zmp:0000000711 (tulp3)


Basic Information

Item Value
gene id zmp:0000000711
gene name tulp3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 10117159 ~ 10138235 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791568.1
AATAGCAGAGATCTTGGAACCTGCAGGGTGTACTGTAAGGCAGGACTGCACAATAACTCTGAGCTTCAGTgtgaatatacatttttgtgaaaCTGTAGATAGCAGAGCCCTGGACTAGCATTTTTGCAGCCGCATCCATGGACACTATAAAGAATGGGGGATCTCAGCCTGTCTACAGTCGCTGGTCATACAGACCTTCGAGCTCTGCCAGCTTCTCCTCTAACTCAACAGCAAGTGGCATCGAAGATGACAGTGCCAGTCTTATGCAACAGAAGCTGGAAAAACAGAGGGCACTACTGGAGCAGAAGCAGCGGAGGAAGCGCCAGGAGCCTCTGATGGTCCAGCCCAACACCGAGACTCGGCCCCGGCGCTCCAGGACGCGGCGTGGTGAGGAGCAGGCCCCTCTGGTAGAGTCTCTAGTAACTATCACCAACGATGTCATCATGGATGGTATCGATGGCCCAGCAGCTTTTTTGGGCTCAGAAGCCCCTCATCTGGGGATGAAAATCCTGTCCGTGAGCCAGTCTCAGCCCCAGTCTCAGTTCCAGTCACAGCCTCTGTCTCAGCACCAGTCCCCTATCGCTGAGGAGCctgagagagatggagacacTGAGACGCTGCTAGAGCCCAAGACAGATATCCATGAACTACTGCAGAAACAAGGTCTGTCTGGCAGTATGAACTTCGATGAAGCCAGCGAGCATGAGGACGATGTGGAGGAAGAACGGACACGTTCTCTGTCTCCTAACGCAGACaccaccagaccttcctctgccgCCAGTGGCAAGGACATTCCAGAGGTGGCACCCCCCGGATCACCCACAGCAGAGGGCTCACTAATTGATGTGGCCAATCTAGAGGAGTTTGTTTTGCGTCCGGCTCCACGTGGCGTCACTGTTAAATGTCGAATCACCCGGGACAAGAAGGGCATGGACCGCGGCCTCTACCCCACCTACTTCATGCACATGGAGAGAGAGGATGGCAAGCGAGTGTTTTTGCTGgcaggaagaaagagaaagaagagtaaGACCTCCAACTACCTTATTTCAGTGGATGCCACTGATCTGTCgcgagagggagagagcttCATAGGTAAACTGAGGTCCAACCTCATGGGCACCAAATTCACAGTGTATGACAACGGCACCAATCCCTGCAAAAACCCCGGGACACTGCTGGAAGAGAGCAACACACGACAGGAAGTGGCTGCCATCTGCTACGAGACCAACGTGCTGGGATTCAAAGGACCACGTAAGATGACTGTAATCATCCCGGGCATGAACATGAACTTTGAAAGAGTCCCTGTAAGGCCTCAAAATGAGCAGGAGAGCCTCCTGAGCAGGTGGCAGAATCACTCACTGGACAACCTGATTGAGTTGCACAATAAGGCCCCCGTTTGGAACGATGACACCCAGTCCTATGTGCTAAACTTCCATGGCCGCGTTACTCAGGCTTCAGTCAAAAACTTTCAAATAGTTCACGATAACGACCCTGACTACATCGTCATGCAGTTTGGCAGAGTGGCTGAAGACATCTTCACTCTGGACTACAACTACCCCATGTGTGCTCTGCAGGCTTTTGCCATTGGCCTGTCGAGCTTTGACAGCAAGTTGGCCTGTGAATGAACCAACAGTTTTACCACACCACCACCTTTTCTGTCCTCCCTCAAATCTCGTTTTTACAGGATTGTTTGGAAACGGACAGCTACGCTGCTTACATCACCAGGAACCACTTCATGCAGAAGTCAAATACGAAACTGAAAAAGAGAGCAGGAGGGCACTGATGGCATATGTTGGTGCTCTGTTGACCGATCCAACAACCCTCCTGGTTCCTGTgcgcaagtttttttttttttttttttgtaacgttAGCAGGATTATTTCAATATTGGTTTAACCATTTTGTACAGTGTATATGTACAaatgtattcaaactaaaagGGAAAAGGCAAAGCAAATCACACTACTCTCATCTGTGCTGGAGACGGGTGCAAAAAGAACTGATGTTAAATAAATGACTCATTGTTTGAAGGACGGTGACATGTTTATTGATGTTTTGTCTGTTGCTTTTGTTGCCTTTAAATTTGATTTCACTCAGTGTTTTTTGGCTCTTAGGATGGCAATGTTGGCTGAGGCGTTACTCTACAGAGCATAAACCTTTTGAATTACATAACAACATGGCCTTTCCTTTGGCGCCACCCTCAGGCCAAAATGTGGAATTATTTAGCaaagttttctgtttttcatcTGTCTTTTCTGGCAAGTAAGTCAGAATTTTAATCTTGTTTACATCTTCTAGTGTGGCTACATGGTTTAGTCTGCCATCTACTTACAACTAATTTTGACGTTCTTTTATTATCATTGTTAACCCTCATTTTATTCTTGTGTGGAAAGTGCATTATTCAGAACAGGCCTGTCTTAtcgtttttatgtttttttgtgaataAGTGTAATTTTTATCTTGTGACTGTGATTTTTCTTTGTCATAACAAGTTGGattattgtgaaaaaaaaatgcagaattGCACATTTAAAGAGAAAGGATAAACATattgtatataaaatataaagtaaTGCCTTCTTGATTGATCTATTCTGGCAGTCTTTATCTAACATGAAATACCAAATTTAATTTCAAGACACGGAATTTTCTTTGTTGCACAGATACATAAGTGACATCAGACTTTGTATGAAGAGAAACAAGAAATCTACTGTATCTACGCTGAGTATTCAGAATATCACTGACATTTTATTGAGGTGAAATAGAGTTGGAGGCAATTTTGTACAGCCCACATTTGTTCTGCCTCAAATCCTCAACATAAATGCCAATGTCTCTTCATCTCCATTTGAATTATGGGAAGCTTAAGAAATCAATAAAGGATAGTTTCCTTTATGTCATCA
>XM_039791569.1
TGTGCTCGGTAACTAAGGACCGAGTGTAACAGAGTTCTTTTCAACCGCGTCCACAAAAAGTACTGCTGCACGAGGATCTTCCTTAGCAACCGTGGATAAACATGAGTTACTACAGCataagACCTTCGAGCTCTGCCAGCTTCTCCTCTAACTCAACAGCAAGTGGCATCGAAGATGACAGTGCCAGTCTTATGCAACAGAAGCTGGAAAAACAGAGGGCACTACTGGAGCAGAAGCAGCGGAGGAAGCGCCAGGAGCCTCTGATGGTCCAGCCCAACACCGAGACTCGGCCCCGGCGCTCCAGGACGCGGCGTGGTGAGGAGCAGGCCCCTCTGGTAGAGTCTCTAGTAACTATCACCAACGATGTCATCATGGATGGTATCGATGGCCCAGCAGCTTTTTTGGGCTCAGAAGCCCCTCATCTGGGGATGAAAATCCTGTCCGTGAGCCAGTCTCAGCCCCAGTCTCAGTTCCAGTCACAGCCTCTGTCTCAGCACCAGTCCCCTATCGCTGAGGAGCctgagagagatggagacacTGAGACGCTGCTAGAGCCCAAGACAGATATCCATGAACTACTGCAGAAACAAGGTCTGTCTGGCAGTATGAACTTCGATGAAGCCAGCGAGCATGAGGACGATGTGGAGGAAGAACGGACACGTTCTCTGTCTCCTAACGCAGACaccaccagaccttcctctgccgCCAGTGGCAAGGACATTCCAGAGGTGGCACCCCCCGGATCACCCACAGCAGAGGGCTCACTAATTGATGTGGCCAATCTAGAGGAGTTTGTTTTGCGTCCGGCTCCACGTGGCGTCACTGTTAAATGTCGAATCACCCGGGACAAGAAGGGCATGGACCGCGGCCTCTACCCCACCTACTTCATGCACATGGAGAGAGAGGATGGCAAGCGAGTGTTTTTGCTGgcaggaagaaagagaaagaagagtaaGACCTCCAACTACCTTATTTCAGTGGATGCCACTGATCTGTCgcgagagggagagagcttCATAGGTAAACTGAGGTCCAACCTCATGGGCACCAAATTCACAGTGTATGACAACGGCACCAATCCCTGCAAAAACCCCGGGACACTGCTGGAAGAGAGCAACACACGACAGGAAGTGGCTGCCATCTGCTACGAGACCAACGTGCTGGGATTCAAAGGACCACGTAAGATGACTGTAATCATCCCGGGCATGAACATGAACTTTGAAAGAGTCCCTGTAAGGCCTCAAAATGAGCAGGAGAGCCTCCTGAGCAGGTGGCAGAATCACTCACTGGACAACCTGATTGAGTTGCACAATAAGGCCCCCGTTTGGAACGATGACACCCAGTCCTATGTGCTAAACTTCCATGGCCGCGTTACTCAGGCTTCAGTCAAAAACTTTCAAATAGTTCACGATAACGACCCTGACTACATCGTCATGCAGTTTGGCAGAGTGGCTGAAGACATCTTCACTCTGGACTACAACTACCCCATGTGTGCTCTGCAGGCTTTTGCCATTGGCCTGTCGAGCTTTGACAGCAAGTTGGCCTGTGAATGAACCAACAGTTTTACCACACCACCACCTTTTCTGTCCTCCCTCAAATCTCGTTTTTACAGGATTGTTTGGAAACGGACAGCTACGCTGCTTACATCACCAGGAACCACTTCATGCAGAAGTCAAATACGAAACTGAAAAAGAGAGCAGGAGGGCACTGATGGCATATGTTGGTGCTCTGTTGACCGATCCAACAACCCTCCTGGTTCCTGTgcgcaagtttttttttttttttttttgtaacgttAGCAGGATTATTTCAATATTGGTTTAACCATTTTGTACAGTGTATATGTACAaatgtattcaaactaaaagGGAAAAGGCAAAGCAAATCACACTACTCTCATCTGTGCTGGAGACGGGTGCAAAAAGAACTGATGTTAAATAAATGACTCATTGTTTGAAGGACGGTGACATGTTTATTGATGTTTTGTCTGTTGCTTTTGTTGCCTTTAAATTTGATTTCACTCAGTGTTTTTTGGCTCTTAGGATGGCAATGTTGGCTGAGGCGTTACTCTACAGAGCATAAACCTTTTGAATTACATAACAACATGGCCTTTCCTTTGGCGCCACCCTCAGGCCAAAATGTGGAATTATTTAGCaaagttttctgtttttcatcTGTCTTTTCTGGCAAGTAAGTCAGAATTTTAATCTTGTTTACATCTTCTAGTGTGGCTACATGGTTTAGTCTGCCATCTACTTACAACTAATTTTGACGTTCTTTTATTATCATTGTTAACCCTCATTTTATTCTTGTGTGGAAAGTGCATTATTCAGAACAGGCCTGTCTTAtcgtttttatgtttttttgtgaataAGTGTAATTTTTATCTTGTGACTGTGATTTTTCTTTGTCATAACAAGTTGGattattgtgaaaaaaaaatgcagaattGCACATTTAAAGAGAAAGGATAAACATattgtatataaaatataaagtaaTGCCTTCTTGATTGATCTATTCTGGCAGTCTTTATCTAACATGAAATACCAAATTTAATTTCAAGACACGGAATTTTCTTTGTTGCACAGATACATAAGTGACATCAGACTTTGTATGAAGAGAAACAAGAAATCTACTGTATCTACGCTGAGTATTCAGAATATCACTGACATTTTATTGAGGTGAAATAGAGTTGGAGGCAATTTTGTACAGCCCACATTTGTTCTGCCTCAAATCCTCAACATAAATGCCAATGTCTCTTCATCTCCATTTGAATTATGGGAAGCTTAAGAAATCAATAAAGGATAGTTTCCTTTATGTCATCA
>XM_039791571.1
atcccggaagtggaacgttgtagGTATATACTATTCACAATCTGATGGAAAACaataactgtgaaatataaagtttacttgtgctacattggggggttaaagaacacaacagggcGTCACATAAATGGGCCGTTTAGTGACACTCCCACACCGCTGCAAAACCTTGCGGCGAACGCCGGCCCGACCGAATGAAGCCGAATGAAGCCGAATGAAGCCGAATGAAGCTGAATGAAGCTGAATGAAGCTGAATGAAGCCTTATGCTGCACACTTTCAGCTGAGTCCAAACAGCCTCACTTGAGTCTTCTGTTCTTACGTAAATCATGAGGACAAACACATCCTCCTATGCCCAGAGGGGGATCACATGCAGGTTATGGAAAATCTATTGataaatattaaacaataaaagTTAAGTCCATCTTTTTACTGTTTTGACTCAATTCAGTGTTTCTCACCCCATTTCAAATAGTAAAATGAAAACCATTCAGGCAATAATACCAGGAGCACTGTGACCATATCTCACTTTGAGcactcccccctctctctctctctctctctctctctctctctctctctccctctccctccctctctccctccctcccactgGAGCACTAATGACGACTGATTCAGAGTTAGCAACGGTGACCGTGCGTACACTCAGAGAGCCAGACctttttcaggaacacatagtgCAGAGCAGTTGGTTTGTCCGTCGCAGAGGGATGAGGGACAGGGGGACAGAGTCATTCCCACCTGGAGTGCTGCTCTTTGGGGGAGAACGTACTTCCACCCTACCTCAAGACAAATGCGAATTGTAATGTTTTTTCTATAAAGAAACCTGTCAACTTTGGCTCACACTTCAGGACTCAATGGAACGGAGGGCACTACTGGAGCAGAAGCAGCGGAGGAAGCGCCAGGAGCCTCTGATGGTCCAGCCCAACACCGAGACTCGGCCCCGGCGCTCCAGGACGCGGCGTGGTGAGGAGCAGGCCCCTCTGGTAGAGTCTCTAGTAACTATCACCAACGATGTCATCATGGATGGTATCGATGGCCCAGCAGCTTTTTTGGGCTCAGAAGCCCCTCATCTGGGGATGAAAATCCTGTCCGTGAGCCAGTCTCAGCCCCAGTCTCAGTTCCAGTCACAGCCTCTGTCTCAGCACCAGTCCCCTATCGCTGAGGAGCctgagagagatggagacacTGAGACGCTGCTAGAGCCCAAGACAGATATCCATGAACTACTGCAGAAACAAGGTCTGTCTGGCAGTATGAACTTCGATGAAGCCAGCGAGCATGAGGACGATGTGGAGGAAGAACGGACACGTTCTCTGTCTCCTAACGCAGACaccaccagaccttcctctgccgCCAGTGGCAAGGACATTCCAGAGGTGGCACCCCCCGGATCACCCACAGCAGAGGGCTCACTAATTGATGTGGCCAATCTAGAGGAGTTTGTTTTGCGTCCGGCTCCACGTGGCGTCACTGTTAAATGTCGAATCACCCGGGACAAGAAGGGCATGGACCGCGGCCTCTACCCCACCTACTTCATGCACATGGAGAGAGAGGATGGCAAGCGAGTGTTTTTGCTGgcaggaagaaagagaaagaagagtaaGACCTCCAACTACCTTATTTCAGTGGATGCCACTGATCTGTCgcgagagggagagagcttCATAGGTAAACTGAGGTCCAACCTCATGGGCACCAAATTCACAGTGTATGACAACGGCACCAATCCCTGCAAAAACCCCGGGACACTGCTGGAAGAGAGCAACACACGACAGGAAGTGGCTGCCATCTGCTACGAGACCAACGTGCTGGGATTCAAAGGACCACGTAAGATGACTGTAATCATCCCGGGCATGAACATGAACTTTGAAAGAGTCCCTGTAAGGCCTCAAAATGAGCAGGAGAGCCTCCTGAGCAGGTGGCAGAATCACTCACTGGACAACCTGATTGAGTTGCACAATAAGGCCCCCGTTTGGAACGATGACACCCAGTCCTATGTGCTAAACTTCCATGGCCGCGTTACTCAGGCTTCAGTCAAAAACTTTCAAATAGTTCACGATAACGACCCTGACTACATCGTCATGCAGTTTGGCAGAGTGGCTGAAGACATCTTCACTCTGGACTACAACTACCCCATGTGTGCTCTGCAGGCTTTTGCCATTGGCCTGTCGAGCTTTGACAGCAAGTTGGCCTGTGAATGAACCAACAGTTTTACCACACCACCACCTTTTCTGTCCTCCCTCAAATCTCGTTTTTACAGGATTGTTTGGAAACGGACAGCTACGCTGCTTACATCACCAGGAACCACTTCATGCAGAAGTCAAATACGAAACTGAAAAAGAGAGCAGGAGGGCACTGATGGCATATGTTGGTGCTCTGTTGACCGATCCAACAACCCTCCTGGTTCCTGTgcgcaagtttttttttttttttttttgtaacgttAGCAGGATTATTTCAATATTGGTTTAACCATTTTGTACAGTGTATATGTACAaatgtattcaaactaaaagGGAAAAGGCAAAGCAAATCACACTACTCTCATCTGTGCTGGAGACGGGTGCAAAAAGAACTGATGTTAAATAAATGACTCATTGTTTGAAGGACGGTGACATGTTTATTGATGTTTTGTCTGTTGCTTTTGTTGCCTTTAAATTTGATTTCACTCAGTGTTTTTTGGCTCTTAGGATGGCAATGTTGGCTGAGGCGTTACTCTACAGAGCATAAACCTTTTGAATTACATAACAACATGGCCTTTCCTTTGGCGCCACCCTCAGGCCAAAATGTGGAATTATTTAGCaaagttttctgtttttcatcTGTCTTTTCTGGCAAGTAAGTCAGAATTTTAATCTTGTTTACATCTTCTAGTGTGGCTACATGGTTTAGTCTGCCATCTACTTACAACTAATTTTGACGTTCTTTTATTATCATTGTTAACCCTCATTTTATTCTTGTGTGGAAAGTGCATTATTCAGAACAGGCCTGTCTTAtcgtttttatgtttttttgtgaataAGTGTAATTTTTATCTTGTGACTGTGATTTTTCTTTGTCATAACAAGTTGGattattgtgaaaaaaaaatgcagaattGCACATTTAAAGAGAAAGGATAAACATattgtatataaaatataaagtaaTGCCTTCTTGATTGATCTATTCTGGCAGTCTTTATCTAACATGAAATACCAAATTTAATTTCAAGACACGGAATTTTCTTTGTTGCACAGATACATAAGTGACATCAGACTTTGTATGAAGAGAAACAAGAAATCTACTGTATCTACGCTGAGTATTCAGAATATCACTGACATTTTATTGAGGTGAAATAGAGTTGGAGGCAATTTTGTACAGCCCACATTTGTTCTGCCTCAAATCCTCAACATAAATGCCAATGTCTCTTCATCTCCATTTGAATTATGGGAAGCTTAAGAAATCAATAAAGGATAGTTTCCTTTATGTCATCA

Function

symbol description
tulp3 Enables several functions, including enzyme binding activity; intraciliary transport particle A binding activity; and phosphatidylinositol binding activity. Involved in negative regulation of smoothened signaling pathway. Acts upstream of or within protein localization to cilium and regulation of G protein-coupled receptor signaling pathway. Located in several cellular components, including 9+0 non-motile cilium; ciliary base; and nuclear lumen.

NR:

description
PREDICTED: tubby-related protein 3 isoform X3

GO: NA

KEGG:

id description
K19600 TUB, TULP; tubby and related proteins

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791568.1 False 2900 mRNA 0.45 12 10117159 10134226
XM_039791569.1 False 2828 mRNA 0.45 12 10117159 10138235
XM_039791571.1 True 3492 mRNA 0.45 10 10117159 10127182

Neighbor

gene id symbol gene type direction distance location
ptn ptn,LOC106927343 coding downstream 44378 10030163 ~ 10072781 (-)
mtpn mtpn coding downstream 290616 9796453 ~ 9826543 (-)
LOC120553797 LOC104925308,LOC103361818,LOC104949407 coding downstream 346833 9753743 ~ 9770326 (-)
sema3c sema3c coding downstream 394703 9681207 ~ 9722456 (-)
gnai1 gnai1,LOC107590838,LOC103382723,LOC100706147 coding downstream 447624 9648490 ~ 9669535 (-)
rhno1 NA coding upstream 707 10138942 ~ 10140706 (-)
si:ch73-352p4.8 LOC105937590,LOC104962836,LOC107085821,LOC102237094,LOC103140239,LOC107386545,LOC103459124 coding upstream 9404 10147639 ~ 10153154 (-)
bik NA coding upstream 45050 10183285 ~ 10186973 (-)
trnay-gua_60 NA coding upstream 57549 10195784 ~ 10195870 (-)
trnay-gua_61 NA coding upstream 58112 10196347 ~ 10196433 (-)
G226917 NA non-coding downstream 374599 9742004 ~ 9742560 (-)
G226803 LOC103358093,LOC102788764 non-coding downstream 997188 9116810 ~ 9119971 (-)
G226800 NA non-coding downstream 1077302 9037771 ~ 9039857 (-)
G226797 NA non-coding downstream 1087789 9029046 ~ 9029370 (-)
G226787 NA non-coding downstream 1147261 8969389 ~ 8969898 (-)
G227019 NA non-coding upstream 79851 10218086 ~ 10220450 (-)
G227020 NA non-coding upstream 82721 10220956 ~ 10284085 (-)
G227021 pacsin2,LOC102778832 non-coding upstream 85259 10223494 ~ 10225897 (-)
LOC120553506 NA non-coding upstream 371496 10509731 ~ 10537837 (-)
G227089 NA non-coding upstream 399969 10538204 ~ 10538416 (-)
dram1 dram1 other downstream 1302719 8809393 ~ 8814440 (-)
ppfia2 ppfia2 other downstream 1323249 8565242 ~ 8793910 (-)
G226495 LOC103356655,LOC105934024 other downstream 2225848 7888571 ~ 7891311 (-)
LOC120553151 LOC107386793,LOC104950937 other downstream 2622852 7422165 ~ 7494307 (-)
usp44 usp44,LOC102783730 other downstream 2838835 7269037 ~ 7278324 (-)
G227082 anks1b other upstream 375259 10513494 ~ 10522962 (-)
G227197 LOC102293685,LOC104918784,LOC102194436 other upstream 841963 10980198 ~ 10981259 (-)
hgfa LOC103365344,LOC104958230 other upstream 1320346 11458581 ~ 11482578 (-)
pcloa pclo,LOC107085986,LOC103358500,LOC102794373,LOC108235068,LOC106514760 other upstream 1479120 11617355 ~ 11676832 (-)
cracr2ab LOC102301749,LOC103365394 other upstream 1699013 11837248 ~ 11848941 (-)

Expression


Co-expression Network