LOC120553380


Basic Information

Item Value
gene id LOC120553380
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 18901550 ~ 18911762 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791726.1
CCAATGCTGTGCTGGTAAACACCTCTTGCTGTGGTGATCAGATTTGTGTTGAGAAGACGTGCAGTTATCATGGAAAAACATACAAGgTTGGAGACAGATGGACGGATGCTGCCCATCCCTGCATGTCATATAACTGCAGCATAGAGGGTATTCAGACTGAGACTAGAGTCTGTCCCACAGTAGAGTGTCAGGAGGAGGACAGATTTTGGGATGATCAACACTGCTGCTTTACATGTAACCAGAGGTGTGCTCCGAAGGTGACCAGTATCAGTGTTACTGTAGACAACTGTACCACCGTCATGCAGATACCTGTGTGTCAGGGCCAATGTGTGTCTCAGCACAGGTGGAGCAGAAGGGCAGATGCTGTCAGGAGTTGAGCTCAGACAGGAGAACAGTGACTCTGCAGTGCTTTGACCTCAAGATCAGACACTACACCTACAAGCACATCACCAGCTGGGAGTGCCGAGCCTGCAGCATACTGCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791726.1 True 484 mRNA 0.50 6 18901550 18911762

Neighbor

gene id symbol gene type direction distance location
LOC120553745 NA coding upstream 208 18900615 ~ 18901342 (+)
LOC120553744 LOC103369285 coding upstream 12194 18862872 ~ 18889356 (+)
LOC120553631 NA coding upstream 163180 18731704 ~ 18738370 (+)
alg10 alg10,LOC108244056 coding upstream 362123 18535729 ~ 18539427 (+)
cerk cerk,LOC103356477 coding upstream 587844 18274421 ~ 18313706 (+)
LOC120553378 LOC103374463,LOC104964816 coding downstream 3203 18914965 ~ 18927966 (+)
LOC120553377 LOC105936313,LOC107099288,LOC103155794 coding downstream 18508 18930270 ~ 18941975 (+)
LOC120553379 iapp,LOC103371156 coding downstream 34396 18946158 ~ 18948515 (+)
pyroxd1 NA coding downstream 39521 18951283 ~ 18959848 (+)
etnk1 etnk1,LOC104964819 coding downstream 49323 18961085 ~ 18974640 (+)
LOC120553383 NA non-coding upstream 4023 18892174 ~ 18897527 (+)
G228622 NA non-coding upstream 162066 18738484 ~ 18739484 (+)
G228611 LOC102192848,LOC101469293 non-coding upstream 223985 18676351 ~ 18677565 (+)
G228605 NA non-coding upstream 237578 18604993 ~ 18663972 (+)
G228593 NA non-coding upstream 367201 18533301 ~ 18534349 (+)
G228787 NA non-coding downstream 508610 19420372 ~ 19420829 (+)
LOC120553618 NA non-coding downstream 612313 19524075 ~ 19559043 (+)
LOC120553213 NA non-coding downstream 804500 19716262 ~ 19717346 (+)
G228905 NA non-coding downstream 897913 19809675 ~ 19810580 (+)
LOC120553215 NA non-coding downstream 922245 19834007 ~ 19841662 (+)
LOC120553630 muc19 other upstream 46236 18822832 ~ 18855314 (+)
srr srr,LOC105936311,LOC103459528 other upstream 368436 18530136 ~ 18533114 (+)
G228335 ahcyl2,LOC103371314,LOC107725924,LOC107656398 other upstream 1978727 16919663 ~ 16922823 (+)
morn2 morn2 other upstream 1984622 16880276 ~ 16916928 (+)
stmp1 NA other upstream 2033754 16866310 ~ 16867796 (+)
LOC120553164 NA other downstream 441221 19352983 ~ 19355551 (+)
G228784 LOC103359233,LOC104943309,LOC100709697 other downstream 498728 19410490 ~ 19413704 (+)
LOC120553210 LOC104943308 other downstream 720175 19631937 ~ 19839382 (+)
LOC120553104 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC103459764,LOC106945279 other downstream 941166 19852928 ~ 19905952 (+)
G228924 NA other downstream 1070486 19982248 ~ 19985648 (+)

Expression


Co-expression Network