LOC120553384 (stk38l)


Basic Information

Item Value
gene id LOC120553384
gene name stk38l
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 21269874 ~ 21293236 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791727.1
cGTCAATCAAACGCTAACGCCGTAGCGTGCCCGGAGCGTTTGATGAGACCGATGGTCCCAGGAAGCAGCGCtgcttattttatgttttatagcGATAAAGACGGGGGAAAGCGTTGCATTTCGAGGTCAGGGGGTACAAATGAAGAAAGTGAAATAATGTCAAATAATTTCAGGTTAGCTTGTTGTCAACGTCAGAGcgcttttgttatgatttggcGTTGATATCGGCGATGTTTACCGTGCAGCCCGTTAAGTTCCTCTGAAGGGTGGCACAGTAACGTTAAGTGGAGCCTTTAGCCTTCGACTGCCTAAATATTAGGCAGAAAAATACGAAAATTCACATTATTTCTCATATATCGTGTGGTGGCGCCAAGCCAGTAATTGACTCTGGAGCAGGACACGGAGGATAGTATGGCCATGACGGTGGAGACTGCAGCTGCACTTCCCATGAGCAATCACACCCGAGAGAGGGTGACTGTGGCCAAGCTGACACTGGAGAACTTCTACAGCACTCTACTCACCCAGCACGAGGAGCGGGAGATGAGGCAGAAGAAGCTGGAGAAGGCCATGGACGAAGAGGGCTTGCCAGATGAGGAGAAAGTAATGCGCCGCTCGCAGCATGCCCGTAAGGAGACTGAGTTTCTTCGACTGAAGAGGACGCGACTTGGCTTGGATGACTTTGAGTCCCTTAAAGTTATCGGACGGGGTGCTTTTGGAGAGGTCCGCTTGGTGCAGAAAAAAGACACGGGGCACATTTACGCCATGAAGATTTTGAGAAAAGCGGACATGCTGGAGAAAGAACAGGTGGCTCATATCCGGGCGGAGAGGGATATTCTGGTGGAGGCGGACGGCGCCTGGGTGGTCAAGATGTTCTACAGCTTCCAGGACAAGAGGAACCTCTACCTCATCATGGAGTTCCTTCCTGGAGGCGACATGATGACCCTGCTGATGAAGAAAGACACTCTGTCTGAGGAGGCCACCCAGTTCTACATCGCAGAGACAGTTCTGGCCATCGACTCCATCCACCAGCTGGGCTTCATCCACAGAGACATTAAACCAGACAACCTGCTGCTGGACTCCAGGGGACATGTGAAGCTGTCCGATTTTGGCCTGTGTACGGGACTGAAGAAGGCTCATCGCACAGAGTTTTACAGGAACCTGACGCACAACCCGCCCAGTGATTTCTCCTTTCAAAATATGAACTCCAAGAGGAAAGCAGAAACCTGGAAGAAGAACCGGAGGCAGCTGGCTTATTCTACTGTTGGAACGCCAGACTACATTGCTCCGGAAGTCTTCATGCAGACGGGATACAACAAGCTGTGTGACTGGTGGTCTCTGGGTGTCATCATGTATGAAATGCTCATCGGTTACCCACCCTTCTGCTCTGAGACGCCGCAGGAGACATACAGGAAGGTGATGAACTGGAAGGAAACCCTCGTCTTCCCCCCTGAAGTCCCCATCTCAGAGAGGGCTAAAGACTTAATATTAAAGTATTGCACCGACGCTGAGAACAGGGTTGGAGCTGTGAGTGTGGACGAGATCAAGAATCACCAGTTTTTTGAGTCTGTGGACTGGGAGCACATCAGGGAGCGGCCAGCAGCCATCTCCATTGAAATCAAGAGTATCGACGACACCTCAAACTTTGACGACTTCCCCGAATCCGACATCCTTCAGCCAGCCAATGCAACGGAGCCAGATTTCAAATCGAAGGATTGGGTGTTCCTCAACTACACGTACAAACGCTTTGAGGGTCTGACTCAGCGAGGCACCATCCCCACATACATGAAGGCAGGGAAGGCCTGACACGGGGAGACAGGGTtgcggaggaaaaaaaacagacgtTTACGGACACAGGGTCGGGCCGTGGAGCCCCGCTGGCGCTGAAGGCTGCGCTGTCAGCCTCTCAGTATAAATTTAACCCTCATCACAAGTTATTTAGGTCTGCTCAGCCGCCGCAAGAACGCCAAGTGCTTGGAAAATTAAGGAGCGTTACCGCATTACCTCGGTTGTTCGTATCGTATACACGTGACGTCTTTAGCCATAGCTCTCAGGCCAGCTCACTAACTAGGGCACTAAATCAGCATACCTGCATGTTCAACAGCATATTGCTTCTGGAGAGGACTTTCTACTGCCCAAAGGCAACTGTTGGAATGAGGATTAAGTACAAATCCCTGCTTGAACATCTTCACAGCGATAGTTTCTACAGCACCCTTGTGGCTAAATTAGCTCTGATGCAAACATCATTTCAAATACTGAAGACAAGCTCTATACACTGTAGTCAGAAAGATTAGTGAGTAAGAACAGGTATCGCTCACTTGTTCTCGCCCATACTGTTATACTCTGTGGATTTTGAAGGAAAGTTCCAGCATGATTTTTAGGGTTTTGGCTCACTTTTGGCTTTGTATTCAAGAGTTGCTCCCACTAACAAAGATAGCATCCATTTAAAAGCGCAACGTGTGAAAATCtttcatttcaatttctttCTAGCAGTGAGAAGCATCTTGTTATGGCAGTAGAGCCCGGTGAAACCTCAGCATCAGCTTTTCTTTATGTGAAAAGAGACAACTGCTGGGGATTGTGGTGGTGCTAGTTAGCACAATGCTAGCGGATCCCAATGGAAGCTCAATTGGCATCACATTTGTAGAGAAAAAGTTGAGAAAGTGAAGGGTGACAGCATTGTATTGCTATGCCTTAGGTTTAAAGACTAGGCTTGTAGACCAAtgtttagccatgctagcggtgAAGCTATTAATATTGGATGGATCGCCATGGCGTTTGGTACCCGCATTCATGTACCCGCCAAGATGaaatgtaataactttggtgatcctctagcaccaccagcGGGTCATaatgtccaatactttggtttgtgACCAAATAtatgcaagccatgatgtctttctctctctcatgggtgggcc

Function

symbol description
stk38l Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Is expressed in several structures, including adaxial cell; intestinal bulb primordium; liver and biliary system; olfactory system; and yolk syncytial layer. Orthologous to human STK38L (serine/threonine kinase 38 like).

NR:

description
serine/threonine-protein kinase 38-like isoform X1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08790 STK38, NDR; serine/threonine kinase 38

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791727.1 True 2924 mRNA 0.49 14 21269874 21293236

Neighbor

gene id symbol gene type direction distance location
LOC120553569 arntl2,LOC100698791,LOC102799561,LOC102199297,LOC101476868,LOC102299859 coding downstream 8172 21234254 ~ 21261702 (-)
slc13a4 slc13a4 coding downstream 86018 21153201 ~ 21183856 (-)
pik3cg pik3cg coding downstream 223488 21022335 ~ 21046386 (-)
ano2b ano2,LOC103459666,LOC108245555,LOC102202227 coding downstream 261639 20925173 ~ 21008235 (-)
il15ra NA coding downstream 629152 20620545 ~ 20640722 (-)
med21 med21,LOC102798687 coding upstream 2277 21295513 ~ 21301256 (-)
gas2l3 gas2l3 coding upstream 42301 21335537 ~ 21365108 (-)
slc38a4 slc38a4 coding upstream 225389 21518625 ~ 21571113 (-)
LOC120553490 ano4,LOC102780176 coding upstream 390974 21684210 ~ 21753271 (-)
LOC120553085 LOC103357120 coding upstream 522946 21816182 ~ 21827934 (-)
G229296 NA non-coding downstream 5062 21264501 ~ 21264812 (-)
G229248 NA non-coding downstream 70615 21198468 ~ 21199259 (-)
G229235 NA non-coding downstream 207438 21019259 ~ 21062436 (-)
G229172 NA non-coding downstream 402345 20867300 ~ 20867529 (-)
G229168 NA non-coding downstream 489966 20779683 ~ 20779908 (-)
G229351 scaf11,LOC102797309 non-coding upstream 157227 21450463 ~ 21453152 (-)
G229390 NA non-coding upstream 349279 21642515 ~ 21642768 (-)
G229392 NA non-coding upstream 362666 21655902 ~ 21656162 (-)
G229413 NA non-coding upstream 388324 21681560 ~ 21682539 (-)
LOC120553093 NA non-coding upstream 483797 21777033 ~ 21777676 (-)
ptprz1b NA other downstream 124341 21063691 ~ 21145533 (-)
G229199 NA other downstream 311654 20957657 ~ 20958220 (-)
cdk17 LOC104930593 other downstream 915247 20301092 ~ 20354627 (-)
rerg rerg other downstream 1147481 20066895 ~ 20122393 (-)
etv6 etv6 other downstream 1430524 19806814 ~ 19839350 (-)
slc38a2 slc38a2 other upstream 167840 21461076 ~ 21474602 (-)
LOC120553090 NA other upstream 477852 21771088 ~ 21811097 (-)
G229716 NA other upstream 1811524 23104760 ~ 23239573 (-)
glipr1a NA other upstream 1910532 23203768 ~ 23210497 (-)
LOC120553170 NA other upstream 2397283 23690519 ~ 23711804 (-)

Expression


Co-expression Network