phax


Basic Information

Item Value
gene id phax
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 23529757 ~ 23531807 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791651.1
TGGAAGACGGAAGTGTGGCTTTAGCCTAGCGCGAATTTTCTTCAGAAGGTCTTAAGTTTGTCTTGATAATCAACCTCTTCTTAGCCGTTCACAGTGAGTGGAAGAGCCAAGCAGTGCTAAAATACAATCGACGTTACATGCAGAGCACAGAGTCAGCTGCCGTGTCAGATCTTTAAAGACAAGAAATGGCGCATGGCGGAGATCTAATGGACGGGGATCTGGAAGATGGAGAGCTCTCCGGGTCTAACTCGGAATCTGAGATGGGAACCGCCGCCGCAGCACAAGCTCGACCCCAGGTTCCTACAGCTTTTAGCGGCCAGTCCTTTCACCGCAGAGCCGCTGCCCAGCAGTCTTCCGCCGCCTATCGCAGCACTGGTAGGACGGTGGAGTCCAGCGACAGTGACCTGGACTCGTCGGACGAGGAGGCGGCTGTTTGGCGCAAGAAACGCCAGAAAGTATTCGACGCTCCCCAGCCACCTGCCTGCACCACCCGGGCAGAGCCGACTCGCATGCCCGTCCCCGGCGCGACGGGAGGCCGCAAAGTAAACAACATTTGGGGCTCTGTGGTCCAAGAGCAGTGCCAGGATGCCGTAGCTGCAGAGCTGGGCATATTTGGCATGGATGGTGAAGTCAGCATGTCCAGCAGAAATGTGGAGACTTACAACTTTGTCCTGGCCCGTAAGATaatggagaaggagagggagctGGAGAATCTGAGCAAAAATGAGGGAGAAGTGAACATGCTGGACGCCCAGCTGGAGGAGTACATGAACGACCGGAACTCACAGGAGGGGTCAGGAGGTGATGCGAAGAGGAAGAGGCCAGCTAAAGACAGACTGGGCCCCAGGGCCGAGATGGACATCAAGGGCCGGTATGAGATCACAGAGGATGACCCTGAGGATAAGGTGACCGATGAGATCGCGCACAGGCTGCGAGAGCCTAAAAAAGACCTGATAGAGCGCGTTGTCACAGTCATCGGTaagaaaaaagccatagaacTGCTCGGAGAGACCGCCACGCTGGAGGAAAGCGGCGGCGTGTACACCATAGACGGCAGCAGGCGACGGACGCCCGGTGGGGTGTATCTCAACCTGCTGAAGAACACGCCCAGCATTAGCAAGGCCCAGGTCAGGAAGATATTCTTTGAGGAGCAACAGAAAGATTTCAAGACCAAGAAGGCCGCCCAGAAGAGGAGGCGCCACATGGTTGCCAAGAAGATGAAGCAGGCCATCGGCACGCTGAACCTTCAGGAGCACGACGACGTCTCCAGGGAGACCTTCGCCAGTGATACCAACGAGGCCTTGGAGTCATTGGAGGAGCCtgcagaagaggaagaggagggtcaGGAGGAAGCTGCTGTGGGCATTGAAGAGACACCTGTGGTGTACAACTCTGCGGACCTGGAAGTCTTCTGAGCTCTGAGCCTGCCGTCTGAACTCTGGGAGGTTTGAACAAGGACATTTAGGATTCAAATTAGAACACGACACTGAAAGCACTGTACTGTCTCCATGGAGTACAGAATCTCACCCGAGTGTCCTTTTTTTGTTTCGTCTTTTAACTAAGCAATAAAAGGAGAGCTTATGTTAGCAGAAATATTGGTTTTGTTTGGTTCAGCATGGGTATGTAGATTTCGGGCACACAGAATGAAAAGTCTGCAAGTTGGTGTGATTTGTGATACAAATGTTTGCCTTTTAAATCAAATTCTTAATTGTCAAAAGCTTACCTGAGTTGGAGTAACAGTGATGCACTcttgtttattttgaaatatagtaactttctttttttataatttctatTAGGATATAATGACATCTTGATTTATTAAATTAACTTGTGTGACTGGAATATAAATAAAGGTGACTTGGGTAAAGTCACTTAAAACAGTAA

Function

NR:

description
phosphorylated adapter RNA export protein

GO: NA

KEGG:

id description
K14291 PHAX; phosphorylated adapter RNA export protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791651.1 True 1887 mRNA 0.51 2 23529757 23531807

Neighbor

gene id symbol gene type direction distance location
cmah LOC101476433,LOC102306063,LOC100691852,LOC101466628,LOC102209249,LOC102786627,LOC103459632 coding downstream 254214 23229083 ~ 23275543 (-)
LOC120553577 NA coding downstream 341995 23177186 ~ 23187762 (-)
LOC120553037 NA coding downstream 413336 23092819 ~ 23116421 (-)
LOC120553034 NA coding downstream 587638 22920182 ~ 22942119 (-)
LOC120553033 LOC103354931,LOC102080527,LOC102775588,LOC101467455 coding downstream 636576 22875923 ~ 22893181 (-)
dnajc2 dnajc2 coding upstream 30353 23562160 ~ 23588760 (-)
slc26a5 NA coding upstream 62545 23594352 ~ 23617076 (-)
cbll1 cbll1 coding upstream 145361 23677168 ~ 23684068 (-)
sbf1 sbf1 coding upstream 186532 23718339 ~ 23809346 (-)
glt8d2 glt8d2 coding upstream 336349 23868156 ~ 23885592 (-)
G229867 NA non-coding downstream 2218 23527105 ~ 23527539 (-)
G229802 NA non-coding downstream 115999 23413116 ~ 23413758 (-)
G229774 NA non-coding downstream 216671 23298709 ~ 23313086 (-)
G229784 NA non-coding downstream 242861 23285567 ~ 23286896 (-)
G229782 NA non-coding downstream 245706 23283529 ~ 23284051 (-)
G229872 pmpcb non-coding upstream 6441 23538248 ~ 23560342 (-)
LOC120553168 NA non-coding upstream 91773 23623580 ~ 23641504 (-)
G229908 NA non-coding upstream 170897 23702704 ~ 23707197 (-)
G229909 NA non-coding upstream 181649 23713456 ~ 23713677 (-)
G229952 NA non-coding upstream 414690 23946497 ~ 23948780 (-)
G229716 NA other downstream 290184 23104760 ~ 23239573 (-)
glipr1a NA other downstream 319260 23203768 ~ 23210497 (-)
LOC120553090 NA other downstream 1718660 21771088 ~ 21811097 (-)
slc38a2 slc38a2 other downstream 2055155 21461076 ~ 21474602 (-)
ptprz1b NA other downstream 2384224 21063691 ~ 21145533 (-)
LOC120553170 NA other upstream 158712 23690519 ~ 23711804 (-)
G229907 NA other upstream 167890 23699697 ~ 23700198 (-)
LOC120553046 NA other upstream 326412 23858219 ~ 23863974 (-)
G229950 gdi2,LOC100708443,LOC102215003 other upstream 376749 23908556 ~ 23914692 (-)
sult4a1 sult4a1,LOC102784496 other upstream 1659454 25191261 ~ 25217693 (-)

Expression


Co-expression Network