LOC120553391


Basic Information

Item Value
gene id LOC120553391
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 16867831 ~ 16868673 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791736.1
CACTGTCCCAGTTGAAGCCAGTCAGTTGCCAGTTACAACAGTGCCAAGTCCAAAACTGATGGGTAAATAATCTCTCATCCTATTGGAAGTGACCCTGACATCTTCCACCATGCCCACCAAATCCAGGAAATCAAGGTCCCACAGTTCTAGGCCCGCCAAGAAGACTGGGAGTCCAAAAACACCCAAAAAGAGGTCCTCTAGTGCCAAATCCACCAAGACAGAGGTGGACATCCTCAGCCCAGCAGCCATGGAGAATGTCTACTACATTTCTCACAATGCAGTGGATTGTCTGGAGTTCAGAGGCTTTGGGTGGccaaattcaaataaaaagaagaaaaagaagggaaCAAAACGGAAGAAGAAAAagtaaattataatttttgccAAACAAATGTAAATTTCCCCTCCCTttggttaaaatgtgtttaaGTTTTAAATACCTTGCTGATGGCCCCATCTGGTGGACACATTTGTAGTAATACAGCGAGTATACCAAGTTTTGACTGTTGTGGAACCAGTGCAATgcagatgttttgtttttcttccacaAATTCATACAGCAGTGCAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791736.1 True 571 mRNA 0.43 3 16867831 16868673

Neighbor

gene id symbol gene type direction distance location
LOC120553389 LOC103371308,LOC102780635,LOC101471206 coding downstream 1637 16854992 ~ 16866194 (-)
LOC120553145 lrrn3,LOC103356442 coding downstream 215698 16635871 ~ 16652133 (-)
ifrd1 ifrd1 coding downstream 538223 16322115 ~ 16329608 (-)
foxp2 foxp2 coding downstream 702926 16059509 ~ 16164905 (-)
mdfic mdfic coding downstream 830673 16015688 ~ 16037158 (-)
dhx57 dhx57 coding upstream 1063 16869736 ~ 16880178 (-)
strip2 strip2 coding upstream 14138 16882811 ~ 16912629 (-)
ahcyl2b ahcyl2,LOC103371314 coding upstream 48632 16917305 ~ 16964944 (-)
tmem209 tmem209 coding upstream 96898 16965571 ~ 16972447 (-)
prdm4 prdm4,LOC102777312 coding upstream 103859 16972532 ~ 16979035 (-)
G228295 NA non-coding downstream 36592 16824829 ~ 16831239 (-)
G228290 NA non-coding downstream 120791 16746743 ~ 16747040 (-)
G228283 NA non-coding downstream 331538 16536018 ~ 16536293 (-)
G228221 gpr85,LOC106576049 non-coding downstream 643682 16216115 ~ 16224149 (-)
G228120 NA non-coding downstream 1336392 15531131 ~ 15531439 (-)
G228360 NA non-coding upstream 45934 16914607 ~ 16949806 (-)
G228363 NA non-coding upstream 84270 16952943 ~ 17007000 (-)
G228401 NA non-coding upstream 268597 17137270 ~ 17138275 (-)
G228423 NA non-coding upstream 352532 17221205 ~ 17222228 (-)
G228439 kdm5a non-coding upstream 374792 17243465 ~ 17243980 (-)
G228291 LOC103356441,LOC102298269,LOC102212027 other downstream 44399 16748842 ~ 16823432 (-)
G228191 NA other downstream 1075978 15771238 ~ 15791853 (-)
znf800b znf800,LOC103364713,LOC103355189,LOC108412280 other downstream 1777848 15055475 ~ 15089983 (-)
grm8a grm8 other downstream 1814546 14634110 ~ 15053285 (-)
waslb LOC103370764 other downstream 2417242 14424237 ~ 14450589 (-)
slc37a3 slc37a3 other upstream 139051 17007724 ~ 17020735 (-)
G228465 NA other upstream 426449 17295122 ~ 17302198 (-)
tafa5a fam19a5,LOC103356475,LOC102793695 other upstream 961943 17830616 ~ 18100995 (-)
gramd4a gramd4,LOC103376144 other upstream 1494586 18363259 ~ 18421407 (-)
LOC120553633 slc2a13,LOC103369283 other upstream 1869723 18738396 ~ 18823090 (-)

Expression


Co-expression Network