ankrd16 (ankrd16,LOC102787719)


Basic Information

Item Value
gene id ankrd16
gene name ankrd16,LOC102787719
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 23886747 ~ 23897898 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791740.1
GGTCATGGTTGGCCACTTTATTTTTCACTACTCTGCGAAAACAACCTGTGAAATACATTTCTCCAGCATGTATTGAAGAAGCCCAGCTTAACTATTTTCTGTTCTGTCAGGTGACTGTGTGTTTAACCTCCACTCAGGATGGACGAAAACACTTTAAAACTCCTGGCGAAACTCACTCAGGAGGGACAGTTAAGCGCTCTGGATAAACGGATAACATTAGGTGGCTCGGCGGTGGCTCAGACTGTCAGCAGCAAACACTTCGGTCGGTCAGGGGACACCCTGCTGCACTACGCTGCCAGAAAGGGACACCTGGACATTGTGGAATATCTAATAAAGCAGGTAGGCATGGATGTGGAGGTGTACAACAACGACTACAAGAGGCCGCTGCACGAAGCTGCGTCTATGAGCCACCAGGCTTGTGTTAGCTACCTGCTCCGGGAAGGAGCCAAGGTGGACAGTCTGAAGAAAGCTGActgGACTCCCCTGATGATGGCCTGCACCCGGAGAAACCTGGCCGTGATCCAGGAGCTGCTGCGCCACGGCGCCGACCCTGCACTGAGAAACAAAGACGGCTGGAACTCCTTCCACATTGCCTGCAGGGAGGGCGATCCCCTGGTCATACAGCACATGCTTCTTGTCGCGCCGGATGTCTGGAAGACGGAGAGCAAGACGCGCAGGACACCACTACACACTGCAGCGATGCACGGCTGTGAGGAGGTTGTTCGGATCTTGCTGGAGAGATGTGGCTACACCCCCGACAGCGCTGACAGCTGTGGAGTCACTGCTTTCATGGACGCTGTCAGGAACGGACACATTTCTGTGGCCAGGCTGCTTTTAGAGAAGCATCAGGCGTCTCCCACAGCAGCGGACATACTTGGGGCTCAGGCGGTGCACCAGGTGGCTGTCACCGGCCAGGAGGAGGCGCTGCGGTATCTGGTGCGGGACCTGAATGTAGACGTCAATCAAAGAGCAACTGGCATCCAGCTCACTGCCCTGCATTACGCTGCAAAGgagggCCATACGTCCACTATAAAAACACTGCTGGAGTTGGGGGCAGATCTTCATGTTCGGGACAAAAAGGGAAGAACTGCTCTCCATATGGCCTGCATCGGGCAGCATGCAGACGCCGCCGGGACACTCCTGCAGCTCGGACTCAAAGACTCCGAGGATGCGTGTGGCACAACAGCACGGCAGCATGCCAGGAAACCAGACGTAGTGCGAGTGTTTGAATGTGGCTTACAGGACCCATTATAAACGATACCTTAGTTATACAGAACACAGATTTAGGTATATAACATTCATATAAGTAAAGAAAAGAACCTGAAACAAGTAAAGTCAAACAGTTTAGGTTGTGAAGATTAGCATACATCTTTACTTGCACTGTGTTGTGTAGTGGACACATGACTTTAAATAAAGTCTGTCTTTAGTCTCTTA

Function

symbol description
ankrd16 Orthologous to human ANKRD16 (ankyrin repeat domain 16).

NR:

description
PREDICTED: ankyrin repeat domain-containing protein 16 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791740.1 True 1434 mRNA 0.52 7 23886747 23897898

Neighbor

gene id symbol gene type direction distance location
ppp6r2a LOC104923754 coding upstream 179779 23686003 ~ 23706968 (+)
LOC120553166 LOC105929793,LOC103363829,LOC108250965 coding upstream 210269 23654475 ~ 23676478 (+)
LOC120553165 LOC104923755 coding upstream 235567 23630935 ~ 23651180 (+)
psmc2 psmc2,LOC103382982 coding upstream 292368 23588975 ~ 23594379 (+)
pmpcb pmpcb,LOC106576546 coding upstream 324528 23532258 ~ 23562219 (+)
gdi2 gdi2,LOC104923747 coding downstream 1343 23899241 ~ 23913813 (+)
asb13a.1 LOC103363234,LOC100709988,LOC105929846,LOC101482319,LOC102215476,LOC108241840 coding downstream 26258 23924156 ~ 23933876 (+)
mkln1 mkln1 coding downstream 311721 24209619 ~ 24249507 (+)
ift46 LOC107372934 coding downstream 403867 24301765 ~ 24308444 (+)
LOC120553464 LOC107381693,LOC105020203 coding downstream 422378 24320276 ~ 24365349 (+)
G229841 cbll1 non-coding upstream 207439 23667703 ~ 23679308 (+)
G229821 dnajc2 non-coding upstream 301248 23579721 ~ 23585499 (+)
LOC120552982 NA non-coding upstream 628886 23232498 ~ 23257861 (+)
G229676 NA non-coding upstream 678547 23207076 ~ 23208200 (+)
G229672 NA non-coding upstream 707795 23177956 ~ 23178952 (+)
G229938 NA non-coding downstream 17913 23915811 ~ 23916388 (+)
G229945 NA non-coding downstream 49795 23947693 ~ 23948538 (+)
LOC120553072 NA non-coding downstream 72049 23969947 ~ 23971613 (+)
G229974 NA non-coding downstream 96668 23994566 ~ 23994835 (+)
G229976 net1 non-coding downstream 167316 24065214 ~ 24066989 (+)
adm2a NA other upstream 38123 23833018 ~ 23848624 (+)
kcnc2 kcnc2,LOC100689973,LOC101475944 other upstream 446084 23315421 ~ 23440663 (+)
phlda1 phlda1 other upstream 1143568 22739717 ~ 22743179 (+)
G229428 NA other upstream 2018450 21867201 ~ 21868297 (+)
G229422 NA other upstream 2027538 21857983 ~ 21859209 (+)
LOC120553686 LOC105929833,LOC107382334 other downstream 36402 23934300 ~ 23945640 (+)
LOC120553083 NA other downstream 411644 24309542 ~ 24314707 (+)
G230148 LOC102781993,LOC101465723 other downstream 722914 24620812 ~ 24778258 (+)
LOC120553523 NA other downstream 1464984 25362882 ~ 25373996 (+)
msrb3 msrb3 other downstream 1743942 25641840 ~ 25662819 (+)

Expression


Co-expression Network