cdkn1d


Basic Information

Item Value
gene id cdkn1d
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 17000945 ~ 17005314 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791556.1
CTATAACCGCCTCTGCCTATACTAGGACCATAGAGGACGTCCCCGCTGTCTTTTGAGTTCATAACAAACAAGTCGCAGATAAAGGGTCAAGGACGACCCTCCCGTGGGTGGTGCCTATATGCTCAACGTGACAGTCTGTTTCCACGGAGCTGTCAGGAACACATATCACTCCTCCGACTGGATGAATTGTGCGGAGTGTGGGGACGAAACGCTCGAGACGTGAAACTCAACTTTTGAATAGCCTACTTTTGAGATATTGACGCTGATGGGATATGGCGATGGCTTCTCCATCGGCATCACCAGCAGGACCAGCTACGGAGGCATCCAACCCAGAGCTCTCACGCCGGGGGTGCATTGAGGCTTTGAAATTGAAGGTGGGGCCGGCGCGGAGAAACCTCTTCGGGCCTGTGGACcaccagcagctgcagcaggacTTCCAGCGGCTGCTCTGTATGGACGTGGAGGTGGCCAACAAGCGCTGGAACTTTGATTTCCAGAGAGAAATGCCAGAAGAGGGCTCCGACTTGGAGTGGGAGGAGCTCAGTTACGAGGACGTGCCGGCGTTTTACCACAGCTGCACGGTTAGGTCAGCGCAATGTCCAGTGGCCAAGAGGCGGGCATCGTCTTCGTCGGGCAAGTGTTCCCCAGGGTCCAGCAGCACGTCCGAGTCTGGGGATGAGTACCTGGAGGTGACCACAAGGGGGTGCTACCGGATCCGACGGCAAGGAAAACGTAAACAGTCTGCCATCACAGATTTCTTCAAGGTGAAGAAGATGAAGCTTCTGCATTACAAAGCATCTTCTCTGCAGTAGAAAAGCACAACGTAGACCCAGTGGAGGACCACCAAGTGGTCGACATCCCTCTACACGTAACCTCACATAGATATGTGTCATatcatatgtatatatgtagcaATTTGTAACGGACTGTCCACCAGCTCATTCAGCATGGGCTCAAAAACACCTCTGACACCACATACCTTAGATTTTCAGCACAAGGAAGCTAGCATGATCCTAGTTAATCAAGCTCAGACCTTAGGAACGGTTTTTGTTTaactataaatattatatatattctatatactgttttcatcattttttttttttttttaactatactGTGAAATTATTTTTGAATGCAGACTCTTAATAACAGAAAACGGGCTCCAGTTTTAAGAGGTTAATTGTCTTCTGAGCGGCCTGCGGCTAGTATTTGACGTCAGTCCTCTGGCCTTTCTTCTCCCTCTTGCTAAAAGTCACGAGATGGTTTTGATTAGATGAGTTGCTATTCCTGGTTTGCACCACACTTAGCCTTTAGTCTCGCCCCAGGGCTCTGATAGCAGGAGTCAAGTCAGGGGTCAAAACCTCACCCGGGGCTCAAAATGTGGCAGCGCGACTGTGATTAGTTCCGGGGCAAAGGTCAACGGTGGAGGTTCAGCAATAAGGTAACGTGGCAGTACCTGTACAACAGTGACTTCTATTCTtatgtgattatttatttatcattcgTGATGCTAGAtcgtcaaaaaaaataaaaaaagataattagAAAAAATTGGATGTGTAAAGCAAGGCAACATAAGCTGTTTAGAAGTCATTATGGGTCATATATACGCTCCACCGTTGTCACTTAATAATAttggccatatatatatatacatttaacacCATCACAACGAAAAATGTACAAACTACAAATCATATCCCCTTTTTGGTTTGCATTATTTGCATATTGGGGCTGTACAAAGTACAAATCTATACTTTTTTTGGCAACAGACTACAACATTACTTTATTTCGTTTTGTCAGCTTTATGCTTGTAATGATGTAGACATCTTCCACTCTTTGTCTTCATGTCCACCTTGGAGTTGTTAAATACACCCATTTTCTCTATGAAGCAAGTGTAGCGTTTTGTCCCCATGTTGCAGCTCAGAGGAACCCTAACCTTTCAGTTCCACTTTTggtcgtttttttctttttttctttatgaaGAGTTGAgctgcttctcttttttttgtctctttgtcgtTCTATAAATGTTAGTGTGTACATAATAACAAGTGTTTGTGTA

Function

NR:

description
cyclin-dependent kinase inhibitor 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791556.1 True 2068 mRNA 0.45 3 17000945 17005314

Neighbor

gene id symbol gene type direction distance location
LOC120553739 ascl4,LOC103372058 coding upstream 20188 16980006 ~ 16980757 (+)
tnnt2e NA coding upstream 146071 16833664 ~ 16854874 (+)
dock4b NA coding upstream 527272 16358792 ~ 16473673 (+)
gpr85 gpr85,LOC106576049 coding upstream 780360 16216041 ~ 16220585 (+)
LOC120553010 NA coding upstream 787068 16213082 ~ 16213877 (+)
LOC120553296 LOC103372063 coding downstream 16578 17021892 ~ 17032722 (+)
wnt7ba wnt7b,LOC106575957 coding downstream 182872 17188186 ~ 17196857 (+)
LOC120553078 LOC104966316,LOC103366982,LOC104933494 coding downstream 228698 17234012 ~ 17237437 (+)
kdm5a NA coding downstream 232621 17237935 ~ 17260868 (+)
LOC120553077 LOC107383981,LOC106521814 coding downstream 257332 17262646 ~ 17275457 (+)
G228326 LOC106583082,LOC106565661 non-coding upstream 81374 16917000 ~ 16919571 (+)
G228328 strip2 non-coding upstream 113382 16882838 ~ 16887563 (+)
G228272 NA non-coding upstream 168824 16831604 ~ 16832121 (+)
G228276 NA non-coding upstream 388240 16612502 ~ 16612705 (+)
G228275 NA non-coding upstream 434807 16565665 ~ 16566138 (+)
G228353 NA non-coding downstream 2488 17007802 ~ 17010730 (+)
G228354 NA non-coding downstream 8367 17013681 ~ 17014664 (+)
G228355 NA non-coding downstream 9764 17015078 ~ 17015306 (+)
G228356 NA non-coding downstream 12231 17017545 ~ 17017992 (+)
G228374 NA non-coding downstream 104454 17109768 ~ 17112423 (+)
G228335 ahcyl2,LOC103371314,LOC107725924,LOC107656398 other upstream 78122 16919663 ~ 16922823 (+)
morn2 morn2 other upstream 84017 16880276 ~ 16916928 (+)
stmp1 NA other upstream 133149 16866310 ~ 16867796 (+)
cald1a LOC102212027,LOC102781594,LOC102298269,LOC103382882,LOC106941466,LOC103156466,LOC101472471,LOC106916645,LOC106525550,LOC107395349,LOC103356441 other upstream 169702 16771058 ~ 16831243 (+)
tmem168a LOC103368481 other upstream 720884 16267136 ~ 16280061 (+)
srr srr,LOC105936311,LOC103459528 other downstream 1524822 18530136 ~ 18533114 (+)
LOC120553630 muc19 other downstream 1817518 18822832 ~ 18855314 (+)
LOC120553164 NA other downstream 2347669 19352983 ~ 19355551 (+)
G228784 LOC103359233,LOC104943309,LOC100709697 other downstream 2405176 19410490 ~ 19413704 (+)
LOC120553210 LOC104943308 other downstream 2626623 19631937 ~ 19839382 (+)

Expression


Co-expression Network