LOC120553386


Basic Information

Item Value
gene id LOC120553386
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 24773501 ~ 24788753 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791730.1
ATCAGCTGTATAAACAACGTGATAGAACATTATTCGTGGGACTGTCCTAACATCGGTTAGACGCAGATACAATATCTGACAGCTCTGAAACGCCACAGAAGAAATTGAAGATGGACCATAAGGTGTTTAATGATCCCATCCACGGGACGGtggagttacacccacttctcATCAAAATCATCAACACACCTCAGTTCCAGAGACTGAGAAACATCAAGCAGCTTGGAGGGGTCTACTTTGTTTACCCTGGAGCATCCCACAACCGCTTTGAGCACTCCATTGGGGTGGCGCACTTGGCAGGTCAACTTGTTGAGGCTCTGCGTACAAGACAGCCGGAACTCGACATCGATGACAGAGACGTCCTTTGTGTGAAGATTGCTGGTCTCTGCCATGACCTGGGACATggacccttttcccatctgtaTGATAAAATGTTCATACCCAAAGTACCATATCCACCAGGTCCACTAGGTGATAAAATGGCAAAGTGGAAGCATGAAGAAGCCTCTGTAGAGATGTTTGACCATCTGGTGAAATCTAATAATCTGGAGCTGGAGATGAAGGACCATGGTCTGAATCTGCCCGAGGACTTGGATTTCATCAAAAAGTTGATTGAAGGACTGAGTGACCCTAATGCAGTCCAGTGGCCATATAATTGTCGGCCAAAGGAAAAATCCTTCCTCTATGAAATCGTGGCCAACAAAAGCAACGGCATTGATGTGGACAAGTTTGACTACTTTGCCAGGGACTGCTACCACCTGGGCATGAAGAACAACGTTGACCATCTCCGCTTCATGCAGTTAACCAGAGTGTGTGAGGTGGACGGGCTGAATCACATCTGCAGTAGAGACAAGGAGGTGGGCAATCTGTATGACATGTTCTACACCAGGAACTGTCTCCACAGAAGAGCCTACCAGCACAGAGTGAACAAGATCATAGAGTATATGATTGCAGAGGCCTTTTTAGAAGCAGACGGGCATATCAAGATTGAAGGCTCAAAAAGGCAGATGTTCACTCTCTCTACAGCCATAGATGACATGGAGGCCTACACCAAGCTGACAGATCATGTGTTTGAACAAATACTCCACTCTTCCTCCACGGATCTGGCTGACGCAAAGAAGATTCTGGAAAAGATCATCTCTCGAAAACACTACAAGTTTCTGGGTGAAATCAGGCCTGGACCAATCCCAACCAAGAAGGTGATTGGTGAATTGGAAAAGGAATTGGCTGCCTTGGACTTCATAGTTTTAGTCACTACTTTTGACTATGGAATGAAAGACAAGGACCCCATCAAGAATGTGTATTTCTACAGCAAGAGAAACCCTGACACAGCATTTAAGATCACCAAAGACCAGGTGTCCAAGCTTCTCCCAGAATGCTTTTCTGAGCAGCTGATCGGGGTTTACAGTAAGAAGACTGATGACCAGAGTCTGAAGGCTGCCAGGAATCACTTGGACCAGTGGTGTGAAGATAAGGGCTTGCCAAACCTTCAGTATGGAGACACTGCAACACCATAAATCATCCCTGGGGGAAATATCCAGAACAATCCACCAGATGTTTCAGAAAATAGAgattaaaagtgaaaaaagaaatcaaacacTCCCTGCTACTTATAGGTTCATTATGATTGATTCTATAAGGTGAGTATGATCACAGTGTAGTACTAGACACCACTTTTCTCCAAAAACAAATGATTTCAGAGTACCAGGATACATTACCGCATGTTTGGGTCATATACTCAGTTTCTTTAGAGCCCTGTTCAACATTGAACACATATCTATGTTTTAGTTTGATCATTAAACACACTTTAAATGTCTTGGTCTAAACTGAAGCATATTTTAGATAATTGTTTTTTATCCATCACATTTAGGCTTCTCTGTGTATTCTGTGTGTATTCCTTATAATCAGGGCACGCTATAAAGCATTACCCACATGGAGTGGACTTAAAGTGAATATTTAAATTGTGGCTTAGggattttaaatattattaagGTGTTTGGTTTTTATGTTAATCTGTGTGAATTGATGTGATAATCTGATTATATATTATGGGAAGCTCTGACTTGGGAATCACTTTGTATTGCATCTATCAAATGAAATAAGAGTTATGATTACTATAACCATTATGATAACAGTATACTCTAGCCCagtggtgtcaaactcattttagttcatGGGCCACATCCCCCTAATCTGATCTCAAGTGGGCCGGACCATTAAACCActccagaaagatcagaaactgtatctgccacagagttacttgtcagcttgatgttggcaaacgcaAGTCGCTTCTTCTACGACGGTGTTTTAAGGCCGttgtaggaaaaaaataatgttacagacccgggagagaggggtaatattccgaaaaaaaagataaagtcGTACATTTTCGGGAAAAAGAACTCTGATAttttctgagattaaagtggtaaatttGTTATTCGTTTCTTCTctgcaattttcacactttgcaagttcatccagtgggcctgattggaccctttggcGAGCCGGTTCTGGCCCACGGGCcgtatgtttgacacccctgctctagCCTATATCACTGTTTCTCACTGTACTCGTACTATATAGCTCAACTTGCTTTGTTCAATGTAACCATTAGAGTGTGATTAAGATAAACTTTCAATATCGTTGTGTTTTGCTCATAGAGTGAAACTGTATTagattattaatatatatttgggGATGTAAAGGGAAAcctatctaatctaatctattaGAACCTTTCAACTGTATCCCTGATGAGACAGGTTGATGTTTGTCCTTGTGTGGTTTAACTTTTCCAACAGATGAAATCATAACACTTGTGTTTTCAGCTGGGATGATAATTCATCTTTTATTCATGGAACATGTTGTCAAAGAAAAAattgggaatttttttttttaaatgtgtattagCAAAGAAAGGCCTTAAAATGATAAAAGGAAAAGCAATCAATCCTGAATGGAAAGAGAAATAAAGGGAAGTGTCTCAGTGC

Function

GO:

id name namespace
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791730.1 True 3008 mRNA 0.41 14 24773501 24788753

Neighbor

gene id symbol gene type direction distance location
LOC120553387 NA coding upstream 23673 24732196 ~ 24749828 (+)
LOC120553385 NA coding upstream 138236 24620865 ~ 24635265 (+)
LOC120553040 NA coding upstream 168554 24597350 ~ 24604947 (+)
nopchap1 LOC104942935 coding upstream 202180 24566241 ~ 24571321 (+)
chst11 chst11 coding upstream 294738 24384898 ~ 24478763 (+)
LOC120553142 NA coding downstream 41445 24830198 ~ 24835745 (+)
scube1 scube1 coding downstream 81194 24869947 ~ 24992165 (+)
mpped1 mpped1,LOC103131679,LOC106525904 coding downstream 222481 25011234 ~ 25113193 (+)
pnpla3 LOC103361965,LOC104964946 coding downstream 429787 25218540 ~ 25241938 (+)
LOC120553672 LOC103361951,LOC100711848,LOC101487241 coding downstream 455784 25244537 ~ 25260350 (+)
G230109 NA non-coding upstream 287984 24482310 ~ 24485517 (+)
G230011 NA non-coding upstream 509436 24260059 ~ 24264065 (+)
G229994 NA non-coding upstream 657380 24112965 ~ 24116121 (+)
LOC120553514 NA non-coding upstream 678336 24088025 ~ 24095165 (+)
G229976 net1 non-coding upstream 706512 24065214 ~ 24066989 (+)
G230192 NA non-coding downstream 7200 24795953 ~ 24798741 (+)
G230249 NA non-coding downstream 396059 25184812 ~ 25191943 (+)
G230260 NA non-coding downstream 563124 25351877 ~ 25352174 (+)
G230259 NA non-coding downstream 587594 25376347 ~ 25377601 (+)
G230327 NA non-coding downstream 647398 25436151 ~ 25494355 (+)
LOC120553083 NA other upstream 458794 24309542 ~ 24314707 (+)
LOC120553686 LOC105929833,LOC107382334 other upstream 827861 23934300 ~ 23945640 (+)
adm2a NA other upstream 924877 23833018 ~ 23848624 (+)
kcnc2 kcnc2,LOC100689973,LOC101475944 other upstream 1332838 23315421 ~ 23440663 (+)
phlda1 phlda1 other upstream 2030322 22739717 ~ 22743179 (+)
LOC120553523 NA other downstream 574129 25362882 ~ 25373996 (+)
msrb3 msrb3 other downstream 853087 25641840 ~ 25662819 (+)
LOC120553706 NA other downstream 1021654 25810407 ~ 25812828 (+)
arhgef39 arhgef39 other downstream 1249435 26038188 ~ 26106823 (+)
mrps33 mrps33,LOC106591474 other downstream 1583961 26372714 ~ 26381109 (+)

Expression


Co-expression Network