dnajc2 (dnajc2)


Basic Information

Item Value
gene id dnajc2
gene name dnajc2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 23562160 ~ 23588760 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791654.1
GTGAGAGCACAGCCGTTTTCGGCACTCTGAAGGAAGGGAGGCCCATGTGGTATGTTAATGATCGGGCCACAGTCTTCAGCACATCAGGAAGCTTTCACTTGATCATTTCGGCACCTGAATGTTCGCGTAGCCCATTTTTCTAAGATGTTGTTAGAAGCGCTGGACGGTGATGAGACAGTTGTCTTTACAGCCGCTGCCGCCTCTGTGCAGATCCAGGTGGAGCCTGTTGGTCGATGGTTCGAGGCCTACGTGAGGAGGAGGAACCGGAATGCATCCGTCTCCTTCCAGGagttggaggaagaagaggagtcCTCAGAGGAGTCGGAGGATGAAGACCTTCAGCTGGAGGAGTACCCGATGCTGCGAACACTTGACCCCAAAGACTGGAAGAATCAAGATCACTATGCTGTCCTGGGACTGCCGCACTTGAGGTACAAAGCCACACAAAAACAGATCAAAGCTGCCCACAAGGGGATTGTGTTGAAGCACCATCCTGACAAGAGGAAAGCTGCAGGAGAGCAGATTGTAGAGGGAGACAATGACTACTTTACCTGTATAACTAAAGCTATAGAAATCCTGTCGGACCCTGTGAAGAGGAGAGCCTTCGACAGCGTAGACCCTACCTTTGACAACAACGTGCCTTCAAAGAGCGAAGGCAAGGAAAACTTTACGGAGGTGTTTTCTTCCGTTTTCGAGAGAAATGCCAGATGGTCTTCCAAAAAGCACGTCCCCTTACTTGGAACCATGGAGTCCTCCTTCGAAGAAGTCGACAATTTTTACTCTTTTTGGTACAACTTTGATTCATGGAGGGAATTCTCATACCTGGATgaagaagagaaggaaaagGCCGAGTGTCGAGATGAGAGGAGATGGATTGAAAAGCAGAATCGAGCCTCCAGAGCtcagaggaagaaggaggagatGAACAGAATACGAACACTAGTTGATACTGCCTACAGCTGTGACCCTAGAATAAAGAAattcaaagaagaagaaaaagccaGGAAGGAGTCTGAGAAGAAGGCTAAAGTCGAAGCcaagaagagagagcaggaagagAAGGAGCGAGCCCGGCAGGCTGAGCTGGAGGCCGCTCGATTGGCGAAGGcgaaggaggaagaagaggccaAGCAGCTAGCCCAGCAGGccaagaaagagaaggagatcCAAAAGAAAGCCATCAAGAAGGAGAGGCAGAAACTCAGGACTACCTGCAAGAACTGGAATTACTTTGCTGACGACGAGGCCGACAGCGTGAAAATGATGGAGGAAGTGGAGAAGCTCTGCGATCGCCTGGAGCTGACGAGCCTGCAGTCGCTGAATGAAATCCTGGCCTCAGGCTCCAAAGAGGATAGCAAGGTAGCTGTGGAGAAGCAGGTGCAGGAGGTGAACGCCCAGCtgcagagggagaaggaggcCGAGGTCCAGATGAGGCAGGCGGCCCGCGGCGCCGAGCAGGccagcggaggaggaggaggagggggggggaagggcTGGAACGAGGAGGACCTCCAGCTGCTCATCAAAGCTGTCAACCTGTTCCCTGCTGGGACCAACGCCAGATGGGAAGTTATCGCCAACTATATGAACCTACACTCCACCAGCGGCACAAAGAGGACGGCCAAAGACGTCATCAACAAAGCCAAGAATCTACAACGGCTAGATCCAGTACAGAAAGACGAGATAAACAGGAAAGCCTTTGAGAAGTTCAAGAAGGAACACGGTGCAGTGGCGCCCACCATAGACAACGCTGTGCCCTCAGAGAGGTTTGACGGCTCCGGTAGCACTGCCTCCTGGACCACCGAGGAACAGAAGCTTCTGGAACAAGCCCTGAAGACCTACCCGGTCAGCACACCCGAGCGCTGGGAGAAGATCGCTGCGGCCGTGCCGGGACGCAGCAAGAAAGACTGTATGAAGAGGTACAAGGAGCTGGTGGAGATGGTCAAAGCCAAGAAAGCCGCACAGGAAAACGTCGCGGGcaagagtaaaaaatgacaagaAATCACAAACGATAGCATCTGTTATTTTAACATTGTTGTGTCGgtctttattttgtattaaagAAGATACGTAAATCCA

Function

symbol description
dnajc2 Predicted to enable chromatin binding activity and ubiquitin modification-dependent histone binding activity. Predicted to be involved in positive regulation of transcription, DNA-templated. Predicted to act upstream of or within chromatin organization. Predicted to be located in cytosol and nucleus. Is expressed in several structures, including immature eye; nervous system; neural plate; pectoral fin; and segmental plate. Orthologous to human DNAJC2 (DnaJ heat shock protein family (Hsp40) member C2).

NR:

description
PREDICTED: dnaJ homolog subfamily C member 2

GO: NA

KEGG:

id description
K09522 DNAJC2; DnaJ homolog subfamily C member 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791654.1 True 2079 mRNA 0.52 16 23562160 23588760

Neighbor

gene id symbol gene type direction distance location
phax NA coding downstream 30353 23529757 ~ 23531807 (-)
cmah LOC101476433,LOC102306063,LOC100691852,LOC101466628,LOC102209249,LOC102786627,LOC103459632 coding downstream 286617 23229083 ~ 23275543 (-)
LOC120553577 NA coding downstream 374398 23177186 ~ 23187762 (-)
LOC120553037 NA coding downstream 445739 23092819 ~ 23116421 (-)
LOC120553034 NA coding downstream 620041 22920182 ~ 22942119 (-)
slc26a5 NA coding upstream 5592 23594352 ~ 23617076 (-)
cbll1 cbll1 coding upstream 88408 23677168 ~ 23684068 (-)
sbf1 sbf1 coding upstream 129579 23718339 ~ 23809346 (-)
glt8d2 glt8d2 coding upstream 279396 23868156 ~ 23885592 (-)
net1 net1,LOC104963784,LOC103383002,LOC107560732 coding upstream 477649 24066409 ~ 24109573 (-)
G229872 pmpcb non-coding downstream 1818 23538248 ~ 23560342 (-)
G229867 NA non-coding downstream 34621 23527105 ~ 23527539 (-)
G229802 NA non-coding downstream 148402 23413116 ~ 23413758 (-)
G229774 NA non-coding downstream 249074 23298709 ~ 23313086 (-)
G229784 NA non-coding downstream 275264 23285567 ~ 23286896 (-)
LOC120553168 NA non-coding upstream 34820 23623580 ~ 23641504 (-)
G229908 NA non-coding upstream 113944 23702704 ~ 23707197 (-)
G229909 NA non-coding upstream 124696 23713456 ~ 23713677 (-)
G229952 NA non-coding upstream 357737 23946497 ~ 23948780 (-)
G229987 NA non-coding upstream 491767 24080527 ~ 24081153 (-)
G229716 NA other downstream 322587 23104760 ~ 23239573 (-)
glipr1a NA other downstream 351663 23203768 ~ 23210497 (-)
LOC120553090 NA other downstream 1751063 21771088 ~ 21811097 (-)
slc38a2 slc38a2 other downstream 2087558 21461076 ~ 21474602 (-)
ptprz1b NA other downstream 2416627 21063691 ~ 21145533 (-)
LOC120553170 NA other upstream 101759 23690519 ~ 23711804 (-)
G229907 NA other upstream 110937 23699697 ~ 23700198 (-)
LOC120553046 NA other upstream 269459 23858219 ~ 23863974 (-)
G229950 gdi2,LOC100708443,LOC102215003 other upstream 319796 23908556 ~ 23914692 (-)
sult4a1 sult4a1,LOC102784496 other upstream 1602501 25191261 ~ 25217693 (-)

Expression


Co-expression Network