tnnt2e


Basic Information

Item Value
gene id tnnt2e
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 16833664 ~ 16854874 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791735.1
GTCATAGACAAGACATGTGGGCACATGATGGGCAGGGCCGAATCAAGTGTGCTTTTTGGTTGGGGATTATACAGGAGGTAAGATCAGAGCATGACCTCTGGGTGCATGGCAGCAAACAGGCAGGTAATTGGAATCCGAGATGTCtcaagaagaagaagttgtCGAGGAGATGTTATATGGATGTCAAAGTTGAGGTTGAAGTGGAAAAACCTGCACCTCAAGTAGAAGAACCTCCTACGGCAGAAGAGCCTGCAGAAGAAGATGACTCCAAACCCAAACCAAAGGCATTTGTTCCGGTTATAGCTGTGCCGAAGATACCCGATGGGGACAAAGTCGACTTTGATGACATCCACAGGAAGCGTCAGGAGAAGGATCTGACCGAGCTGACGTCTCTGATCGAGGCCCACTTCATTCAGAGGAAGAAGGACGAGGAGGAGCTCATTGCTCTCGTTAACAGGATCgAGAAGCGTCGCACTGAGAGGGCTGAACAGCAGAGGATCCGTTCTgagcaggagaaggagaggcagGCTCGTGTTGTTgaagaaaaggagaggaaggagctggaggaggcaCGTAAGAAGCAGGATGATGATGCCAAGAAGAAGAAGGCTCTGACAAACATCACTCAGCAGTATGGTGGTGTCCAACAGAGGCAAGAAGGAAAGAAGGGAGCCAAGAagcagacggagagagagaagaaaaagaagatccTGGCTGACAGAAGGAAGCCTCTCAACATCGACCATCTCACTGAGGACAAAGTGAAGGAGAAGTCCAATGAGTTGTGGCAGTGGCTGATGACGCTGGAGGCTGAGAAGTTTGACCTCACCGAGAAACTGAAGAGACAGAAATATGAGTGTGTTGAAGGGCCTAAAACCGATCCTCGGACATTGCAGCAGGAACAAAGCTGGGCGACTACAACGCAGAAGACCAATCAGCTCCTGGCTTGCATTCAGAACCAGGAAAGTGCCAAAGGAAGAGGCAAGGCCAAGGGCAGGGTGAGATAAATGTAAACATCAGCAAGAGTTCTCCTAGGAAGCATCTGAAAATGAGCAGCAGTATTTACTTCCGTGACATTGTGTGcttaaacaataataaaa

Function

NR:

description
PREDICTED: troponin T, cardiac muscle-like isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791735.1 True 1100 mRNA 0.49 16 16833664 16854874

Neighbor

gene id symbol gene type direction distance location
dock4b NA coding upstream 359991 16358792 ~ 16473673 (+)
gpr85 gpr85,LOC106576049 coding upstream 613079 16216041 ~ 16220585 (+)
LOC120553010 NA coding upstream 619787 16213082 ~ 16213877 (+)
ppp1r3aa NA coding upstream 657503 16163395 ~ 16176161 (+)
tfec tfec coding upstream 980820 15824344 ~ 15852844 (+)
LOC120553739 ascl4,LOC103372058 coding downstream 125132 16980006 ~ 16980757 (+)
cdkn1d NA coding downstream 146071 17000945 ~ 17005314 (+)
LOC120553296 LOC103372063 coding downstream 167018 17021892 ~ 17032722 (+)
wnt7ba wnt7b,LOC106575957 coding downstream 333312 17188186 ~ 17196857 (+)
LOC120553078 LOC104966316,LOC103366982,LOC104933494 coding downstream 379138 17234012 ~ 17237437 (+)
G228272 NA non-coding upstream 1543 16831604 ~ 16832121 (+)
LOC120553146 NA non-coding upstream 72503 16477197 ~ 16761161 (+)
G228276 NA non-coding upstream 220959 16612502 ~ 16612705 (+)
G228275 NA non-coding upstream 267526 16565665 ~ 16566138 (+)
G228246 NA non-coding upstream 509107 16322118 ~ 16324557 (+)
G228328 strip2 non-coding downstream 27964 16882838 ~ 16887563 (+)
G228326 LOC106583082,LOC106565661 non-coding downstream 62126 16917000 ~ 16919571 (+)
G228353 NA non-coding downstream 152928 17007802 ~ 17010730 (+)
G228354 NA non-coding downstream 158807 17013681 ~ 17014664 (+)
G228355 NA non-coding downstream 160204 17015078 ~ 17015306 (+)
cald1a LOC102212027,LOC102781594,LOC102298269,LOC103382882,LOC106941466,LOC103156466,LOC101472471,LOC106916645,LOC106525550,LOC107395349,LOC103356441 other upstream 2421 16771058 ~ 16831243 (+)
tmem168a LOC103368481 other upstream 553603 16267136 ~ 16280061 (+)
yaf2 yaf2,LOC102236902 other upstream 1322486 15494677 ~ 15511178 (+)
prickle1b prickle1 other upstream 1361777 15441985 ~ 15471887 (+)
lrrc17 LOC103355197,LOC103382847 other upstream 1502486 15300522 ~ 15331178 (+)
stmp1 NA other downstream 11436 16866310 ~ 16867796 (+)
morn2 morn2 other downstream 25402 16880276 ~ 16916928 (+)
G228335 ahcyl2,LOC103371314,LOC107725924,LOC107656398 other downstream 64789 16919663 ~ 16922823 (+)
srr srr,LOC105936311,LOC103459528 other downstream 1675262 18530136 ~ 18533114 (+)
LOC120553630 muc19 other downstream 1967958 18822832 ~ 18855314 (+)

Expression


Co-expression Network