LOC120553308 (LOC101473685,LOC103362094,LOC102192515,LOC107386672)


Basic Information

Item Value
gene id LOC120553308
gene name LOC101473685,LOC103362094,LOC102192515,LOC107386672
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 8012810 ~ 8023052 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791590.1
aaaacagTGACCGGATGATTATTTGCCCTCGCTAGCTTGACAGCCCCTCGTACTACCGTGACAGTTGCAGTAAACTTATCTGGTGCTGCTCTCTGCGTTGACAAACAACCTTGCAGTTGCCAAAACGGACTGAAAATGCTGTCTTACATCATTGGTTTGATCCGAAGCGGCTTTGACAGCATCGTCAACTTGATCTTCAGACTTCTCTTCTCAAAGAGGAGACCAGCCCTCACCTTAGAGGACCCCAACATCAAGTATGCACTGCGACTGCTGGACAAACAGATTGTCAGCCATGACACAAGGAAGTTCCGATTTGCCCTGCCTTCCCCTGAACACATTCTCGGTCTCCCTATCGGGCAGCATATCTACTTGTCTGCAAAAGTAGATGGGAAACTGGTGGTTCGTCCGTATACCCCAGTGTCCAGTGATGATGACAAAGGCTATGTGGACTTGGTGGTGAAGATTTACTTTAAAGATGTTAATCCTAAATTCCCAGAGGGTGGGAAGATGAGTCAGTACTTGGAGAGCCTGAGGATCAACGACACTATTGACTTCAGAGGACCCAGTGGTCTTCTTGTTTACAAAGGCAAAGGTGTTTTTGCTGTACAACCAGATAAAAAGTCCCCAGCTGACACCAAGACAGCCAAACATGTAGGCATGATCGCTGGAGGAACCGGAATCACTCCGATGTTGCAGCTCATCACAGCTATGATGAAGGATCCACAGGACAAGACAGTGTGTCACCTGCTGTTTGCCAACCAGACTGAGAAAGACATCCTGTTGCGACCAGAGTTGGAGGAGATCCAGGTCAACCACCCGGACCGGTTCAAGCTGTGGTTCACCTTGGACAAAGCACCTGAAGACTGGGAGTACAGCCAAGGCTTCATCAGTGAAGACATGGTGAGGGAACACCTGCCGCCTCCAAGTGAAGACACTCTCATCCTGATGTGTGGTCCTCCGCCTATGATCCAGTTCGCCTGCAACCCCAATCTGGACAAAGTTGGCCACTCCAGCAACCGCAGGTTCACCTTCTAGATGTCTGTCCACACCAAAGAAAGGCGGTTTGGGCGTCCGTTAATTATATTCCCTACCTTGAAAGCATTAAGGCACTCGTACAGTTGCAGTGGGTATTGCACTATGGATGTATACTATATTTATGCCATCATATCCATCATGCAACAGAATCACAGCACGGACCAATTAAAGTAACCAGTCATGGAAGGAATTGGTGaatattttagcttgtttgtgaTTGAAGATGTGAGGATTTTTGTTAGCGTTGGCTTGGAAATGAGGATGTGATTCCAAATCAGTTGGAAACTATTTTTAGTTGAGGTTTATTGTAGGTTTTCTGAGTGCCTTAACACTTGCTTTTCTTTATGCACAGTTTAAGAGTCGCAACCACTTGCTTCATTTATACAGAATATTATTCCATTATTGCTGTTGTCACATTGAAGATGTCAATATTTTGCTAAAACATGTTCAGTGACTTGCTGAATGTGATGTTAACTGATACAATGTCCATGCTGCAAGTTATGCAACATAAAACAATTGCTCTTAAATTTGGCGCTTTGGTTATTCTGTATTATGACAGACTGTCAACCTATAAATCATCCTCATCTACAACTGTTGTAGCACCTACCTGTACGCAACATGCTACTAAAAATAAGACAAATGca

Function

NR:

description
NADH-cytochrome b5 reductase 3

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K00326 E1.6.2.2; cytochrome-b5 reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791590.1 True 1679 mRNA 0.45 9 8012810 8023052

Neighbor

gene id symbol gene type direction distance location
syt10 syt10,LOC103362092 coding downstream 89629 7911000 ~ 7923181 (-)
LOC120553325 LOC102195353 coding downstream 146176 7655004 ~ 7866634 (-)
LOC120553252 LOC104945847,LOC103356654 coding downstream 362907 7642649 ~ 7649903 (-)
igf1 igf1 coding downstream 378872 7616234 ~ 7633938 (-)
nup37 nup37 coding downstream 401562 7578735 ~ 7611248 (-)
syt1a syt1,LOC100695586 coding upstream 1542 8024594 ~ 8249869 (-)
pawr pawr coding upstream 237272 8260324 ~ 8333021 (-)
ppp1r12a ppp1r12a coding upstream 319954 8343006 ~ 8402858 (-)
lin7a lin7a coding upstream 452578 8475630 ~ 8510314 (-)
si:zfos-932h1.3 LOC104950104 coding upstream 772842 8795894 ~ 8802059 (-)
LOC120553157 NA non-coding downstream 456043 7525933 ~ 7556767 (-)
G226417 pah non-coding downstream 500346 7509914 ~ 7512464 (-)
G226384 snrpf,LOC107558408,LOC107738052 non-coding downstream 691615 7319530 ~ 7321195 (-)
LOC120553544 NA non-coding downstream 905611 7105737 ~ 7107199 (-)
LOC120553545 NA non-coding downstream 907108 7102512 ~ 7105702 (-)
G226654 NA non-coding upstream 326065 8349117 ~ 8357438 (-)
G226655 NA non-coding upstream 326650 8349702 ~ 8351174 (-)
G226658 rps16,LOC103382554 non-coding upstream 403685 8426737 ~ 8429906 (-)
G226711 atp6v1e1,LOC103382684,LOC100708725,LOC103358108,LOC108233293,LOC101477634 non-coding upstream 895439 8918491 ~ 8922944 (-)
G226787 NA non-coding upstream 946337 8969389 ~ 8969898 (-)
G226495 LOC103356655,LOC105934024 other downstream 121499 7888571 ~ 7891311 (-)
LOC120553151 LOC107386793,LOC104950937 other downstream 518503 7422165 ~ 7494307 (-)
usp44 usp44,LOC102783730 other downstream 734486 7269037 ~ 7278324 (-)
meig1 meig1 other downstream 923642 7086944 ~ 7089168 (-)
tmem243b tmem243 other downstream 926488 7073893 ~ 7086322 (-)
ppfia2 ppfia2 other upstream 542190 8565242 ~ 8793910 (-)
dram1 dram1 other upstream 786341 8809393 ~ 8814440 (-)
G227082 anks1b other upstream 2490442 10513494 ~ 10522962 (-)
G227197 LOC102293685,LOC104918784,LOC102194436 other upstream 2957146 10980198 ~ 10981259 (-)
hgfa LOC103365344,LOC104958230 other upstream 3435529 11458581 ~ 11482578 (-)

Expression


Co-expression Network