upf2 (upf2)


Basic Information

Item Value
gene id upf2
gene name upf2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 4495890 ~ 4522614 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791692.1
CAGTTAGGCAAAATTTGTGGAACAACCGTGAGAGGGTCCTTCTGTTGTTCACACGGAAACCAACCCCAATGACCGATGTTTGTTATGCTACATTAGCAGTATGCCTGCTGAACGCAAGCGCTCCGTAAACATGGACGAGAAAGACGTTTGCACCTTCAGTAACAAGGAAAAAGAGAAGGACAGAGATGGCGAGAGAAGACCAGCGTCTGCCCGAGACAAAGCAAAAGATGAGGCCAAAGTGAGCGGTAAAAAAGACAGCGgcaaggaggagaagagaaagcgcctcgaggaggagaagaagaagaaagaggaaaaggagcgaagaaagaaagaggaggaaaagcaGAAAGCGGAGGAggagcagaagaagaaagaggaggaggagaagagacagcaggaggaggaggagcggaAGCTTCAAGAGGAGGAAGTCAAAAGACAgcgggaggaggaggcagcTCTCCTCAAGGAAAAGGAGGAGGGGCATCAGCTGCACCAGGAGGCCTGGGAGCGCAATCAGTGCAGGAAGGAACTCCGCAGCAAGAACCAGAACGCCCAAGAGGGTCGGCCCGAAGAGGCCTTCTTCAGCCGACTGGACTCCAGCCTTAAAAAGAACACCGCCTTTGTCAAGAAGCTGCGTACACTCACCGAACAGCAACGAGACTCGCTCTCCAATGACTTTGCCTCACTGAACCTCAGCAAGTACATCGGCGAGGCCGTGAGCTCTGTCGTGGAGGCCAAGCTGAAAATCTCCGACGTCGGCTGCGCTGTCCATCTCTGCTCCCTCTTCCACCAGCGGTACGCTGAGTTCGCTCCGTTGCTGCTCCAGGCGTGGAAGAAGCACTTTGAAGCGAGGAAGGAGGACAAGGCGCCCAACGTGAGCAAGCTGCGCACAGACCTGCGCTTCATCGCCGAGCTCACCATCGTCGGCCTCTTCACCGACAAAGAAGGGCTTTCGCTGATTTACGAGCAGCTGAAGAACATTATCGGGACCGACCGGGAGACGCACACTCATGTGTCTGTGGTAATCAGCTTCTGTAAGCACTGTGGGGACGACATCGCTGGCCTTTTGCCCCGCAAGGTGAAACTAGCTGCCGAGAAGTTCGGTTTGGGCTTCCCTCCGAGCGAGATAATCAGCACGGAGAAACAGCAGCCCTTCCAGAACCTGCTACGGGAGTACTTCACATCACTCACCAAACACCTGAAGAAGGACCACCGGGAGCTGCAGAACACTGAGAGGCAGAACAGGCGTATCCTACATTCCAAAGGGGAGCTGAGTGAGGATAGACACAAGCAGTATGAAGAGTTTGCCACTTCCTACCAGAAGCTGCTGGCGAACACTCAGTCCCTGGCTGATCTGCTGGATGAAAACATGCCCGAGCTGCCCGTGGACAAGACTGTGCAGGAGGAGCACGGCCCCGGCATTGACATTTTCACCCCTGGAAAGCCCGGAGAGTATGACCTGGAGGGAGGGATCTGGGAAGATGAAGACGCTCGTAACTTCTACGAGAACTTGGTGGACCTGAAGGCCTTCGTCCCTGCCATCCTCTTCAAGGACAACGAGAAGAGCAGCCAAGGCAAAGACAAGGACGAAGCCAAAGATGGCAAAGAGGGGAAAGACGCGGCCAGCACCACAGAGGAActggagctggagctggaggCTCTGGACATCGCAGATGAACCTATGGAACTGGAGGGACCAGACGAGGCAGAGAATGAAGAACTGGCCAAAAAACTGCTGGATGAGCAAGAACAAGAGGATGAAGAGGCCAACACAGGGTCCCATTTGAAGCTAATCGTGGACGCCTTCATCCAACAGCTCCCCAACTGTGTCAACAGAGACCTCATAGACAAGGCTGCCATGGACTTCTGCATGAACATGAACACCAAGTCCAACAGGAGGAAGCTCGTCCGAGCCCTCTTCACTGTCCCCAGGCAGAGGTTGGATCTTCTGCCCTTCTACTCTCGCCTGGTGGCAACCCTTCATCCCTGCATGTCAGACGTGGCTGAGGACCTTTGCTCCATGCTGAAGGGAGACTTCAGGTTTCACATGCGGAAGAAGGACCAAATCAACAttgagacaaaaaacaaaacggtCAGATTTATCGGGGAACTGGCCAAGTTCAAAATGTACTCAAAAACGGACACGCTTCATTGTCTCAAGATGCTGCTGTCTGATTTCACTCATCACCATATAGAGATGGCCTGCACACTGCTGGAGACCTGCGGCCGCTTCCTCTTCAGATCCCCCGAATCTCACCTGCGTACCAGCGTCTTGCTGGAGCAAATGATGCGCAAAAAGCAGGCCCAGCATCTGGACGCCCGCTATGTCACGATGGTGGAGAACGCCTACTACTACTGCAACCCCCCACCCATGGAGAAGACGGTGAAGAAGAAGAGGCCCCCGCTGCAGGAGTACATCCGCAAGCTGCTCTACAAGGACCTGTCCAAGGTCACCACGGAGAAGGTGCTGAGGCAGATGCGCAAGCTGCCCTGGCACGACCCCGAGGTCAAGAGCTACCTGATCTGCTGCATGGTCAACATCTGGAACGTCAAGTACAACAGCATCCACTGTGTGGCCAACCTGCTGGCCGGCCTGGTGGCCTACCAGGAGGACGTGGGCATCCATGTGGTGGACGGAGTGCTGGAGGACATCCGGCTGGGCATGGAGGTCAACCAGCCCAAGTTCAACCAGCGGCGGATCAGCAGCGCCAAGTTCCTGGGCGAGCTCTACAACTACCGCATGGTGGAGTCGGCCGTCATTTTCCGCACCCTCTTCTCCTTCATCTCCTTTGGGATCAATCAGGACGGCAGCCCCAGCGCGCTGGACCCTCCGGAGCACCTGTTCCGCATCCGCTTGGTCTGCACTTTGCTGGATACCTGCGGCCAGTACTTTGACCGAGGCTCCAGCAAGAGGAAGCTGGACTGTTTCCTCATCTACTTCCAGCGGTACATCTGGTGGAAAAAGAGCATTGATGTTTGGACCAAGGACCACCCGTTCCCCATCGACATTGACTACATGATCAGCGACACCCTAGAGCTGCTCAGGCCCAAGATGAGGCTCAGCTGCTCCTTGGAGGAAGCCACCAAACAGGTCACCGACCTGGAGAGGGAGGTGCTCTACAAACTAGGTCTTGCCATGGAGAAGGACGGTCGCTCCAGTGCCATGAGCGAAGGCGAGGTTCTCGACGAGGAAGACGACGATGGCGATGACGACGAAGAGGGAGGTGCAGAGACTGAGGAGCAGTCGGGCAACGAGAGTGAAATGAACGAACAGGAAGAGGATGAAGGGTCAGAGAAcgaagaagaggagagggaggaagaggaagaagagaacaCCGACTACCTGACCGACtccaataaagaaaatgagaCGGATGAGGAGAACAATGAGGTGACCATCCGCGGCGGTGGACTGAAGCATGTGGCCTGCGCCGAGGACGAGGACTTCATTCAGGCTCTGGATAAGATGATGCTGGAGAACCTGCAGCAGCGCAGCGGCGAGACGGTGAAGGTGCACCAGCTGGACGTGGCCATTCCACTGCAGCTGAAGAGTCAGCTGAAGAAGGGGGGCTCCAGAGAGCAGTGCATCGGGGAGGCGGACTCGGACATCTCCGACACCATGCAGTTCGTCATGCTGACACGCAAGGGCAACAAGCAGCAGTATAAGATCCTGAACGTGCCTCTGTCATCCCACCTGGCGGCGAACCACTTCAACCAGCAGCAAGCCGAACAGGAGGAGCGCATGAGGATGAAGAAACTCACCCTGGACATCAATGAGAGACAGGAGCAGGAGGACTACCAGGagaTGATGCAGTCCCTCGCACAGCGTCCGGCTCCGGCCAACACCAACCGGGAGCGCCGGCCTCGCTACCAGCACCCGAAAGGCGCTCCCAACGCCGACCTCATCTTCAAGACCGGAGGAAGGAGACGCTGATTGGAGTCTGGGTCCGGGCTGAACGAGCGAGCAAGCAAGAGAGCGAATGAACaagcgagagagaaagagggggagagaaaaagaagatcGGAAGGGATAACCCGGTCTAAACAGGGGAACGAGTCCTCCAGACGCCCACCCTGAAGCCGGGACAGACCAAAACCCCTGACCTGAACGCACCCTTCTTACCCTGCCGAGGGGGCCCGAAGCccgaggaggagagacagaaccGGGAGGgggggaggtcagaggtcaggggtCAGACAGTTGGCTCTCTTTGCgt
>XM_039791693.1
CAGTTAGGCAAAATTTGTGGAACAACCGTGAGAGGGTCCTTCTGTTGTTCACACGGAAACCAACCCCAATGACCGATGTTTGTTATGCTACATTAGCAGTATGCCTGCTGAACGCAAGCGCTCCGTAAACATGGACGAGAAAGACGTTTGCACCTTCAGTAACAAGGAAAAAGAGAAGGACAGAGATGGCGAGAGAAGACCAGCGTCTGCCCGAGACAAAGCAAAAGATGAGGCCAAAGTGAGCGGTAAAAAAGACAGCGgcaaggaggagaagagaaagcgcctcgaggaggagaagaagaagaaagaggaaaaggagcgaagaaagaaagaggaggaaaagcaGAAAGCGGAGGAggagcagaagaagaaagaggaggaggagaagagacagcaggaggaggaggagcggaAGCTTCAAGAGGAGGAAGTCAAAAGACAgcgggaggaggaggcagcTCTCCTCAAGGAAAAGGAGGAGGGGCATCAGCTGCACCAGGAGGCCTGGGAGCGCAATCAGTGCAGGAAGGAACTCCGCAGCAAGAACCAGAACGCCCAAGAGGGTCGGCCCGAAGAGGCCTTCTTCAGCCGACTGGACTCCAGCCTTAAAAAGAACACCGCCTTTGTCAAGAAGCTGCGTACACTCACCGAACAGCAACGAGACTCGCTCTCCAATGACTTTGCCTCACTGAACCTCAGCAAGTACATCGGCGAGGCCGTGAGCTCTGTCGTGGAGGCCAAGCTGAAAATCTCCGACGTCGGCTGCGCTGTCCATCTCTGCTCCCTCTTCCACCAGCGGTACGCTGAGTTCGCTCCGTTGCTGCTCCAGGCGTGGAAGAAGCACTTTGAAGCGAGGAAGGAGGACAAGGCGCCCAACGTGAGCAAGCTGCGCACAGACCTGCGCTTCATCGCCGAGCTCACCATCGTCGGCCTCTTCACCGACAAAGAAGGGCTTTCGCTGATTTACGAGCAGCTGAAGAACATTATCGGGACCGACCGGGAGACGCACACTCATGTGTCTGTGGTAATCAGCTTCTGTAAGCACTGTGGGGACGACATCGCTGGCCTTTTGCCCCGCAAGGTGAAACTAGCTGCCGAGAAGTTCGGTTTGGGCTTCCCTCCGAGCGAGATAATCAGCACGGAGAAACAGCAGCCCTTCCAGAACCTGCTACGGGAGTACTTCACATCACTCACCAAACACCTGAAGAAGGACCACCGGGAGCTGCAGAACACTGAGAGGCAGAACAGGCGTATCCTACATTCCAAAGGGGAGCTGAGTGAGGATAGACACAAGCAGTATGAAGAGTTTGCCACTTCCTACCAGAAGCTGCTGGCGAACACTCAGTCCCTGGCTGATCTGCTGGATGAAAACATGCCCGAGCTGCCCGTGGACAAGACTGTGCAGGAGGAGCACGGCCCCGGCATTGACATTTTCACCCCTGGAAAGCCCGGAGAGTATGACCTGGAGGGAGGGATCTGGGAAGATGAAGACGCTCGTAACTTCTACGAGAACTTGGTGGACCTGAAGGCCTTCGTCCCTGCCATCCTCTTCAAGGACAACGAGAAGAGCAGCCAAGGCAAAGACAAGGACGAAGCCAAAGATGGCAAAGAGGGGAAAGACGCGGCCAGCACCACAGAGGAActggagctggagctggaggCTCTGGACATCGCAGATGAACCTATGGAACTGGAGGGACCAGACGAGGCAGAGAATGAAGAACTGGCCAAAAAACTGCTGGATGAGCAAGAACAAGAGGATGAAGAGGCCAACACAGGGTCCCATTTGAAGCTAATCGTGGACGCCTTCATCCAACAGCTCCCCAACTGTGTCAACAGAGACCTCATAGACAAGGCTGCCATGGACTTCTGCATGAACATGAACACCAAGTCCAACAGGAGGAAGCTCGTCCGAGCCCTCTTCACTGTCCCCAGGCAGAGGTTGGATCTTCTGCCCTTCTACTCTCGCCTGGTGGCAACCCTTCATCCCTGCATGTCAGACGTGGCTGAGGACCTTTGCTCCATGCTGAAGGGAGACTTCAGGTTTCACATGCGGAAGAAGGACCAAATCAACAttgagacaaaaaacaaaacggtCAGATTTATCGGGGAACTGGCCAAGTTCAAAATGTACTCAAAAACGGACACGCTTCATTGTCTCAAGATGCTGCTGTCTGATTTCACTCATCACCATATAGAGATGGCCTGCACACTGCTGGAGACCTGCGGCCGCTTCCTCTTCAGATCCCCCGAATCTCACCTGCGTACCAGCGTCTTGCTGGAGCAAATGATGCGCAAAAAGCAGGCCCAGCATCTGGACGCCCGCTATGTCACGATGGTGGAGAACGCCTACTACTACTGCAACCCCCCACCCATGGAGAAGACGGTGAAGAAGAAGAGGCCCCCGCTGCAGGAGTACATCCGCAAGCTGCTCTACAAGGACCTGTCCAAGGTCACCACGGAGAAGGTGCTGAGGCAGATGCGCAAGCTGCCCTGGCACGACCCCGAGGTCAAGAGCTACCTGATCTGCTGCATGGTCAACATCTGGAACGTCAAGTACAACAGCATCCACTGTGTGGCCAACCTGCTGGCCGGCCTGGTGGCCTACCAGGAGGACGTGGGCATCCATGTGGTGGACGGAGTGCTGGAGGACATCCGGCTGGGCATGGAGGTCAACCAGCCCAAGTTCAACCAGCGGCGGATCAGCAGCGCCAAGTTCCTGGGCGAGCTCTACAACTACCGCATGGTGGAGTCGGCCGTCATTTTCCGCACCCTCTTCTCCTTCATCTCCTTTGGGATCAATCAGGACGGCAGCCCCAGCGCGCTGGACCCTCCGGAGCACCTGTTCCGCATCCGCTTGGTCTGCACTTTGCTGGATACCTGCGGCCAGTACTTTGACCGAGGCTCCAGCAAGAGGAAGCTGGACTGTTTCCTCATCTACTTCCAGCGGTACATCTGGTGGAAAAAGAGCATTGATGTTTGGACCAAGGACCACCCGTTCCCCATCGACATTGACTACATGATCAGCGACACCCTAGAGCTGCTCAGGCCCAAGATGAGGCTCAGCTGCTCCTTGGAGGAAGCCACCAAACAGGTCACCGACCTGGAGAGGGAGGTGCTCTACAAACTAGGTCTTGCCATGGAGAAGGACGGTCGCTCCAGTGCCATGAGCGAAGGCGAGGTTCTCGACGAGGAAGACGACGATGGCGATGACGACGAAGAGGGAGGTGCAGAGACTGAGGAGCAGTCGGGCAACGAGAGTGAAATGAACGAACAGGAAGAGGATGAAGGGTCAGAGAAcgaagaagaggagagggaggaagaggaagaagagaacaCCGACTACCTGACCGACtccaataaagaaaatgagaCGGATGAGGAGAACAATGAGGTGACCATCCGCGGCGGTGGACTGAAGCATGTGGCCTGCGCCGAGGACGAGGACTTCATTCAGGCTCTGGATAAGATGATGCTGGAGAACCTGCAGCAGCGCAGCGGCGAGACGGTGAAGGTGCACCAGCTGGACGTGGCCATTCCACTGCAGCTGAAGAGTCAGCTGAAGAAGGGGGGCTCCAGAGAGCAGTGCATCGGGGAGGCGGACTCGGACATCTCCGACACCATGCAGTTCGTCATGCTGACACGCAAGGGCAACAAGCAGCAGTATAAGATCCTGAACGTGCCTCTGTCATCCCACCTGGCGGCGAACCACTTCAACCAGCAGCAAGCCGAACAGGAGGAGCGCATGAGGATGAAGAAACTCACCCTGGACATCAATGAGAGACAGGAGCAGGAGGACTACCAGGagaTGATGCAGTCCCTCGCACAGCGTCCGGCTCCGGCCAACACCAACCGGGAGCGCCGGCCTCGCTACCAGCACCCGAAAGGCGCTCCCAACGCCGACCTCATCTTCAAGACCGGAGGAAGACGCTGATTGGAGTCTGGGTCCGGGCTGAACGAGCGAGCAAGCAAGAGAGCGAATGAACaagcgagagagaaagagggggagagaaaaagaagatcGGAAGGGATAACCCGGTCTAAACAGGGGAACGAGTCCTCCAGACGCCCACCCTGAAGCCGGGACAGACCAAAACCCCTGACCTGAACGCACCCTTCTTACCCTGCCGAGGGGGCCCGAAGCccgaggaggagagacagaaccGGGAGGgggggaggtcagaggtcaggggtCAGACAGTTGGCTCTCTTTGCgt
>XM_039791694.1
CAGTTAGGCAAAATTTGTGGAACAACCGTGAGAGGGTCCTTCTGTTGTTCACACGGAAACCAACCCCAATGACCGATGTTTGTTATGCTACATTAGCAGTATGCCTGCTGAACGCAAGCGCTCCGTAAACATGGACGAGAAAGACGTTTGCACCTTCAGTAACAAGGAAAAAGAGAAGGACAGAGATGGCGAGAGAAGACCAGCGTCTGCCCGAGACAAAGCAAAAGATGAGGCCAAAGTGAGCGGTAAAAAAGACAGCGgcaaggaggagaagagaaagcgcctcgaggaggagaagaagaagaaagaggaaaaggagcgaagaaagaaagaggaggaaaagcaGAAAGCGGAGGAggagcagaagaagaaagaggaggaggagaagagacagcaggaggaggaggagcggaAGCTTCAAGAGGAGGAAGTCAAAAGACAgcgggaggaggaggcagcTCTCCTCAAGGAAAAGGAGGAGGGGCATCAGCTGCACCAGGAGGCCTGGGAGCGCAATCAGTGCAGGAAGGAACTCCGCAGCAAGAACCAGAACGCCCAAGAGGGTCGGCCCGAAGAGGCCTTCTTCAGCCGACTGGACTCCAGCCTTAAAAAGAACACCGCCTTTGTCAAGAAGCTGCGTACACTCACCGAACAGCAACGAGACTCGCTCTCCAATGACTTTGCCTCACTGAACCTCAGCAAGTACATCGGCGAGGCCGTGAGCTCTGTCGTGGAGGCCAAGCTGAAAATCTCCGACGTCGGCTGCGCTGTCCATCTCTGCTCCCTCTTCCACCAGCGGTACGCTGAGTTCGCTCCGTTGCTGCTCCAGGCGTGGAAGAAGCACTTTGAAGCGAGGAAGGAGGACAAGGCGCCCAACGTGAGCAAGCTGCGCACAGACCTGCGCTTCATCGCCGAGCTCACCATCGTCGGCCTCTTCACCGACAAAGAAGGGCTTTCGCTGATTTACGAGCAGCTGAAGAACATTATCGGGACCGACCGGGAGACGCACACTCATGTGTCTGTGGTAATCAGCTTCTGTAAGCACTGTGGGGACGACATCGCTGGCCTTTTGCCCCGCAAGGTGAAACTAGCTGCCGAGAAGTTCGGTTTGGGCTTCCCTCCGAGCGAGATAATCAGCACGGAGAAACAGCAGCCCTTCCAGAACCTGCTACGGGAGTACTTCACATCACTCACCAAACACCTGAAGAAGGACCACCGGGAGCTGCAGAACACTGAGAGGCAGAACAGGCGTATCCTACATTCCAAAGGGGAGCTGAGTGAGGATAGACACAAGCAGTATGAAGAGTTTGCCACTTCCTACCAGAAGCTGCTGGCGAACACTCAGTCCCTGGCTGATCTGCTGGATGAAAACATGCCCGAGCTGCCCGTGGACAAGACTGTGCAGGAGGAGCACGGCCCCGGCATTGACATTTTCACCCCTGGAAAGCCCGGAGAGTATGACCTGGAGGGAGGGATCTGGGAAGATGAAGACGCTCGTAACTTCTACGAGAACTTGGTGGACCTGAAGGCCTTCGTCCCTGCCATCCTCTTCAAGGACAACGAGAAGAGCAGCCAAGGCAAAGACAAGGACGAAGCCAAAGATGGCAAAGAGGGGAAAGACGCGGCCAGCACCACAGAGGAActggagctggagctggaggCTCTGGACATCGCAGATGAACCTATGGAACTGGAGGGACCAGACGAGGCAGAGAATGAAGAACTGGCCAAAAAACTGCTGGATGAGCAAGAACAAGAGGATGAAGAGGCCAACACAGGGTCCCATTTGAAGCTAATCGTGGACGCCTTCATCCAACAGCTCCCCAACTGTGTCAACAGAGACCTCATAGACAAGGCTGCCATGGACTTCTGCATGAACATGAACACCAAGTCCAACAGGAGGAAGCTCGTCCGAGCCCTCTTCACTGTCCCCAGGCAGAGGTTGGATCTTCTGCCCTTCTACTCTCGCCTGGTGGCAACCCTTCATCCCTGCATGTCAGACGTGGCTGAGGACCTTTGCTCCATGCTGAAGGGAGACTTCAGGTTTCACATGCGGAAGAAGGACCAAATCAACAttgagacaaaaaacaaaacggtCAGATTTATCGGGGAACTGGCCAAGTTCAAAATGTACTCAAAAACGGACACGCTTCATTGTCTCAAGATGCTGCTGTCTGATTTCACTCATCACCATATAGAGATGGCCTGCACACTGCTGGAGACCTGCGGCCGCTTCCTCTTCAGATCCCCCGAATCTCACCTGCGTACCAGCGTCTTGCTGGAGCAAATGATGCGCAAAAAGCAGGCCCAGCATCTGGACGCCCGCTATGTCACGATGGTGGAGAACGCCTACTACTACTGCAACCCCCCACCCATGGAGAAGACGGTGAAGAAGAAGAGGCCCCCGCTGCAGGAGTACATCCGCAAGCTGCTCTACAAGGACCTGTCCAAGGTCACCACGGAGAAGGTGCTGAGGCAGATGCGCAAGCTGCCCTGGCACGACCCCGAGGTCAAGAGCTACCTGATCTGCTGCATGGTCAACATCTGGAACGTCAAGTACAACAGCATCCACTGTGTGGCCAACCTGCTGGCCGGCCTGGTGGCCTACCAGGAGGACGTGGGCATCCATGTGGTGGACGGAGTGCTGGAGGACATCCGGCTGGGCATGGAGGTCAACCAGCCCAAGTTCAACCAGCGGCGGATCAGCAGCGCCAAGTTCCTGGGCGAGCTCTACAACTACCGCATGGTGGAGTCGGCCGTCATTTTCCGCACCCTCTTCTCCTTCATCTCCTTTGGGATCAATCAGGACGGCAGCCCCAGCGCGCTGGACCCTCCGGAGCACCTGTTCCGCATCCGCTTGGTCTGCACTTTGCTGGATACCTGCGGCCAGTACTTTGACCGAGGCTCCAGCAAGAGGAAGCTGGACTGTTTCCTCATCTACTTCCAGCGGTACATCTGGTGGAAAAAGAGCATTGATGTTTGGACCAAGGACCACCCGTTCCCCATCGACATTGACTACATGATCAGCGACACCCTAGAGCTGCTCAGGCCCAAGATGAGGCTCAGCTGCTCCTTGGAGGAAGCCACCAAACAGGTCACCGACCTGGAGAGGGAGGTGCTCTACAAACTAGGTCTTGCCATGGAGAAGGACGGTCGCTCCAGTGCCATGAGCGAAGGCGAGGTTCTCGACGAGGAAGACGACGATGGCGATGACGACGAAGAGGGAGGTGCAGAGACTGAGGAGCAGTCGGGCAACGAGAGTGAAATGAACGAACAGGAAGAGGATGAAGGGTCAGAGAAcgaagaagaggagagggaggaagaggaagaagagaacaCCGACTACCTGACCGACtccaataaagaaaatgagaCGGATGAGGAGAACAATGAGGTGACCATCCGCGGCGGTGGACTGAAGCATGTGGCCTGCGCCGAGGACGAGGACTTCATTCAGGCTCTGGATAAGATGATGCTGGAGAACCTGCAGCGCAGCGGCGAGACGGTGAAGGTGCACCAGCTGGACGTGGCCATTCCACTGCAGCTGAAGAGTCAGCTGAAGAAGGGGGGCTCCAGAGAGCAGTGCATCGGGGAGGCGGACTCGGACATCTCCGACACCATGCAGTTCGTCATGCTGACACGCAAGGGCAACAAGCAGCAGTATAAGATCCTGAACGTGCCTCTGTCATCCCACCTGGCGGCGAACCACTTCAACCAGCAGCAAGCCGAACAGGAGGAGCGCATGAGGATGAAGAAACTCACCCTGGACATCAATGAGAGACAGGAGCAGGAGGACTACCAGGagaTGATGCAGTCCCTCGCACAGCGTCCGGCTCCGGCCAACACCAACCGGGAGCGCCGGCCTCGCTACCAGCACCCGAAAGGCGCTCCCAACGCCGACCTCATCTTCAAGACCGGAGGAAGGAGACGCTGATTGGAGTCTGGGTCCGGGCTGAACGAGCGAGCAAGCAAGAGAGCGAATGAACaagcgagagagaaagagggggagagaaaaagaagatcGGAAGGGATAACCCGGTCTAAACAGGGGAACGAGTCCTCCAGACGCCCACCCTGAAGCCGGGACAGACCAAAACCCCTGACCTGAACGCACCCTTCTTACCCTGCCGAGGGGGCCCGAAGCccgaggaggagagacagaaccGGGAGGgggggaggtcagaggtcaggggtCAGACAGTTGGCTCTCTTTGCgt
>XM_039791695.1
CAGTTAGGCAAAATTTGTGGAACAACCGTGAGAGGGTCCTTCTGTTGTTCACACGGAAACCAACCCCAATGACCGATGTTTGTTATGCTACATTAGCAGTATGCCTGCTGAACGCAAGCGCTCCGTAAACATGGACGAGAAAGACGTTTGCACCTTCAGTAACAAGGAAAAAGAGAAGGACAGAGATGGCGAGAGAAGACCAGCGTCTGCCCGAGACAAAGCAAAAGATGAGGCCAAAGTGAGCGGTAAAAAAGACAGCGgcaaggaggagaagagaaagcgcctcgaggaggagaagaagaagaaagaggaaaaggagcgaagaaagaaagaggaggaaaagcaGAAAGCGGAGGAggagcagaagaagaaagaggaggaggagaagagacagcaggaggaggaggagcggaAGCTTCAAGAGGAGGAAGTCAAAAGACAgcgggaggaggaggcagcTCTCCTCAAGGAAAAGGAGGAGGGGCATCAGCTGCACCAGGAGGCCTGGGAGCGCAATCAGTGCAGGAAGGAACTCCGCAGCAAGAACCAGAACGCCCAAGAGGGTCGGCCCGAAGAGGCCTTCTTCAGCCGACTGGACTCCAGCCTTAAAAAGAACACCGCCTTTGTCAAGAAGCTGCGTACACTCACCGAACAGCAACGAGACTCGCTCTCCAATGACTTTGCCTCACTGAACCTCAGCAAGTACATCGGCGAGGCCGTGAGCTCTGTCGTGGAGGCCAAGCTGAAAATCTCCGACGTCGGCTGCGCTGTCCATCTCTGCTCCCTCTTCCACCAGCGGTACGCTGAGTTCGCTCCGTTGCTGCTCCAGGCGTGGAAGAAGCACTTTGAAGCGAGGAAGGAGGACAAGGCGCCCAACGTGAGCAAGCTGCGCACAGACCTGCGCTTCATCGCCGAGCTCACCATCGTCGGCCTCTTCACCGACAAAGAAGGGCTTTCGCTGATTTACGAGCAGCTGAAGAACATTATCGGGACCGACCGGGAGACGCACACTCATGTGTCTGTGGTAATCAGCTTCTGTAAGCACTGTGGGGACGACATCGCTGGCCTTTTGCCCCGCAAGGTGAAACTAGCTGCCGAGAAGTTCGGTTTGGGCTTCCCTCCGAGCGAGATAATCAGCACGGAGAAACAGCAGCCCTTCCAGAACCTGCTACGGGAGTACTTCACATCACTCACCAAACACCTGAAGAAGGACCACCGGGAGCTGCAGAACACTGAGAGGCAGAACAGGCGTATCCTACATTCCAAAGGGGAGCTGAGTGAGGATAGACACAAGCAGTATGAAGAGTTTGCCACTTCCTACCAGAAGCTGCTGGCGAACACTCAGTCCCTGGCTGATCTGCTGGATGAAAACATGCCCGAGCTGCCCGTGGACAAGACTGTGCAGGAGGAGCACGGCCCCGGCATTGACATTTTCACCCCTGGAAAGCCCGGAGAGTATGACCTGGAGGGAGGGATCTGGGAAGATGAAGACGCTCGTAACTTCTACGAGAACTTGGTGGACCTGAAGGCCTTCGTCCCTGCCATCCTCTTCAAGGACAACGAGAAGAGCAGCCAAGGCAAAGACAAGGACGAAGCCAAAGATGGCAAAGAGGGGAAAGACGCGGCCAGCACCACAGAGGAActggagctggagctggaggCTCTGGACATCGCAGATGAACCTATGGAACTGGAGGGACCAGACGAGGCAGAGAATGAAGAACTGGCCAAAAAACTGCTGGATGAGCAAGAACAAGAGGATGAAGAGGCCAACACAGGGTCCCATTTGAAGCTAATCGTGGACGCCTTCATCCAACAGCTCCCCAACTGTGTCAACAGAGACCTCATAGACAAGGCTGCCATGGACTTCTGCATGAACATGAACACCAAGTCCAACAGGAGGAAGCTCGTCCGAGCCCTCTTCACTGTCCCCAGGCAGAGGTTGGATCTTCTGCCCTTCTACTCTCGCCTGGTGGCAACCCTTCATCCCTGCATGTCAGACGTGGCTGAGGACCTTTGCTCCATGCTGAAGGGAGACTTCAGGTTTCACATGCGGAAGAAGGACCAAATCAACAttgagacaaaaaacaaaacggtCAGATTTATCGGGGAACTGGCCAAGTTCAAAATGTACTCAAAAACGGACACGCTTCATTGTCTCAAGATGCTGCTGTCTGATTTCACTCATCACCATATAGAGATGGCCTGCACACTGCTGGAGACCTGCGGCCGCTTCCTCTTCAGATCCCCCGAATCTCACCTGCGTACCAGCGTCTTGCTGGAGCAAATGATGCGCAAAAAGCAGGCCCAGCATCTGGACGCCCGCTATGTCACGATGGTGGAGAACGCCTACTACTACTGCAACCCCCCACCCATGGAGAAGACGGTGAAGAAGAAGAGGCCCCCGCTGCAGGAGTACATCCGCAAGCTGCTCTACAAGGACCTGTCCAAGGTCACCACGGAGAAGGTGCTGAGGCAGATGCGCAAGCTGCCCTGGCACGACCCCGAGGTCAAGAGCTACCTGATCTGCTGCATGGTCAACATCTGGAACGTCAAGTACAACAGCATCCACTGTGTGGCCAACCTGCTGGCCGGCCTGGTGGCCTACCAGGAGGACGTGGGCATCCATGTGGTGGACGGAGTGCTGGAGGACATCCGGCTGGGCATGGAGGTCAACCAGCCCAAGTTCAACCAGCGGCGGATCAGCAGCGCCAAGTTCCTGGGCGAGCTCTACAACTACCGCATGGTGGAGTCGGCCGTCATTTTCCGCACCCTCTTCTCCTTCATCTCCTTTGGGATCAATCAGGACGGCAGCCCCAGCGCGCTGGACCCTCCGGAGCACCTGTTCCGCATCCGCTTGGTCTGCACTTTGCTGGATACCTGCGGCCAGTACTTTGACCGAGGCTCCAGCAAGAGGAAGCTGGACTGTTTCCTCATCTACTTCCAGCGGTACATCTGGTGGAAAAAGAGCATTGATGTTTGGACCAAGGACCACCCGTTCCCCATCGACATTGACTACATGATCAGCGACACCCTAGAGCTGCTCAGGCCCAAGATGAGGCTCAGCTGCTCCTTGGAGGAAGCCACCAAACAGGTCACCGACCTGGAGAGGGAGGTGCTCTACAAACTAGGTCTTGCCATGGAGAAGGACGGTCGCTCCAGTGCCATGAGCGAAGGCGAGGTTCTCGACGAGGAAGACGACGATGGCGATGACGACGAAGAGGGAGGTGCAGAGACTGAGGAGCAGTCGGGCAACGAGAGTGAAATGAACGAACAGGAAGAGGATGAAGGGTCAGAGAAcgaagaagaggagagggaggaagaggaagaagagaacaCCGACTACCTGACCGACtccaataaagaaaatgagaCGGATGAGGAGAACAATGAGGTGACCATCCGCGGCGGTGGACTGAAGCATGTGGCCTGCGCCGAGGACGAGGACTTCATTCAGGCTCTGGATAAGATGATGCTGGAGAACCTGCAGCAGCGCAGCGGCGAGACGGTGAAGGTGCACCAGCTGGACGTGGCCATTCCACTGCAGCTGAAGAGTCAGCTGAAGAAGGGGGGCTCCAGAGAGCAGTGCATCGGGGAGGCGGACTCGGACATCTCCGACACCATGCAGTTCGTCATGCTGACACGCAAGGGCAACAAGCAGCAGTATAAGATCCTGAACGTGCCTCTGTCATCCCACCTGGCGGCGAACCACTTCAACCAGCAGCAAGCCGAACAGGAGGAGCGCATGAGGATGAAGAAACTCACCCTGGACATCAATGAGAGACAGGAGCAGGAGGACTACCAGGagaTGATGCAGTCCCTCGCACAGCGTCCGGCTCCGGCCAACACCAACCGGGAGCGCCGGCCTCGCTACCAGCACCCGAAAGGCGCTCCCAACGCCGACCTCATCTTCAAGACCGGAGGAAGGTGAGACGCGATCACTGAAGCGCCGGCGCTCAAAACAAACGGCAGAATGTGTTGGATGACGATGTGAGGAATTAGGGCTCATTCTCTTACTGCAGTATGTACCGACTCTCCACCTCGTCGGCGTCTCTTTGAACAGAGTGAAAAGTGCAAGAATTAAAAGGCACGAGACGCGAGACAGACAAGAGAGGCGAGACAGGGCAGACGAGCAGGAGAGAGACCAAAGACATGTCACAGAGTAGGCTAGAGCTGCTCGAGCCCCCATCGAGGACTTTAATTAAACATCAGCAGAGGTGAAGCTTCAGCAAAGTTAGTCATAAAAACAGAGGGAAGGTTTCGACGAGGAGTTCCTGTTTCTATTTGCACTTTTAACTGATTCTGATTTTCAGGTGCTAAAGCGTTCAAGTGagatttttctttaaaagcTCTGGAAATATTTTGGAAATAAAGATGACTTGAAGTTTATACTTTGTTAACATCAACAGCACCTTGTTGTGTGTCTTTCTTGCTTCTGTAAAGTGGAACGACAACACAACATGAACATTTCCCAGGTTATGCTTTATGCATATCGTGGCAGGTGAATCCATATATTGCCACAAACGTGACACTTTTATTTTGGGAAGAGGTTTTTAAAATtggtattttctttttaaatattttaagatAATAAACCTAAAGGGAGAACAGAGGCAAGGAGAGTGGGTTCAGGGATGGAGCACAGGGTGTGATTTGTGATTTGGCTTCAGTAACAGTAATAAACTTTTATaacaagta

Function

symbol description
upf2 Predicted to enable RNA binding activity. Acts upstream of or within chordate embryonic development. Orthologous to human UPF2 (UPF2 regulator of nonsense mediated mRNA decay).

NR:

description
PREDICTED: regulator of nonsense transcripts 2

GO: NA

KEGG:

id description
K14327 UPF2, RENT2; regulator of nonsense transcripts 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791692.1 False 4220 mRNA 0.56 21 4495890 4522614
XM_039791693.1 False 4217 mRNA 0.56 21 4495890 4522614
XM_039791694.1 False 4217 mRNA 0.56 21 4495890 4522614
XM_039791695.1 True 4698 mRNA 0.53 20 4495890 4520354

Neighbor

gene id symbol gene type direction distance location
slc35e3 slc35e3 coding upstream 3003 4483461 ~ 4492887 (+)
LOC120553538 LOC100693972,LOC102796305,LOC102207118,LOC102289868,LOC101481412 coding upstream 47853 4200672 ~ 4448037 (+)
trnal-caa_19 NA coding upstream 299075 4196705 ~ 4196815 (+)
trnal-caa_18 NA coding upstream 301978 4193802 ~ 4193912 (+)
trnal-caa_17 NA coding upstream 305104 4190676 ~ 4190786 (+)
LOC120553579 rab3ip coding downstream 20559 4543173 ~ 4563272 (+)
kics2 clg23h12orf66,LOC103364500 coding downstream 68096 4590710 ~ 4594142 (+)
LOC120553359 v1ar1,LOC100695840,LOC101485029 coding downstream 166313 4688927 ~ 4696183 (+)
dmtf1 NA coding downstream 211648 4734262 ~ 4749242 (+)
LOC120553055 NA coding downstream 270673 4793287 ~ 4804242 (+)
G225847 NA non-coding upstream 5820 4489680 ~ 4490070 (+)
G225842 NA non-coding upstream 20763 4473611 ~ 4475127 (+)
G225802 NA non-coding upstream 42458 4450060 ~ 4453432 (+)
G225807 NA non-coding upstream 186502 4309107 ~ 4309388 (+)
G225805 NA non-coding upstream 224654 4270793 ~ 4271236 (+)
G225891 NA non-coding downstream 130353 4652967 ~ 4653360 (+)
G225892 NA non-coding downstream 133881 4656495 ~ 4656819 (+)
G225895 NA non-coding downstream 135570 4658184 ~ 4658631 (+)
G225901 NA non-coding downstream 186249 4708863 ~ 4709269 (+)
G225935 NA non-coding downstream 214721 4737335 ~ 4738306 (+)
LOC120553793 NA other upstream 556936 3935674 ~ 3938954 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other upstream 654716 3814481 ~ 3841174 (+)
trnat-ugu_40 NA other upstream 961218 3534600 ~ 3534672 (+)
trnat-ugu_39 NA other upstream 962229 3533589 ~ 3533661 (+)
trnat-ugu_38 NA other upstream 963810 3532008 ~ 3532080 (+)
G225894 NA other downstream 134830 4657444 ~ 4657969 (+)
abcc9 abcc9,LOC107387088 other downstream 758644 5281258 ~ 5373637 (+)
prkcq prkcq,LOC102789446 other downstream 2137906 6660520 ~ 6686639 (+)
snrpf snrpf,LOC106576293 other downstream 2795903 7318517 ~ 7321189 (+)
amdhd1 amdhd1 other downstream 2800456 7323070 ~ 7332259 (+)

Expression


Co-expression Network