LOC120553346 (ergic2)


Basic Information

Item Value
gene id LOC120553346
gene name ergic2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 9268198 ~ 9273908 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791669.1
ACGCACTCACGAGTATGTCAGCACCATGCATGTATCATGGTGCACTAAAATTCAGATACCAAACAGCAGCTAAAACGTATTGAGTAGTAGGGCTTCCAGGGATCCTGTACCGCGATTTAACATCTAAGTAGATGATAAAAGAGgaggtggagagcgGCCCTGAACCTGAAGATGAGGCGTCTGTCACGGAGGAAAGCCCTGAGTTTGGTGAGGGAGCTGGACGCTTTCCCCAAAGTGTCAGACAGCTACGTGGAGACCTCAGCCTCAGGAGGAACAGTGTCGCTGATAGCTTTTGGTGCCATGGCTCTTCTGGCTATTTTAGAGTTCTTTGTTTATAGAGACACTTGGATGAAGTATGAATATGAAGTTGACAAGGATTTTACCAGTAAATTGAGAATAAACATTGACATTACAGTCGCCATGAAATGCCAGCATGTTGGAGCAGATATTCTGGACCTGGCGGAGACCATGATCACATCCAGTGGCCTCCAGTACGAACCGGTTATTTTTGAACTAACTCCACGACAGAGACTGTGGCAAAGGACATTGCATCTCATACAGAACAGGCTGAGAGAGGAACACGCTCTTCAGGAAATCCTCTACAAAACTCTCCTGAAAGGAGGTCCCACTGCCCTGCCGCCACGggaggATGCCCCTATGGAGCCGCTCAAGGCTTGCAGGATACACGGGCATGTCTACGTCAATAAGGTAGCAGGAAACCTACACATCACTGTGGGAAAGCCCATTCACCATCCTCAGGGTCATGCCCATATCGCAGCTTTTGTGAGCCACGAGACGTACAACTTCTCCCATCGAATAGACCATTTATCTTTTGGGGAAGAGATACCGGGCATCATCAATCCTCTGGACGGCACAGAGAAAATCACTTATAACAATAACCAGATGTTCCAGTACTTCATCACAGTGGTTCCAACCAGACTGAACACATACAAGAtatctgcagacacacaccagTTTTCTGTGACTGAGCGGGAGAGAGTGATAAACCATGCAGCGGGCAGTCACGGCGTTTCCGGCATCTTTGTCAAGTACGACACCAGCTCTCTGATGGTGACAGTCAGCGAGCAGCATATGCCACTGTGGCAGTTCCTGGTGCGACTGTGCGGTATTATCGGGGGTATATTCTCCACGACAGGCATGCTCCATGGGCTTGTTGGCTTCTGTTTTGATGCCATCTGCTGTCGCCTCAAACTTGGAGTCTACAGGCTCAGAGAGGACGTGCAGCTACACAACCAGATGAACAATCTAAACAATCACCAGACTCCTTTGTTGGCTGACAATGGCCCTCAGGACTAGCAGTTTTTCAGCGACCAGGCTTTTGGTCATCGCCAAACGTCATCAATTTGTCATTAAATTGTGTTTATTCTACTGAAGGTAAAGCTGTCTGTTAAACACTGTAAACTTGCAAATAGTAAGTTCACATCAGATTGTTGCACTTCAGGAAATGTGCTGCCTGTGACTGCACttatacatgtgttgtttgaaaGATTTCCTTTCTGTGATGGGGTTTGTACCTTTAGAAATGTGGTAGGCTTTCTGTTCCACATGCTGTATAGCACATACAGCTGATTGTTTGTACCATTGTCcattaaaaagtttaaatatcCACAAATTCAAAAATACAAGTGAGGATTTGTTTCAAAGGATTACTGtgtgtaaaacatttaaatctTCAGTTAAGTCACAAAAAGATGTGGATGGTCTTCAAATACTCTAGTCAAGTTTGGAGAGGTTGACTGCACTCATTTAGTATTGTGTCATCCCAATCTTTGTAATAGCGTGCAATTATCTCTATGCAGTTGAAATGCAGGCATTTTTTAAAACCCTATATCAAAAAGGCCAAAAGAATGAGTTTTAATGTGACTGGTAATTTTGAGGTTTGGTAAAGAAACTCTATGGTGAggtagaaataaagttgaatgGGCTGCAGCACACTTGCACTTTCAAGTTTTGCCAAGCAGATTGAACAGGGAATAAAAGGTGGTCAAACATTTTGTAAATGACACCAGAAA
>XM_039791670.1
ACGCACTCACGAGTATGTCAGCACCATGCATGTATCATGGTGCACTAAAATTCAGATACCAAACAGCAGCTAAAACGTATTGAGTAGTAGGGCTTCCAGGGATCCTGTACCGCGATTTAACATCTAAGTAGATGATAAAAGAGgtggagagcgGCCCTGAACCTGAAGATGAGGCGTCTGTCACGGAGGAAAGCCCTGAGTTTGGTGAGGGAGCTGGACGCTTTCCCCAAAGTGTCAGACAGCTACGTGGAGACCTCAGCCTCAGGAGGAACAGTGTCGCTGATAGCTTTTGGTGCCATGGCTCTTCTGGCTATTTTAGAGTTCTTTGTTTATAGAGACACTTGGATGAAGTATGAATATGAAGTTGACAAGGATTTTACCAGTAAATTGAGAATAAACATTGACATTACAGTCGCCATGAAATGCCAGCATGTTGGAGCAGATATTCTGGACCTGGCGGAGACCATGATCACATCCAGTGGCCTCCAGTACGAACCGGTTATTTTTGAACTAACTCCACGACAGAGACTGTGGCAAAGGACATTGCATCTCATACAGAACAGGCTGAGAGAGGAACACGCTCTTCAGGAAATCCTCTACAAAACTCTCCTGAAAGGAGGTCCCACTGCCCTGCCGCCACGggaggATGCCCCTATGGAGCCGCTCAAGGCTTGCAGGATACACGGGCATGTCTACGTCAATAAGGTAGCAGGAAACCTACACATCACTGTGGGAAAGCCCATTCACCATCCTCAGGGTCATGCCCATATCGCAGCTTTTGTGAGCCACGAGACGTACAACTTCTCCCATCGAATAGACCATTTATCTTTTGGGGAAGAGATACCGGGCATCATCAATCCTCTGGACGGCACAGAGAAAATCACTTATAACAATAACCAGATGTTCCAGTACTTCATCACAGTGGTTCCAACCAGACTGAACACATACAAGAtatctgcagacacacaccagTTTTCTGTGACTGAGCGGGAGAGAGTGATAAACCATGCAGCGGGCAGTCACGGCGTTTCCGGCATCTTTGTCAAGTACGACACCAGCTCTCTGATGGTGACAGTCAGCGAGCAGCATATGCCACTGTGGCAGTTCCTGGTGCGACTGTGCGGTATTATCGGGGGTATATTCTCCACGACAGGCATGCTCCATGGGCTTGTTGGCTTCTGTTTTGATGCCATCTGCTGTCGCCTCAAACTTGGAGTCTACAGGCTCAGAGAGGACGTGCAGCTACACAACCAGATGAACAATCTAAACAATCACCAGACTCCTTTGTTGGCTGACAATGGCCCTCAGGACTAGCAGTTTTTCAGCGACCAGGCTTTTGGTCATCGCCAAACGTCATCAATTTGTCATTAAATTGTGTTTATTCTACTGAAGGTAAAGCTGTCTGTTAAACACTGTAAACTTGCAAATAGTAAGTTCACATCAGATTGTTGCACTTCAGGAAATGTGCTGCCTGTGACTGCACttatacatgtgttgtttgaaaGATTTCCTTTCTGTGATGGGGTTTGTACCTTTAGAAATGTGGTAGGCTTTCTGTTCCACATGCTGTATAGCACATACAGCTGATTGTTTGTACCATTGTCcattaaaaagtttaaatatcCACAAATTCAAAAATACAAGTGAGGATTTGTTTCAAAGGATTACTGtgtgtaaaacatttaaatctTCAGTTAAGTCACAAAAAGATGTGGATGGTCTTCAAATACTCTAGTCAAGTTTGGAGAGGTTGACTGCACTCATTTAGTATTGTGTCATCCCAATCTTTGTAATAGCGTGCAATTATCTCTATGCAGTTGAAATGCAGGCATTTTTTAAAACCCTATATCAAAAAGGCCAAAAGAATGAGTTTTAATGTGACTGGTAATTTTGAGGTTTGGTAAAGAAACTCTATGGTGAggtagaaataaagttgaatgGGCTGCAGCACACTTGCACTTTCAAGTTTTGCCAAGCAGATTGAACAGGGAATAAAAGGTGGTCAAACATTTTGTAAATGACACCAGAAA
>XM_039791672.1
CTGAACCTGAAGATGAGGCGTCTGTCACGGAGGAAAGCCCTGAGTTTGGTGAGGGAGCTGGACGCTTTCCCCAAAGTGTCAGACAGCTACGTGGAGACCTCAGCCTCAGGAGGAACAGCTACGCAGTGTTCTGAGCAGCCTGGATGAAAGGCAGCAGCTGATACAACAATCATAACCACGAGAGACTTGAGACATAACTTGGACTCGAGTTGAAAgacttTGTCGCTGATAGCTTTTGGTGCCATGGCTCTTCTGGCTATTTTAGAGTTCTTTGTTTATAGAGACACTTGGATGAAGTATGAATATGAAGTTGACAAGGATTTTACCAGTAAATTGAGAATAAACATTGACATTACAGTCGCCATGAAATGCCAGCATGTTGGAGCAGATATTCTGGACCTGGCGGAGACCATGATCACATCCAGTGGCCTCCAGTACGAACCGGTTATTTTTGAACTAACTCCACGACAGAGACTGTGGCAAAGGACATTGCATCTCATACAGAACAGGCTGAGAGAGGAACACGCTCTTCAGGAAATCCTCTACAAAACTCTCCTGAAAGGAGGTCCCACTGCCCTGCCGCCACGggaggATGCCCCTATGGAGCCGCTCAAGGCTTGCAGGATACACGGGCATGTCTACGTCAATAAGGTAGCAGGAAACCTACACATCACTGTGGGAAAGCCCATTCACCATCCTCAGGGTCATGCCCATATCGCAGCTTTTGTGAGCCACGAGACGTACAACTTCTCCCATCGAATAGACCATTTATCTTTTGGGGAAGAGATACCGGGCATCATCAATCCTCTGGACGGCACAGAGAAAATCACTTATAACAATAACCAGATGTTCCAGTACTTCATCACAGTGGTTCCAACCAGACTGAACACATACAAGAtatctgcagacacacaccagTTTTCTGTGACTGAGCGGGAGAGAGTGATAAACCATGCAGCGGGCAGTCACGGCGTTTCCGGCATCTTTGTCAAGTACGACACCAGCTCTCTGATGGTGACAGTCAGCGAGCAGCATATGCCACTGTGGCAGTTCCTGGTGCGACTGTGCGGTATTATCGGGGGTATATTCTCCACGACAGGCATGCTCCATGGGCTTGTTGGCTTCTGTTTTGATGCCATCTGCTGTCGCCTCAAACTTGGAGTCTACAGGCTCAGAGAGGACGTGCAGCTACACAACCAGATGAACAATCTAAACAATCACCAGACTCCTTTGTTGGCTGACAATGGCCCTCAGGACTAGCAGTTTTTCAGCGACCAGGCTTTTGGTCATCGCCAAACGTCATCAATTTGTCATTAAATTGTGTTTATTCTACTGAAGGTAAAGCTGTCTGTTAAACACTGTAAACTTGCAAATAGTAAGTTCACATCAGATTGTTGCACTTCAGGAAATGTGCTGCCTGTGACTGCACttatacatgtgttgtttgaaaGATTTCCTTTCTGTGATGGGGTTTGTACCTTTAGAAATGTGGTAGGCTTTCTGTTCCACATGCTGTATAGCACATACAGCTGATTGTTTGTACCATTGTCcattaaaaagtttaaatatcCACAAATTCAAAAATACAAGTGAGGATTTGTTTCAAAGGATTACTGtgtgtaaaacatttaaatctTCAGTTAAGTCACAAAAAGATGTGGATGGTCTTCAAATACTCTAGTCAAGTTTGGAGAGGTTGACTGCACTCATTTAGTATTGTGTCATCCCAATCTTTGTAATAGCGTGCAATTATCTCTATGCAGTTGAAATGCAGGCATTTTTTAAAACCCTATATCAAAAAGGCCAAAAGAATGAGTTTTAATGTGACTGGTAATTTTGAGGTTTGGTAAAGAAACTCTATGGTGAggtagaaataaagttgaatgGGCTGCAGCACACTTGCACTTTCAAGTTTTGCCAAGCAGATTGAACAGGGAATAAAAGGTGGTCAAACATTTTGTAAATGACACCAGAAA

Function

symbol description
ergic2 Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport and retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum. Predicted to act upstream of or within vesicle-mediated transport. Predicted to be located in Golgi apparatus; endoplasmic reticulum membrane; and endoplasmic reticulum-Golgi intermediate compartment membrane. Predicted to be integral component of membrane. Predicted to be active in COPII-coated ER to Golgi transport vesicle; endoplasmic reticulum; and membrane. Orthologous to human ERGIC2 (ERGIC and golgi 2).

NR:

description
PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 2

GO: NA

KEGG:

id description
K20366 ERGIC2, ERV41; endoplasmic reticulum-Golgi intermediate compartment protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791669.1 True 2033 mRNA 0.44 14 9268198 9273908
XM_039791670.1 False 2030 mRNA 0.44 14 9268198 9273908
XM_039791672.1 False 1976 mRNA 0.44 14 9269069 9273908

Neighbor

gene id symbol gene type direction distance location
guca1a LOC103358093,LOC102788764 coding upstream 148213 9116805 ~ 9119985 (+)
llph llph coding upstream 178650 9087173 ~ 9089548 (+)
fgf23 fgf23 coding upstream 248069 9017086 ~ 9020129 (+)
LOC120553653 fgf6,LOC100708453,LOC101478942,LOC103358103 coding upstream 258011 9006558 ~ 9010187 (+)
LOC120553730 LOC103358107,LOC100702291,LOC101477928 coding upstream 335221 8927072 ~ 8932977 (+)
cd36 NA coding downstream 400083 9673991 ~ 9679815 (+)
chrm2a chrm2,LOC103140231,LOC106927335,LOC100534441,LOC102208075 coding downstream 678692 9952600 ~ 10029904 (+)
LOC120553071 NA coding downstream 826788 10100696 ~ 10103605 (+)
LOC120553783 LOC104962829,LOC102309285,LOC102208629,LOC100697441,LOC102795594,LOC101464871 coding downstream 831023 10104931 ~ 10107801 (+)
LOC120553300 NA coding downstream 834411 10108319 ~ 10116627 (+)
G226810 NA non-coding upstream 63747 9179139 ~ 9204451 (+)
G226755 NA non-coding upstream 228372 9037773 ~ 9039826 (+)
G226748 NA non-coding upstream 251923 9016073 ~ 9016275 (+)
G226747 NA non-coding upstream 252297 9015615 ~ 9015901 (+)
G226717 NA non-coding upstream 254552 9012843 ~ 9013646 (+)
G226885 NA non-coding downstream 377339 9651247 ~ 9654254 (+)
G226918 NA non-coding downstream 478036 9751944 ~ 9754116 (+)
G226921 mtpn non-coding downstream 522565 9796473 ~ 9826525 (+)
G226922 NA non-coding downstream 532334 9806242 ~ 9806602 (+)
G226930 LOC104947167 non-coding downstream 593667 9867575 ~ 9868085 (+)
ndufb2 ndufb2,LOC102790702 other upstream 26849 9237226 ~ 9241349 (+)
lhfpl3 lhfpl3,LOC101483460 other upstream 94978 9134594 ~ 9173220 (+)
rps16 rps16,LOC103382554 other upstream 835501 8426635 ~ 8432697 (+)
LOC120553156 LOC104945813 other upstream 1698895 7566655 ~ 7569303 (+)
LOC120553154 LOC104945813,LOC103356648 other upstream 1736121 7525892 ~ 7532077 (+)
G227121 kera other downstream 1423346 10697254 ~ 10699718 (+)
G227141 dcn,LOC103382665 other downstream 1458161 10732069 ~ 10737503 (+)
impdh1b LOC104968094,LOC103355171,LOC102293685,LOC102194436,LOC104918784 other downstream 1674377 10948285 ~ 10986201 (+)
G227216 NA other downstream 1828928 11102836 ~ 11112905 (+)
G227278 LOC104928793 other downstream 2415261 11689169 ~ 11757317 (+)

Expression


Co-expression Network