LOC120553296 (LOC103372063)


Basic Information

Item Value
gene id LOC120553296
gene name LOC103372063
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 17021892 ~ 17032722 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791558.1
gtgtgtgtggggagagaaagagtgaaTGAAAATTGAAGATTGgagaagagacagggagagaagtGTACAGGCTTTATTCTCTCTCAATTAAATATCCGACCACTCTCTTCAAGGCTTAAAATAAGTTAGAAAACCTATTGTAGATGGTTTAACCTGGACATACAGCACACCGTGGGAGTTTGGAGGTTATCCCAATGGATACTGTTATAGCCGCATGGGTTGCATTATGCTCCCATTTCACTAATGAACACAAGGACACTGTACGACAGAAGGAGGTGTTTAGTGATCATGGCGGCCACTAAGAGAATGACAAGCACACCGGACTGCATCTACTCCACTGTCAACAGGGTAAAGAAGGGCTGTGCTGCTGGTGAGAGAAGTGATTTCCATATTGCATTAGTGGAAAAAAAGGAAGCTGGGCAAAGAAGAGAGGGAGCACCAAAACTCCCCTTCACCCCATTAGACAACCTGAGTAACCAAGAGTCCCCCATAATGGCTTACAGGAGGCCGAGCTTTAACCCTCACAGCAATGAGAACACTCTCCTGGTGGGCAACAAGCTCCCCAGATCCAATGTAGGCAAAATAAAGGACAAGATTTCTCTGTGGGAGGGGAAGGAACCTACTCATTTACCTATTACCTCAAGTTCTTTGGGCCAGTGCTCCAGTATAAAAAGGACCGAATCACttacaaaaaacagtaaaacttCTGATGAGCAGAGTGCAGAGAGTTGCAAGAGAGTAGCCCACAAGGAAAAGGAAAATCTTGGGAAAGAGAATGTAGCGGAACTTGGGGATTCAAGGCCTTGTTCGCCCGTTGAAACCGGGAAACAGCAAAAAGGGACGCTCAAGAGCAGCAAGCCCAGTGAGTTAGAAAACAGGGAGGATTGCGGCAGAGTTGTCCACAAGGAAAAGCAAAATCATGAGAAAGAGAATGTGGAAAAGCTCGGGGATTCAAGGCCTTGTTCTCCTACAGCAGCAGTGCAGCAGCAGGTGGGCACGTTGAGGAAAAGCAATGAAAGGAGAACAGTTGAACAAACCAGCCAGGAGAAGAGAGCTGTATTCACCCTTTTTAAAAACCTGGATGCTATGAGGGAGAACCATGGGAGAACTCCTCCGGAGCTTGGAAACTACTTCAGTCCGCCTAGCAAGGAAAAACAGGTAGTTATGGGTCAAACTAGTGCAGTGAAagggaagcagcagcagcaggagaacGTGTACACAGAGCCAGGGGCGCCCCCCATCAACCCAGTCCCCAAACCACAGCGTACCTTTGAGCATCCAGCCACCGCCCCCATTGGGAAGAGTCAGAGGCTGGGGATAGAGCAGAGGAACCTCCCCCCACTGCCCTCCATCTCTAAGAAAACTTCCTCCAAACCTCCCTCTGGTGTGTACGGGAGACCCAGGGgtgagagaggcagagacaaCGTCGCCAGGAAATCCTTTGAGTTGGAAGACCTTGCAGGGTCAACTAGCCCGCTGTTCTCTCGCTCACTATCTCAGGAACATCACTATGAAGACATCCCAGACTCATCCAAAGAGAACCCATATGAGGACATAGAGCTGGAGAGTCAATGCTCCCAGCAGTCTTTGCCCTCCTCTCCTGGCGCCGATACTGCCAAGACTTCGAGGCCTGGCTTCTTTAGGCAGAATTCAGGCAGGAGCTTGAAGCTGCTGGACCTGCGGAGAACCAACCAGTCGTCCCACAGCACCAGCAGCGGGGGGGTTTCATCTCCACCCCAGCTCAGCCGTCCCTCCACTCCCACGGGCGGGGGAAAAACCCCCCGGGGCCCcccggcccccccccccccTTTTTGTTCCCAACAGGTTGTACTGAGAATCAACAGCATCTTTGATGCTCGGATCGGGAAGAAACATCTACGAAGGATCTATCATTACGCTGAGACAAGCTCAGGGAGAGTAACAGATGAGAACAGTGACTCTGAGAGTGAAGTTGAAGAAAGATCTAAAGCTCATCGTCAGCGTCAGCGTCTCGTGTCAGTCCAGTCCAAACTGAGCCAGCCAAGCAAGGCCCACTACAATGGTACCAACACCAGAAGCAGCTCTCTCGAACAGGAGCTTCACCAGCGTCTgctttttgaatattttctagttgtGTCGCTGCAGAAGTCCAAGGCTGGAGCCCACTATCTGCCCGAGGTCACACAGCAGTTCCCCCCGAAGCTGGAGCGGAGCTTCAAGTTCATGAGGGAGACGGAGGATCAGCTGAGGATCATTCCTCAGTTCTGTTTCCCTGACGCAAAAGACTGGGAGCCGGTGGAGAACTACCCAAGTGAAATGTTCTCCTTTGTTTTGACTGGAGAGGATGGAAGCAGGAGGTTTGGATACTGCCGGCGTTTACTGCCTAGTGGAAAAGGTAAACGTCTACCAGAGGTCTACTGTATTGTCAGTCACCTTGGCTGTTTCAACCTGTTCTCCAAGGTGCTGGATGAGGTGGAGAGGCGGAGGGCCTTGTCTCCGGCCCTTGTGCAGCCTTTTATGAGAGCCATCATGGAGGCTCAGTTTCCAGCTCCTGGCAGAACCATCACCATTAAAACATTCCTCCCTGGCTCAGGCACTGAAGTGATGGAGCTCTGTCGACCCTCTGACTCGCGCCTGGAGCATGTGGACTTTGAGTGTCTGTTCTCCTGTCTGAGCCTTCGCCTGCTCCTCCGGGTGTTGGGGTCTCTGCTGCTGGAGCGAAGGGTCATCTTCACAGCTGACAAACTCAGTACTCTCTCCCAGTGCTGCCATGCTGTCGTGGCGCTGCTTTACCCCTTTGTATGGCAGCACACTTACATCCCTGTGCTGCCCTCGGCCATGCTCGACATCGTCTGCACTCCAACCCCGTTCATCGTTGGCCTGCTGTCCAGCTCCCTGCCCCAGCTCACTGAGCTGCCCCTGGAGGAGGTTCTGGTTGTGGATCTTGGAAACAGTCGATTTCTCAGACAGTTGGACGATGAGGACTCCATCCTGCCTTCTAAGCTCCAATCAGCCCTGGAGAATGTtctggagaggaggagagagctcGCCAatgacagaggaggagacacacCTGGTGATTCTGGCCACCTTAGCACCGTTGTGTCCGAGGCCTTCGTTCGTTTCTTCGTGGAGCTGGTAGGCCACTATCCGCTCTTCATCACCGGCGAACGGGAAGACGGctactcctcctcttcttcctccccgGTGCCCTGCTCCTTTCAGCGCGAGGGTTTTCGTAAAGCGATTCCGTCCAAGACGGTGCGCCGCTTCCTGGAGGTCTTCATGGAGACCCAGATGTTCGGCTGGTTCATCCAGGAGAGAGAGCTGCACAGGCAGGCTCTGAGAGGACTGTTTGAAGTGAGGGTGCAGGAGTATCTAGACTCCATCCACGAGAATGAACACCGGAGGGTTAACAGGTTTCTCAAAGGCTTGGGAAACAAAATGAAATTTCTTTCCAAGAAATAATGCCGCTACAACTgcacaaaaagagacacaaactacAAAGAAGAAGCACTGAAACAAGGAAAGACTTTACTGCAGAAATCCAAATGATCATTTGagtgcttttttgtttttttaagattgttcACGCCATCCTcatctgtgtcagtgtgtgagaCTTTTGCTCAAGGACTCATGATAGACACAAGGAAACTGTGGTGAATCACAAATTGTTCCCACCAAAGGAAAATCCTGCTGTACTTCACATAAATAAAGAAACGTGGGGCTGTAGACTCAGAAATATTTAAGAGGTTCCTGGTTGTTGTGCTTTTTAAAATTCTATATTCTTCAGGCAACAACATTCCTgagaaaaaatgtataaaaagtaaaattggTCTTAGGTATACCGCTGTAAGCTACATGTGGCCGACACATTTAAGGGAAAACGTGAATATGTTAGAATGGAATGTGAATGGTTCTATTCAGGGCACAAGGGGTCGCTGAATGGTTTGATGAGTACGAAAATGAGGTAAAGGATGGTAGTCAGTCAGCCTTTGTATGCACTGTAACTGGACTTGAAAGTTCACGGTCATGGTATTTTCTGAATCCACTAGGGGGCAGAAGTATATTTTCTCTGATTCCATGATCTTGACACTACTGTCAGTGACGGaccagaaaaagacaaagacCTGCTTTCCCGCTCTTTAATGCTATACTTTTCTTTTAGTCATAACAGTGACAACATcacaagtaaataaataaaataaatatataaatattctcTG

Function

NR:

description
PREDICTED: DENN domain-containing protein 2A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791558.1 True 4208 mRNA 0.50 20 17021892 17032722

Neighbor

gene id symbol gene type direction distance location
cdkn1d NA coding upstream 16578 17000945 ~ 17005314 (+)
LOC120553739 ascl4,LOC103372058 coding upstream 41135 16980006 ~ 16980757 (+)
tnnt2e NA coding upstream 167018 16833664 ~ 16854874 (+)
dock4b NA coding upstream 548219 16358792 ~ 16473673 (+)
gpr85 gpr85,LOC106576049 coding upstream 801307 16216041 ~ 16220585 (+)
wnt7ba wnt7b,LOC106575957 coding downstream 155464 17188186 ~ 17196857 (+)
LOC120553078 LOC104966316,LOC103366982,LOC104933494 coding downstream 201290 17234012 ~ 17237437 (+)
kdm5a NA coding downstream 205213 17237935 ~ 17260868 (+)
LOC120553077 LOC107383981,LOC106521814 coding downstream 229924 17262646 ~ 17275457 (+)
LOC120553489 usp15 coding downstream 243291 17276013 ~ 17297654 (+)
G228356 NA non-coding upstream 3900 17017545 ~ 17017992 (+)
G228355 NA non-coding upstream 6586 17015078 ~ 17015306 (+)
G228354 NA non-coding upstream 7228 17013681 ~ 17014664 (+)
G228353 NA non-coding upstream 11162 17007802 ~ 17010730 (+)
G228326 LOC106583082,LOC106565661 non-coding upstream 102321 16917000 ~ 16919571 (+)
G228374 NA non-coding downstream 77046 17109768 ~ 17112423 (+)
G228375 NA non-coding downstream 81103 17113825 ~ 17115343 (+)
LOC120553376 NA non-coding downstream 86377 17119099 ~ 17120584 (+)
G228384 NA non-coding downstream 104549 17137271 ~ 17138351 (+)
G228392 NA non-coding downstream 155204 17187926 ~ 17205640 (+)
G228335 ahcyl2,LOC103371314,LOC107725924,LOC107656398 other upstream 99069 16919663 ~ 16922823 (+)
morn2 morn2 other upstream 104964 16880276 ~ 16916928 (+)
stmp1 NA other upstream 154096 16866310 ~ 16867796 (+)
cald1a LOC102212027,LOC102781594,LOC102298269,LOC103382882,LOC106941466,LOC103156466,LOC101472471,LOC106916645,LOC106525550,LOC107395349,LOC103356441 other upstream 190649 16771058 ~ 16831243 (+)
tmem168a LOC103368481 other upstream 741831 16267136 ~ 16280061 (+)
srr srr,LOC105936311,LOC103459528 other downstream 1497414 18530136 ~ 18533114 (+)
LOC120553630 muc19 other downstream 1790110 18822832 ~ 18855314 (+)
LOC120553164 NA other downstream 2320261 19352983 ~ 19355551 (+)
G228784 LOC103359233,LOC104943309,LOC100709697 other downstream 2377768 19410490 ~ 19413704 (+)
LOC120553210 LOC104943308 other downstream 2599215 19631937 ~ 19839382 (+)

Expression


Co-expression Network