAGACACTCTGAAGGGTCTTGTTCCATTAGCCCTGTGTGTACTCAAGAATGgTGTGCAGAAAAATGAAGAAGAGATCATAAATGAGATGGTGAAGCTTGTAAGAGACACCATCGGACCCGTGGCTGCCTTTAGGAAAGTGATTTTTGTCCGAGGATTGCCGAAGACGCGCTCTGGCAAAATCCCTCGCTCCTCTTTAGCCAACCTGGTCAACGGCAAGCCCTACAAGATCACTCCAACCATCGAGGATCCAGAAGTCTTCAAAGACATCGAAAGGCAGGTAGAAAAAGCTCTGAGCACTCGCTGAGCCTGAACTCACTCCAGGTGCTGCAAATTTAAACTAAAATGTGTGAACCTTCTTATAAGTCAAGTTGAAGGTAGACCTCGATGTCAGTAAGTTTTACAGGGCTAATATTTCCATTTGTATGTAACCTGAAACTATACTGCATAGTCATAATTAATGAGCAGAGGCAAGGTACGGCTACTGTAAGTATAAAATAATGCCCTTGAGCCATAAACATGTTGAATGGAGAAATAATGAAGAAAACTCATTTACTGAcagtagttttctttttttttattgacaatgAAAATTTGCTTGCTCACCACTTAGTTTTGACCGAAGTACAagaagtaataaataaaaaaatggacacaaaataaaa

Function

symbol description
acss3 Predicted to enable propionate-CoA ligase activity. Orthologous to human ACSS3 (acyl-CoA synthetase short chain family member 3).

NR:

description
PREDICTED: acyl-CoA synthetase short-chain family member 3, mitochondrial

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K01908 ACSS3, prpE; propionyl-CoA synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791529.1 True 2613 mRNA 0.50 16 8515588 8565355

Neighbor

gene id symbol gene type direction distance location
myf5 myf5 coding upstream 44554 8468661 ~ 8471034 (+)
myf6 myf6 coding upstream 51494 8462324 ~ 8464094 (+)
ppfibp1a LOC103362093,LOC102299773,LOC102192229 coding upstream 502777 7978077 ~ 8012811 (+)
tnnt2c LOC102777397 coding upstream 618105 7895545 ~ 7897483 (+)
LOC120553463 LOC103356656 coding upstream 628063 7869761 ~ 7887525 (+)
washc3 ccdc53 coding downstream 237193 8802548 ~ 8807170 (+)
gnptab gnptab coding downstream 253215 8818570 ~ 8845025 (+)
atp6v1e1b LOC100708725,LOC104926722,LOC103358108,LOC106937970,LOC103156918,LOC106914460 coding downstream 352879 8918234 ~ 8926796 (+)
LOC120553730 LOC103358107,LOC100702291,LOC101477928 coding downstream 361717 8927072 ~ 8932977 (+)
LOC120553653 fgf6,LOC100708453,LOC101478942,LOC103358103 coding downstream 441203 9006558 ~ 9010187 (+)
G226554 NA non-coding upstream 106929 8341630 ~ 8408659 (+)
G226556 ppp1r12a non-coding upstream 156306 8356330 ~ 8359282 (+)
G226515 NA non-coding upstream 208760 8260333 ~ 8306828 (+)
G226507 syt1,LOC106518246,LOC100695586 non-coding upstream 457971 8047779 ~ 8057617 (+)
G226505 NA non-coding upstream 486927 8024361 ~ 8028661 (+)
LOC120553277 NA non-coding downstream 52459 8617814 ~ 8620495 (+)
G226638 NA non-coding downstream 304663 8870018 ~ 8870711 (+)
G226641 mybpc1 non-coding downstream 316462 8881817 ~ 8883677 (+)
G226720 NA non-coding downstream 369695 8935050 ~ 8935551 (+)
LOC120553611 NA non-coding downstream 376486 8941841 ~ 8943537 (+)
rps16 rps16,LOC103382554 other upstream 82891 8426635 ~ 8432697 (+)
LOC120553156 LOC104945813 other upstream 946285 7566655 ~ 7569303 (+)
LOC120553154 LOC104945813,LOC103356648 other upstream 983511 7525892 ~ 7532077 (+)
ascl1a ascl1 other upstream 1089334 7423618 ~ 7426254 (+)
nrip2 LOC102781986,LOC100711207,LOC102191975 other upstream 1115189 7370442 ~ 7400399 (+)
lhfpl3 lhfpl3,LOC101483460 other downstream 569239 9134594 ~ 9173220 (+)
ndufb2 ndufb2,LOC102790702 other downstream 671871 9237226 ~ 9241349 (+)
G227121 kera other downstream 2131899 10697254 ~ 10699718 (+)
G227141 dcn,LOC103382665 other downstream 2166714 10732069 ~ 10737503 (+)
impdh1b LOC104968094,LOC103355171,LOC102293685,LOC102194436,LOC104918784 other downstream 2382930 10948285 ~ 10986201 (+)

Expression


Co-expression Network