cd9b (LOC103364503,LOC102202019,LOC101471915,LOC102790892,LOC100690342,LOC102311668)


Basic Information

Item Value
gene id cd9b
gene name LOC103364503,LOC102202019,LOC101471915,LOC102790892,LOC100690342,LOC102311668
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 7051855 ~ 7073003 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791779.1
ATCTGTTGAAGGCGCGCTCTGTCCACCCTGCTCCAACCAACCCCAACCAACCGACAGTTGACGGAAGTTATCGAACGGAGCCGAACCGAGCCGAACGCGACACATCCAAACTGAACCTATAAATTGGACACCTAAAAACTGACAAACGGCGAGAGTTGTATCCAGATAGGCtattataggctatatataggCTATAACTTTTTGATACTAGCTAACACAGTAAAAACACAGCAGGGATGACGGCTCTAAGCAGCTGGGAGCTGTGCGTGAAGTACGCCCTCTTCATCTTTAATTTCGTCTTCTGGCTGGCAGGTACTGGGGTGCTGGCTGTAGCCCTGTGGCTGCGATTTGACTCGAGGACAGTAGGACTGTTTGAAAGCGAGGACTCACCTACAGTCTTCTTCACTGGTGTGTACATCCTGATTGCGGCGGGGGCTCTGATGATGGTCGTGGGATTCCTGGGATGCTGCGGCGCCATTAAAGAGTCGCCGTGCATGCTGGGATTGtttttcctcttcctgctcctcaTCTTCGCTGTGGAAGTTGCTGCTGGGATCTGGGGCCTCTCCAACAAGGACAGGGTGGTGGAGGACGTTACAGAGTTCTATAAGCAGACCTACAGCAACTACAGAGACACCAAACAGGATGCACTGAAGGAGACGCTGCGTCTCATCCACTTTGGACTGGACTGCTGCGGCCCCACAGGGACGGTGATTGATGCTGCCAAAGATATCTGCCCCCAGCAGGAAGGACTGGCGCTCCTCGTCACCAAGAGTTGTCCGGCTGCCATCGACGAGATGTTCAACAACAAACTGCACATTATCGGCGGCGTCGGCATCGGTATCGGTGTCATCATGATCTTTGGGATGATCTTCAGCAtgatgctctgctgtgccattAAGAAGTCCAGGGACTTTGTCTGAACAAACCCCCTCCATCTTTGACTTATGTGTCCTTACATTAacaacctcttttttttttttttttgagattaTATCAGTTTAATAATCATAACGTTCGTCCCTTAGTTTATTGCTTGGATCCATACAGGATGAACACACCTGTGAGAGTATGGGATGTCTTAATATTTTGGCTCTTTTCCACTTTGGGCACACATGTAATCTCTCTACAGAGGAATGTGgacaaagtttatttttttttttttttttccttcattctGGTACCCAATATAATGAATGTACATCCTACTTTTCATCACAACACAGAACCGGTTGCTCTGAAGGAAAAAGACATTGAGTGCTGCCCTCTAGAGGACAATGAAGATCCCAACTATTAACTCTTCTAATATCTGTTCAGTTGATGTGAAATGTATTAAGTTTGCCTGTGGTTGGTTTGTAATCTAACCGGCTTTTTGCAGCtaactgaattttatttttgCTCGTTGCTTAAATGACATGTCTTGATTTTTAAGCAGAAGTGagttatatgcaaatattttGAAAGCAGTTTAAATATATTTGaaatgccaaataaatgaaCTAATGAACACTGA
>XM_039791780.1
TCCCTCCCCCCAATGACTTCCTAAGTATACCCAGGTGAGCCATGCAAGGGTGTGGTTCACCAACAACAACTGTCTTGTTTTCAGTCTGTCTTTTTACTTCCTCCGAGAAAGAAGACAGTTTAACTCTTGAACAGAGAACGCTCACGTTTGGATTTTCTTCATAAAGACATCTAAATCTTGATCTCGGAGCCATGGGGGCACTGCAGTGTGTCAAAtacattgtgtttgtgttcaacTTTCTCTTCTGGCTGGCAGGTACTGGGGTGCTGGCTGTAGCCCTGTGGCTGCGATTTGACTCGAGGACAGTAGGACTGTTTGAAAGCGAGGACTCACCTACAGTCTTCTTCACTGGTGTGTACATCCTGATTGCGGCGGGGGCTCTGATGATGGTCGTGGGATTCCTGGGATGCTGCGGCGCCATTAAAGAGTCGCCGTGCATGCTGGGATTGtttttcctcttcctgctcctcaTCTTCGCTGTGGAAGTTGCTGCTGGGATCTGGGGCCTCTCCAACAAGGACAGGGTGGTGGAGGACGTTACAGAGTTCTATAAGCAGACCTACAGCAACTACAGAGACACCAAACAGGATGCACTGAAGGAGACGCTGCGTCTCATCCACTTTGGACTGGACTGCTGCGGCCCCACAGGGACGGTGATTGATGCTGCCAAAGATATCTGCCCCCAGCAGGAAGGACTGGCGCTCCTCGTCACCAAGAGTTGTCCGGCTGCCATCGACGAGATGTTCAACAACAAACTGCACATTATCGGCGGCGTCGGCATCGGTATCGGTGTCATCATGATCTTTGGGATGATCTTCAGCAtgatgctctgctgtgccattAAGAAGTCCAGGGACTTTGTCTGAACAAACCCCCTCCATCTTTGACTTATGTGTCCTTACATTAacaacctcttttttttttttttttgagattaTATCAGTTTAATAATCATAACGTTCGTCCCTTAGTTTATTGCTTGGATCCATACAGGATGAACACACCTGTGAGAGTATGGGATGTCTTAATATTTTGGCTCTTTTCCACTTTGGGCACACATGTAATCTCTCTACAGAGGAATGTGgacaaagtttatttttttttttttttttccttcattctGGTACCCAATATAATGAATGTACATCCTACTTTTCATCACAACACAGAACCGGTTGCTCTGAAGGAAAAAGACATTGAGTGCTGCCCTCTAGAGGACAATGAAGATCCCAACTATTAACTCTTCTAATATCTGTTCAGTTGATGTGAAATGTATTAAGTTTGCCTGTGGTTGGTTTGTAATCTAACCGGCTTTTTGCAGCtaactgaattttatttttgCTCGTTGCTTAAATGACATGTCTTGATTTTTAAGCAGAAGTGagttatatgcaaatattttGAAAGCAGTTTAAATATATTTGaaatgccaaataaatgaaCTAATGAACACTGA

Function

NR:

description
PREDICTED: CD9 antigen-like isoform X1

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K06460 CD9, TSPAN29; CD9 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791779.1 True 1513 mRNA 0.45 8 7051855 7073003
XM_039791780.1 False 1456 mRNA 0.44 8 7059285 7073003

Neighbor

gene id symbol gene type direction distance location
LOC120553268 NA coding upstream 39575 6976407 ~ 7012280 (+)
LOC120553270 NA coding upstream 56267 6976332 ~ 6995588 (+)
gnsa gns,LOC102788091 coding upstream 317446 6719108 ~ 6734409 (+)
sfmbt2 sfmbt2 coding upstream 415174 6579112 ~ 6636681 (+)
itih5 itih5 coding upstream 498769 6535175 ~ 6553086 (+)
dclre1c dclre1c,LOC106595997 coding downstream 16337 7089340 ~ 7100004 (+)
lamb1b lamb1,LOC103364103 coding downstream 42959 7115962 ~ 7144005 (+)
trnaw-cca_35 NA coding downstream 74266 7147269 ~ 7147340 (+)
vezt vezt coding downstream 167849 7240852 ~ 7255885 (+)
metap2a metap2,LOC104945620,LOC102784010,LOC102294382 coding downstream 184267 7257270 ~ 7267450 (+)
LOC120553621 NA non-coding upstream 550795 6429094 ~ 6501060 (+)
LOC120553126 NA non-coding upstream 761956 6183044 ~ 6289899 (+)
G226097 NA non-coding upstream 953947 6097678 ~ 6097908 (+)
G226085 NA non-coding upstream 1132441 5919094 ~ 5919414 (+)
G226042 NA non-coding upstream 1275422 5750128 ~ 5776433 (+)
G226292 eri1,LOC102785739 non-coding downstream 84487 7157490 ~ 7157887 (+)
G226306 ndufa12 non-coding downstream 140389 7213392 ~ 7216386 (+)
G226316 NA non-coding downstream 194506 7267509 ~ 7268758 (+)
G226317 NA non-coding downstream 196101 7269104 ~ 7270753 (+)
G226318 NA non-coding downstream 198314 7271317 ~ 7271707 (+)
prkcq prkcq,LOC102789446 other upstream 365216 6660520 ~ 6686639 (+)
abcc9 abcc9,LOC107387088 other upstream 1678218 5281258 ~ 5373637 (+)
G225894 NA other upstream 2393886 4657444 ~ 4657969 (+)
LOC120553793 NA other upstream 3112901 3935674 ~ 3938954 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other upstream 3210681 3814481 ~ 3841174 (+)
snrpf snrpf,LOC106576293 other downstream 245514 7318517 ~ 7321189 (+)
amdhd1 amdhd1 other downstream 250067 7323070 ~ 7332259 (+)
klhl42 klhl42 other downstream 290322 7363325 ~ 7368216 (+)
nrip2 LOC102781986,LOC100711207,LOC102191975 other downstream 297439 7370442 ~ 7400399 (+)
ascl1a ascl1 other downstream 350615 7423618 ~ 7426254 (+)

Expression


Co-expression Network