LOC120553398


Basic Information

Item Value
gene id LOC120553398
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 19487602 ~ 19495323 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791747.1
ACTGTCTGCAGAACCATGGATCCTCACTCCGCCTGTCTGCTGCTGTTTCTCACCTGCCTGGCAGGATTTTCTGCCAGTGAAAGTGAGAACAGTGGAACTATGGGGGAAATTTCATACGGGCCATCCTCCCTGGAGATTGACGGGGTGGATGTAGTGTCAGTGGGAATCCCATATGGTTTCCAGTGCACAGCGGAGTGCTACCCGGACTGCAGGTACAGCTGGACCAGAGGTAACGAGACCACTCAGGGGCCTGAGCTGAGCCTGCGGCTGCTGCAGAGAGTGCCAACGCAGACCCTGACCTGCACAGTGGTCAACCCTGCAACAGGGAGGTCTGCCTCTGTCCAAAAGACGCTGCAAGTGACAGCTGGACCATCAAACGTACAGATCAGCGGTCCAGCCTTTCTGACTTACGGAGTTGCATCCATCTTTACCTGCTCAGCTGACTGCTACCCGTCCTGCAGCTACTCCTGGACCGTTGTCTGGGAACGGGAGCCGATCAGTAGTGCACAGGGCAACACCATTTCTGTCACTCCAGCTGCCAGTACTGTCCTCAGTGAAAGTCTGATCTGTGAGGCTCAGGACACCATCTCATATCTGTTCATCTCTACGACTGTGTCGCTACCGGTGGCAAGCACATCTGACATCAGCATTATTGGGGACAGTACAGTGACGATGGGAAAGCAGTACGTGTTCATATGCCAAGCCACGTGCGTCCCGTCCTGCAACTTTGCGTGGCAGTACATGGGGAAGACTCTCTATGGGGACCAGATCCAGATACCCATCCTGCATCAGGGGGAGAAGACAAAGTTTGCCAGTCACCTGCAGATCACTTTCAGTGACTACTCTAAAATTGAGCCTCTGACCTGCGAGGCAACAAACGTTTTGACTGACACCACTATCACCTCCACTATAGACCTCACAGTCATCGACCCCATCTCAGTGAGCCCCAGCTCCCAGACCCCGCTGCCAGTGGCAGGCAAGTCTTTCTCTCTGCAGTGTGTTGGCTCTCAGAACCCAGGCTCCATCACATGGCTGAAGAACAAACAGCCAATGGCAGCATCTGAACGAGTGCTTTTCTCCCCTGACAACACCACAGTCACCTTCAGTCCTCTCCTGCAGACAGATGAAGGTTTATACTATTGCGTGGTGGCAGAGGGGGGGGAGCCCATCCAGTCTGTTGGCTACAAGATGCAAGTTGACTACGGGCCGTCTTCGGTGGTGATCAGTGGGCTCGATGTAATGACTGTAGGAATGGCATATGATTTCCAGTGCTCAGCCAGCTGTCACCCGACATGCCAGTTCACCTGGACCAGGGGTAATCTGACCTATCAGGGCTCCAATCTCATCTTGCATTTTGAGGAACTACTGCCAACACAAAACCTGACCTGCACTGCACTCAATCCAGCTACAGGAATATCAGTCACTGCACAAAAGACGCTGCTAGTGATAGCTGGACCATCAAACATACAGATCAGCGGTCCAGCCTTTCTGACTGCAGGAGTCACTTCCAACTTTACCTGCTCAGCTGACTGCTACCCGTCCTGCAGCTACTCCTGGACCGTTGGCTGGGATTGGGAGACGTTCAGTACTGCACAGGGCAACACCATTTCTGTCACTCCTCCTGCTAGTTTTGTTGGCTCTGAAACTCTGATCTGTAAGGCCCAGGACACCGCCTCAAATCTCTACATCTATAGGGCTCGGCAGCTGCAGGTGGCAAGTTTATTCAACATTAACATCGCTGGTGACAGTGCCGTGGCAATTGGAAAAacgtacacatacacatgctATGTCACATGTACTCCGTCCTGTGTGTTCACTTGGACGTTCATGGGGAAGACTTACGAGGGCGATCAGCTGCAGATCACGGTTAGCGACTACCCTAAAACTGGGCCTCTAACCTGTGAGGCAACCAACAATGTGTCTCACGCCACTATCAGCGCCACCAAGAACCTCACTGTCATTGACCCATTCTCAGTGCGCCCCAGCTCCCAGGCCCTGCCGGTTGCAGGCGAGCCTTTCTCTCTGCAGTGCGTTGGCCCCCAGGATCCAGCCTCCATCTCATGGCTCAAGAACGGACGGCAAATGCCAGTCTCTGACGTAGTGCATTTCTCCCCTGACAACGCCACGATCACCTTCAGCTCTCTCTTGCGAGACGATGAAGGGGTATACAAATGTTTGGTAGTGGAGACTGGGAACCTCACTACCAACCCACTGGTAGCAGTTGTGGGTGGAACCCCCATCCTGTCTTTTGGCTACCTGATGCAAGTAATATATGGGCCAGATGAGGCGCTGATTGTGAAACCCGACGAAGAGCCGGTGGGTGAGATGATGTTCACTCTGCCTGGATCCACAACAGAGCTGCAGTGTCTAACTGACTGCTTCCCCGCCTGCTCCATCAACTGGTTTTACCGAGGCTCGCTCCTGGCTACAAATGCCTCCATACTCTTCACGCCTGTAACACCTCCATACGAGGACACCCTCACCTGTACGGCATTCAACCCGGcgacaaagaaaaacagaacagCTGAGACCACAGCGGTGGTGCCTGATGGGCCTAGGAACGTGATGATTAAAGGACCAGATGCTCTCGAAATCGGGGTCACAGCGAGCTTTACGTGCTCCGCCGAGTGCACCCCTTCCTGCAGCTTTACGTGGACCTTGTACGGGAAGACTGTGACCGGTAGCGGGGTTGACATCACCGTGAACCGCCAAGTTTCCGAAGAGTCCATCAGCTGCCAGGCTGAGAACACATTCACCGGGAAGACGGCGGCTGTCAACCAGACGCTCAGTGTCTCAGATCCTCACTGGTGTGGATGTTAAGACACTGGAAGAACATTGTTCAACTACATTGTCCCAAATTGCAAATGCTCTGAGCACAGTTATAGTTTGGTAATCTTTTAATTACAGTTATAGTTTggtaatctttttttattaatgacaCTAAGGCTGTATTTGCTCAAGCATCATTTACTGTGACTGTGATGATGGACTGGTGCCCTGAATAGGGTGTTTTCCTGACTTCCATGCTGGGACAGGTTCCAACCTCTTGGTGACCCTGAACAAGATTATAAACGGATATAGAGAAAGGATATATGGATTGTGTGCTTGAGTGATACGTTTTTCAGGTTTTAAATTACACAAGGCTAATCTCGTTTTCTTTCATGATGTATTTCCATTTGTCttgccaaacactatgcactaTTATGCTTAATAAACAAGGAACTAATTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791747.1 True 3230 mRNA 0.52 13 19487602 19495323

Neighbor

gene id symbol gene type direction distance location
LOC120553799 NA coding upstream 4450 19478917 ~ 19483152 (+)
LOC120553798 LOC104924523,LOC103359230,LOC104954154,LOC103382963,LOC106531213 coding upstream 8327 19473150 ~ 19479275 (+)
mapk11 mapk11,LOC100700904,LOC103382962 coding upstream 16629 19454824 ~ 19470973 (+)
trnaq-uug_5 NA coding upstream 28448 19459083 ~ 19459154 (+)
utp20 utp20 coding upstream 90796 19364203 ~ 19396806 (+)
atp23 atp23,LOC102777000,LOC106609469 coding downstream 9057 19504380 ~ 19507591 (+)
LOC120553510 slc16a7,LOC103364250 coding downstream 99090 19594413 ~ 19627713 (+)
LOC120553417 syn3 coding downstream 428448 19923771 ~ 20047996 (+)
LOC120553415 NA coding downstream 629318 20124641 ~ 20162039 (+)
LOC120553750 NA coding downstream 679128 20174451 ~ 20184363 (+)
G228787 NA non-coding upstream 66773 19420372 ~ 19420829 (+)
LOC120553381 NA non-coding upstream 578721 18905236 ~ 18908881 (+)
LOC120553383 NA non-coding upstream 590075 18892174 ~ 18897527 (+)
G228622 NA non-coding upstream 748118 18738484 ~ 18739484 (+)
G228611 LOC102192848,LOC101469293 non-coding upstream 810037 18676351 ~ 18677565 (+)
LOC120553618 NA non-coding downstream 28752 19524075 ~ 19559043 (+)
LOC120553213 NA non-coding downstream 220939 19716262 ~ 19717346 (+)
G228905 NA non-coding downstream 314352 19809675 ~ 19810580 (+)
LOC120553215 NA non-coding downstream 338684 19834007 ~ 19841662 (+)
G228912 NA non-coding downstream 374070 19869393 ~ 19871723 (+)
G228784 LOC103359233,LOC104943309,LOC100709697 other upstream 73898 19410490 ~ 19413704 (+)
LOC120553164 NA other upstream 132051 19352983 ~ 19355551 (+)
LOC120553630 muc19 other upstream 632288 18822832 ~ 18855314 (+)
srr srr,LOC105936311,LOC103459528 other upstream 954488 18530136 ~ 18533114 (+)
G228335 ahcyl2,LOC103371314,LOC107725924,LOC107656398 other upstream 2564779 16919663 ~ 16922823 (+)
LOC120553210 LOC104943308 other downstream 136614 19631937 ~ 19839382 (+)
LOC120553104 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC103459764,LOC106945279 other downstream 357605 19852928 ~ 19905952 (+)
G228924 NA other downstream 486925 19982248 ~ 19985648 (+)
LOC120553749 NA other downstream 651755 20147078 ~ 20173407 (+)
LOC120553418 NA other downstream 695605 20190928 ~ 20225185 (+)

Expression


Co-expression Network