si:ch73-352p4.8 (LOC105937590,LOC104962836,LOC107085821,LOC102237094,LOC103140239,LOC107386545,LOC103459124)


Basic Information

Item Value
gene id si:ch73-352p4.8
gene name LOC105937590,LOC104962836,LOC107085821,LOC102237094,LOC103140239,LOC107386545,LOC103459124
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 10147639 ~ 10153154 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791577.1
AGCCCGAAATCCATCAAGCTGTACACACATAagagcacatgcacacataccaaCAGTACAATGAAGGAATGTCTTTAAACGTGGTTACTACTTGCTGAGGCTGGGAAGAGTGCTGGCTTTGTTCCCTGCTCAGACTGGGCGGATGGGGTAAGAGCCAATAAGGGGAGAAAGCCATGCAGCACAAGTTAGGGGGAGAGGGGGCCAAGTGAGGCCACTGTTGGCCTCTTCCTACCACAGCTTCATGCACATTCACTAAAGTGCTGCAAATGTGTGTCCAGAAGGATTAACAGGAAGCACAAAGAGGACTGTTGAATGCTATTTTGGGGAAAGCATCAGGGGAAAAGTGGAAAGGATTcggagacagaaaaaaaaggtaagaaCTTAAGTTTGCAGGACTCACATATACAATAAAAGGTGCAAACTTTTAATGAGCAGTTTGAAGAAAACTAAGTGTGGTCAGTTTGAGGTGTCAAATTGGGATCTACGGCCATCTGTGAAATGGACGGGACGCAAATAATGAAAGAGGATGACAAGAAGGAGAAGACAGAAGAGGAGGTGGTGCACCTTCGGAGAGAGATCGGCTTGCTGCCGGCTGCATGCTTCATCATCGGTACAGTGGTGGGCAGTGGGATCTTCATCGCACCCAAGGGAGTCCTGATAAACAGTGGCAGCGTGGGGCTCTCTCTGCTGGTGTGGGCGCTGTGTGGGGTGCTCTCCTTATTTGGGGCCCTGTGCTATGCTGAACTGGGCACCAGTTTTACAAAATCAGGGGGCCACTACACTTACCTATTGGAGACGCTGGGGCCACTGCCGGCCTTTTTACGACTCTGGGTTGAGTTCTTATTCATCAGGCCAGCTGTGGCCTCCTATGTGTCCCTGGCTTTTGGCCGCTATGTGGTGGAGCCATTCTTTGCTCCCTGTGCTGCTCCCACAGTGCTAATCAAACTTGTCAGCATCCTGGGATTGACATTTGTTGTGGCAGTCAACTGCTGGAGTGTGACTTGGGCCTCTCGCACTCAGATCACCTTGACATTTGTTAAGATGTTTGCTCTGGTCCTTATCATCGTCCCTGGTGTCATCGCACTGGCCAAAGGAAAAACTGAGAATTTCCAGAATGGTTTTGAGGTTGACTCATTAACATTGGATAGATTGCCACTGGCTTTTTATAATGGCCTATATGCCTATGGTGGATGGTTTTATCTGAACTTTGTCACTGAAGAGGTCATAAACCCAAATAGAAACATCCCACTGGCAATAATCTGCTCCATGGTGACAGTGACAGTCTGTTACGTGCTTGTTAACGTGGCTTACTACACTATGATGACTCCCGCTGAGCTCCTGCTGTCTGATGCTGTGGCTGTGACGTTTGCGAACCGTGCTTTCGAGGGTTTGGCTTCTGTGATTCCCTTTCTTGTAGCCCTATCCTGTCTTGGAGCACTTAACGGAGGCTTCTTTGGGTCACCCAGGATGCTGTTTGTGGGAGCCAGGGAGGGCCACTGGCCTCCAATCTTTTCCATGATTCACATCCGCAGACACACACCTTTGCCTGCTGTGCTGTTACTGTACCCCTTGGTGGTGGTGATGTTAATCACTGGAGAGATCTACCAGCTCATCAATTTTGCCTCCTTTGCTCGCTGGTTCTTCATCGCCTTGGCAACTTTGGGGATGCTCATACATCGATATCGCTTCCCTCTCCACCCGAGACCTTTCAAGGTGCCCCTGGTCATCGCAGTCACCTTCACGGTGGTTTGCTTCTTCATCGTGGGTCTGTCTCTTTACTCGGACCCCTGGAACACAGGGCGAAGCTGTGCTCTCACACTGACCGGGGTCCCAGTTTATTATGTGACTGTCTACCGCTTTCGCTTGCCCCATAGATGGAGACGCATCTTCAACTACTGCAGCATGCATCTGCAGATCCTTTTAGAAGTGACTCAACAAGAAGTGCAGACATACTGAAGACCCCAAAGACCGATTTCTACTGAGACTTCGTGGATAACACCTTAACAAGTCCTAGagtattttttgtttaaacCTGTGTTTTATATTGGTCcattttaatacaaaaaaaaatgtaagatgcTGTTTTGAGAAACTATTACAATTATGCTGGAAATAGGTGGGGTATCGGACTTATCTTAGACTGCATTTAAGGCACTTAGCTCACAACTTTGCCATTGGAACAAGAAATGCTTTCGTCTATCATTGTCATTCTTCATGAACATCTAAAGCTCTGCTCAAGagtcttttttatgttttacaaaGTTCTTTGAGACTAATAAAGTCATTCTTGAATCACAATCTATAAATGGTTTAAACTATAGTTGCATAATATATcattttttatcgtcatcgcatacatcaactggcgcaatatacaCATTGCAAGAGACTAACATCACAATAGACACtcagattttttgtgttagttgaaagaaaaaaaatcagcagaAAACTATGGCAAGCCGTTTCGACAAAATCTAAACATTTCTAATCTCAATTCAAATTACTGAACTCAATAATTCAATTAttgagatacattttttttttgattttatgtTAAAATGGCTTGCCATAGTAATCTGCACATTAAAATGTATgccattctttttttaagtggtgctttttatattcaattcaatgttcactttgttcaataaaagaatgttggaaatga
>XM_039791578.1
AGCCCGAAATCCATCAAGCTGTACACACATAagagcacatgcacacataccaaCAGTACAATGAAGGAATGTCTTTAAACGTGGTTACTACTTGCTGAGGCTGGGAAGAGTGCTGGCTTTGTTCCCTGCTCAGACTGGGCGGATGGGGTAAGAGCCAATAAGGGGAGAAAGCCATGCAGCACAAGTTAGGGGGAGAGGGGGCCAAGTGAGGCCACTGTTGGCCTCTTCCTACCACAGCTTCATGCACATTCACTAAAGTGCTGCAAATGTGTGTCCAGAAGGATTAACAGGAAGCACAAAGAGGACTGTTGAATGCTATTTTGGGGAAAGCATCAGGGGAAAAGTGGAAAGGATTcggagacagaaaaaaaagTTTGAGGTGTCAAATTGGGATCTACGGCCATCTGTGAAATGGACGGGACGCAAATAATGAAAGAGGATGACAAGAAGGAGAAGACAGAAGAGGAGGTGGTGCACCTTCGGAGAGAGATCGGCTTGCTGCCGGCTGCATGCTTCATCATCGGTACAGTGGTGGGCAGTGGGATCTTCATCGCACCCAAGGGAGTCCTGATAAACAGTGGCAGCGTGGGGCTCTCTCTGCTGGTGTGGGCGCTGTGTGGGGTGCTCTCCTTATTTGGGGCCCTGTGCTATGCTGAACTGGGCACCAGTTTTACAAAATCAGGGGGCCACTACACTTACCTATTGGAGACGCTGGGGCCACTGCCGGCCTTTTTACGACTCTGGGTTGAGTTCTTATTCATCAGGCCAGCTGTGGCCTCCTATGTGTCCCTGGCTTTTGGCCGCTATGTGGTGGAGCCATTCTTTGCTCCCTGTGCTGCTCCCACAGTGCTAATCAAACTTGTCAGCATCCTGGGATTGACATTTGTTGTGGCAGTCAACTGCTGGAGTGTGACTTGGGCCTCTCGCACTCAGATCACCTTGACATTTGTTAAGATGTTTGCTCTGGTCCTTATCATCGTCCCTGGTGTCATCGCACTGGCCAAAGGAAAAACTGAGAATTTCCAGAATGGTTTTGAGGTTGACTCATTAACATTGGATAGATTGCCACTGGCTTTTTATAATGGCCTATATGCCTATGGTGGATGGTTTTATCTGAACTTTGTCACTGAAGAGGTCATAAACCCAAATAGAAACATCCCACTGGCAATAATCTGCTCCATGGTGACAGTGACAGTCTGTTACGTGCTTGTTAACGTGGCTTACTACACTATGATGACTCCCGCTGAGCTCCTGCTGTCTGATGCTGTGGCTGTGACGTTTGCGAACCGTGCTTTCGAGGGTTTGGCTTCTGTGATTCCCTTTCTTGTAGCCCTATCCTGTCTTGGAGCACTTAACGGAGGCTTCTTTGGGTCACCCAGGATGCTGTTTGTGGGAGCCAGGGAGGGCCACTGGCCTCCAATCTTTTCCATGATTCACATCCGCAGACACACACCTTTGCCTGCTGTGCTGTTACTGTACCCCTTGGTGGTGGTGATGTTAATCACTGGAGAGATCTACCAGCTCATCAATTTTGCCTCCTTTGCTCGCTGGTTCTTCATCGCCTTGGCAACTTTGGGGATGCTCATACATCGATATCGCTTCCCTCTCCACCCGAGACCTTTCAAGGTGCCCCTGGTCATCGCAGTCACCTTCACGGTGGTTTGCTTCTTCATCGTGGGTCTGTCTCTTTACTCGGACCCCTGGAACACAGGGCGAAGCTGTGCTCTCACACTGACCGGGGTCCCAGTTTATTATGTGACTGTCTACCGCTTTCGCTTGCCCCATAGATGGAGACGCATCTTCAACTACTGCAGCATGCATCTGCAGATCCTTTTAGAAGTGACTCAACAAGAAGTGCAGACATACTGAAGACCCCAAAGACCGATTTCTACTGAGACTTCGTGGATAACACCTTAACAAGTCCTAGagtattttttgtttaaacCTGTGTTTTATATTGGTCcattttaatacaaaaaaaaatgtaagatgcTGTTTTGAGAAACTATTACAATTATGCTGGAAATAGGTGGGGTATCGGACTTATCTTAGACTGCATTTAAGGCACTTAGCTCACAACTTTGCCATTGGAACAAGAAATGCTTTCGTCTATCATTGTCATTCTTCATGAACATCTAAAGCTCTGCTCAAGagtcttttttatgttttacaaaGTTCTTTGAGACTAATAAAGTCATTCTTGAATCACAATCTATAAATGGTTTAAACTATAGTTGCATAATATATcattttttatcgtcatcgcatacatcaactggcgcaatatacaCATTGCAAGAGACTAACATCACAATAGACACtcagattttttgtgttagttgaaagaaaaaaaatcagcagaAAACTATGGCAAGCCGTTTCGACAAAATCTAAACATTTCTAATCTCAATTCAAATTACTGAACTCAATAATTCAATTAttgagatacattttttttttgattttatgtTAAAATGGCTTGCCATAGTAATCTGCACATTAAAATGTATgccattctttttttaagtggtgctttttatattcaattcaatgttcactttgttcaataaaagaatgttggaaatga
>XM_039791579.1
CCGAAATCCATCAAGCTGTACACACATAagagcacatgcacacataccaaCAGTACAATGAAGGAATGTCTTTAAACGTGGTTACTACTTGCTGAGGCTGGGAAGAGTGCTGGCTTTGTTCCCTGCTCAGACTGGGCGGATGGGGTAAGAGCCAATAAGGGGAGAAAGCCATGCAGCACAAGTTAGGGGGAGAGGGGGCCAAGTGAGGCCACTGTTGGCCTCTTCCTACCACAGCTTCATGCACATTCACTAAAGTGCTGCAAATGTGTGTCCAGAAGGATTAACAGGAAGCACAAAGAGGACTGTTGAATGCTATTTTGGGGAAAGCATCAGGGGAAAAGTGGAAAGGATTcggagacagaaaaaaaaggtaagaaCTTAAGTTTGCAGGACTCACATATACAATAAAAGGTGCAAACTTTTAATGAGCAGTTTGAAGAAAACTAAGTGTGGTCAGTTTGAGGTGTCAAATTGGGATCTACGGCCATCTGTGAAATGGACGGGACGCAAATAATGAAAGAGGATGACAAGAAGGAGAAGACAGAAGAGGAGGTGGTGCACCTTCGGAGAGAGATCGGCTTGCTGCCGGCTGCATGCTTCATCATCGGTACAGTGGTGGGCAGTGGGATCTTCATCGCACCCAAGGGAGTCCTGATAAACAGTGGCAGCGTGGGGCTCTCTCTGCTGGTGTGGGCGCTGTGTGGGGTGCTCTCCTTATTTGGCCAGCTGTGGCCTCCTATGTGTCCCTGGCTTTTGGCCGCTATGTGGTGGAGCCATTCTTTGCTCCCTGTGCTGCTCCCACAGTGCTAATCAAACTTGTCAGCATCCTGGGATTGACATTTGTTGTGGCAGTCAACTGCTGGAGTGTGACTTGGGCCTCTCGCACTCAGATCACCTTGACATTTGTTAAGATGTTTGCTCTGGTCCTTATCATCGTCCCTGGTGTCATCGCACTGGCCAAAGGAAAAACTGAGAATTTCCAGAATGGTTTTGAGGTTGACTCATTAACATTGGATAGATTGCCACTGGCTTTTTATAATGGCCTATATGCCTATGGTGGATGGTTTTATCTGAACTTTGTCACTGAAGAGGTCATAAACCCAAATAGAAACATCCCACTGGCAATAATCTGCTCCATGGTGACAGTGACAGTCTGTTACGTGCTTGTTAACGTGGCTTACTACACTATGATGACTCCCGCTGAGCTCCTGCTGTCTGATGCTGTGGCTGTGACGTTTGCGAACCGTGCTTTCGAGGGTTTGGCTTCTGTGATTCCCTTTCTTGTAGCCCTATCCTGTCTTGGAGCACTTAACGGAGGCTTCTTTGGGTCACCCAGGATGCTGTTTGTGGGAGCCAGGGAGGGCCACTGGCCTCCAATCTTTTCCATGATTCACATCCGCAGACACACACCTTTGCCTGCTGTGCTGTTACTGTACCCCTTGGTGGTGGTGATGTTAATCACTGGAGAGATCTACCAGCTCATCAATTTTGCCTCCTTTGCTCGCTGGTTCTTCATCGCCTTGGCAACTTTGGGGATGCTCATACATCGATATCGCTTCCCTCTCCACCCGAGACCTTTCAAGGTGCCCCTGGTCATCGCAGTCACCTTCACGGTGGTTTGCTTCTTCATCGTGGGTCTGTCTCTTTACTCGGACCCCTGGAACACAGGGCGAAGCTGTGCTCTCACACTGACCGGGGTCCCAGTTTATTATGTGACTGTCTACCGCTTTCGCTTGCCCCATAGATGGAGACGCATCTTCAACTACTGCAGCATGCATCTGCAGATCCTTTTAGAAGTGACTCAACAAGAAGTGCAGACATACTGAAGACCCCAAAGACCGATTTCTACTGAGACTTCGTGGATAACACCTTAACAAGTCCTAGagtattttttgtttaaacCTGTGTTTTATATTGGTCcattttaatacaaaaaaaaatgtaagatgcTGTTTTGAGAAACTATTACAATTATGCTGGAAATAGGTGGGGTATCGGACTTATCTTAGACTGCATTTAAGGCACTTAGCTCACAACTTTGCCATTGGAACAAGAAATGCTTTCGTCTATCATTGTCATTCTTCATGAACATCTAAAGCTCTGCTCAAGagtcttttttatgttttacaaaGTTCTTTGAGACTAATAAAGTCATTCTTGAATCACAATCTATAAATGGTTTAAACTATAGTTGCATAATATATcattttttatcgtcatcgcatacatcaactggcgcaatatacaCATTGCAAGAGACTAACATCACAATAGACACtcagattttttgtgttagttgaaagaaaaaaaatcagcagaAAACTATGGCAAGCCGTTTCGACAAAATCTAAACATTTCTAATCTCAATTCAAATTACTGAACTCAATAATTCAATTAttgagatacattttttttttgattttatgtTAAAATGGCTTGCCATAGTAATCTGCACATTAAAATGTATgccattctttttttaagtggtgctttttatattcaattcaatgttcactttgttcaataaaagaatgttggaaatga

Function

NR:

description
cystine/glutamate transporter-like isoform X1

GO:

id name namespace
GO:0003333 amino acid transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015171 amino acid transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791577.1 True 2674 mRNA 0.45 12 10147639 10153154
XM_039791578.1 False 2587 mRNA 0.45 13 10147639 10153154
XM_039791579.1 False 2544 mRNA 0.44 11 10147639 10153151

Neighbor

gene id symbol gene type direction distance location
rhno1 NA coding downstream 6933 10138942 ~ 10140706 (-)
zmp:0000000711 tulp3 coding downstream 9404 10117159 ~ 10138235 (-)
ptn ptn,LOC106927343 coding downstream 74858 10030163 ~ 10072781 (-)
mtpn mtpn coding downstream 321096 9796453 ~ 9826543 (-)
LOC120553797 LOC104925308,LOC103361818,LOC104949407 coding downstream 377313 9753743 ~ 9770326 (-)
bik NA coding upstream 30131 10183285 ~ 10186973 (-)
trnay-gua_60 NA coding upstream 42630 10195784 ~ 10195870 (-)
trnay-gua_61 NA coding upstream 43193 10196347 ~ 10196433 (-)
ckap4 NA coding upstream 89518 10242672 ~ 10247265 (-)
LOC120553502 NA coding upstream 110831 10263985 ~ 10264705 (-)
G226917 NA non-coding downstream 405079 9742004 ~ 9742560 (-)
G226803 LOC103358093,LOC102788764 non-coding downstream 1027668 9116810 ~ 9119971 (-)
G226800 NA non-coding downstream 1107782 9037771 ~ 9039857 (-)
G226797 NA non-coding downstream 1118269 9029046 ~ 9029370 (-)
G226787 NA non-coding downstream 1177741 8969389 ~ 8969898 (-)
G227019 NA non-coding upstream 64932 10218086 ~ 10220450 (-)
G227020 NA non-coding upstream 67802 10220956 ~ 10284085 (-)
G227021 pacsin2,LOC102778832 non-coding upstream 70340 10223494 ~ 10225897 (-)
LOC120553506 NA non-coding upstream 356577 10509731 ~ 10537837 (-)
G227089 NA non-coding upstream 385050 10538204 ~ 10538416 (-)
dram1 dram1 other downstream 1333199 8809393 ~ 8814440 (-)
ppfia2 ppfia2 other downstream 1353729 8565242 ~ 8793910 (-)
G226495 LOC103356655,LOC105934024 other downstream 2256328 7888571 ~ 7891311 (-)
LOC120553151 LOC107386793,LOC104950937 other downstream 2653332 7422165 ~ 7494307 (-)
usp44 usp44,LOC102783730 other downstream 2869315 7269037 ~ 7278324 (-)
G227082 anks1b other upstream 360340 10513494 ~ 10522962 (-)
G227197 LOC102293685,LOC104918784,LOC102194436 other upstream 827044 10980198 ~ 10981259 (-)
hgfa LOC103365344,LOC104958230 other upstream 1305427 11458581 ~ 11482578 (-)
pcloa pclo,LOC107085986,LOC103358500,LOC102794373,LOC108235068,LOC106514760 other upstream 1464201 11617355 ~ 11676832 (-)
cracr2ab LOC102301749,LOC103365394 other upstream 1684094 11837248 ~ 11848941 (-)

Expression


Co-expression Network