gnsa (gns,LOC102788091)


Basic Information

Item Value
gene id gnsa
gene name gns,LOC102788091
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 6719108 ~ 6734409 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791819.1
ATGGGTTTAAATCGCTCGTTCCCGCTGGTCTTACTGAATTGTCTGCTAATCTGCGTCACTCTGTGGAGCAACCCGAGCAGCGGTGCGTTTGCTAAATCATCCCGGAGACCTAACATTGTTTTGATCCTCACCGACGACTTGGACGTCGCTATCGGGGGTCTGAGTCCACTCACCAAGACGAAAAAACTAATTGGTGATGCAGGGATATCCTTCACAAATGCATTTGTCGCCAGCCCGCTGTGCTGCCCGAGTCGAGCCAGCATCCTGACAGGGAAATACCCCCACAACCACCACGTCATCAACAACACCTTAGAGGGAAACTGCAGCAGCAAAGTCTGGCAGAAGAGCGAGGAAGCACACACCTTCCCCGCACTGCTGAAGACGTACGCCGGCTACCAGACCTTCTTCGCTGGGAAATACCTTAACCAGtaCGGGCACTCAGAGGCTGGTGGAGTGGCGCACGTTCCTCCAGGCTGGAACTACTGGGTCGGACTGGAGAAGAACTCTAAATACTACAACTACACTCTGTCAGTGAATGGAAAGCCTGAGGAGCACGGAGCAGACTACAGCAAAGACTACCTGACAGACGTCCTGgcaAACCGGTCTCTGGACTTCCTCCAGTATAAATCCAACTACCAGCCGTTCTTCATGATGGTGTCCATTCCGGCCCCCCACTCCCCTTGGACAGCGGCTCCTCAGTACCAGAACAGCTTCAACAACACCAAGGCTCCCAGAGACCCCAACTTTAACGTCCACGGCAAGGACAAACACTGGTTGATCAGACAGGCTAAAACCCCCATGTCCAACTCTTCTGTTCAGTTTCTGGATGATGCTTTCAGGAAACGGTGGCGAACGTTGCTGTCCGTGGACGACCTGGTGGAGAAAATAGTGAAGAGGTTGGAGGTCGGCGTTGAACTGGACAATACGTACATCTTCTTTACCTCTGACAACGGCTaccacacaggtcagttctctcttcctctggaTAAGAGGCAGCTCTACGAGTTTGACATCCGAGTTCCTCTCATGGTCAGAGGACCAAACATCAAGCCCAACCAGACCAGCcagATGCTGCTGTCCAACGTCGACCTCGGTCCGACCATCCTGGACATCGCCGGCTACAACGTCAACAAGACGCAGATGGACGGCATGTCCTTCCTGCCCGTTATGGAGGGGAAGATGAACAGCAGCAGCTGGAGAACTGACATCCTGGTGGAGTATGAAGGAGAGGGCAGCAACGTGACGGACCCGGCCTGCCCTCTGCTGGGACCAGGAGTGTCGGAGTGTTtcccagactgtgtgtgtgaggactCTTACAACAACACCTACGCATGTGTGCGCACAGTCGCCCCCTCTGCCAACCTGCAGTACTGCGAGTTCGACGATAATGAGGTGTTTGTAGAAGTCTACAACGTGACCGCAGACCCCTACCAGCTGACCAACATCGCAAAGACCATCGACCAGGAAGTCCTGGAGAAGATGAACCACCGGTTGATGATGCTGCAGTCCTGCTCCGGACAGTCGTGTCGGACACCCGGCGTGTACGATCCAAGGTATAAATTCGACCCACGACAGATGTTTACGAGCCACAGCTGGCGGCTCGGCAGACTCCGACAGTAGATGAAGTGAGAAGAAGGACGGAGGGAGAAGACGGAGGAAGAGAAAGgctgtattgtatttttatatattcagCCTTTCCTGCTATTGTAGCCTTGTTTTCAGGCCTCCTGAGCCAGTCTCTTTGTAGATGGATGGAGAAGGGATCGGGGCGGTTGCCATAGAGACGGAGGCCTCTCTGGGTGCAGAACCCACCTTGTTAAGCTTCCAGATTGGGCTGCCGTTTAGTGAGTTTGTCAGTGGGTGTGCAGGGAAATTATTCAGGATGGATTTACACTCGCAAGCCATTAATTCCTGTTTTCGTGTAAGCATTATTGTGTCCGCTCAGTCAGTCGTATCAATTTAAAATTctgcaaacaaatatttgacCCAGTTCTTATAAATccaagtctgtttttttttctctctgttgagAAAATCATATCAATGATCCAAAACAGTGGCCaggtttttgtgttatttactCGTCTGAATACTGTACAGGTTGCCTGCTGTGAGAATCTTTTTGTTTTGGGGTATTTTTACTAAACCAATCAAAATTAGCAATACCTTTTGACATTGATTATCCCTCGACTGTGTATGGCCTAATCATAGACTGCATATAAAAAGTGTCCACCGCCTACCTTCAACTTTATATAAAGTCTATGAGCCTAATAGACAGCTGGCAAACAATACCAGGTAAATAACTACAGTGTAATTTGTGATAATGTAGATCTCTTGAGTTTAACACGTAGtgatcaacaacaacaacgtggTTACTTGATAATCTGTTGAGGACCAACCGAATGCAGCGAAACAATCCTGTATTAGACGGTAAAGGTACGGTCACATGACCTGACAAAGGACGTCACGCTTCTGATGcgggtaataaaataaatactgatCGGAGCGATCACAGCCTGTAAACCGCATATATCTGTAGTGTGATAATGAACTAAACACGACGATAAAAAAACGTCAGCGTTGAACAAAAGGTGAACTCTGTCGGCGAAGGAAACGCACGCTTGAATCCAACCGGAATGTTGGCTTCAGATTCACAGGACAGATGTTTCATGTGAtctagaaataaaaaaattaaaagaactGGGTTGTAAAGAGCGCCACCCACAGAAACTTTCTAAACAGGCAGTCCAACAGAAAACGTCTCACAGACATGACCCCAGCTGTCACTTCCACAGTCAACAACATATCATGAACAAAATGACCGAATAGTTATTAGACACTGGAAGCAGCCAACATGTGGTGCATGGTGGCTTTAAGGGAAAAATTTGGACACAAATTTTCAGATTATTTTTGTCACAATAAATCAGATGGGCAGAAGAATCAACATGACTGAACATTTAGCAAACAGAAACCGGAATTACAGACTTAAAACTGGTCAgatctttagcaagttttggcAAAAAAAACCATCTATCATTCAAGTGTATCAGAAAACACTGAGTAAAAAGCAACTTTTGTGACTATAAGAATAGTATACGAATTGCTAGTGGCATCAATGAAAGCCTCCATCCAagttacatttaaaaacttGACATAACGGCTCATTATTGACATTTTAAGTGTCCCCTACATCAGACGTAAATTATTTCAGTGATTTGTCTCGACTGTGAGCAGTGTTAAAGCACcttttttttggtcattttcaAATTTCAGATTAATTGCCACTTTTTGTCTTGATTCCCTATTTGGATTTTATTCCATCACGTGTTGAACATTTCAAACTTGCTAACTGCCACTTTAAATGAACAGAAACACATGCATTGTTATGTCGAGGAGGAAGATTTGACAACTTCATCAAATCAAATATTTCActtatttcttgttttgtagCGTTTCACTGAGCCAAATGTTAGACTTTGGTTCGATATAGAGATTAACGTTCTtgccaaaataaaagtcctttTTTTCATCGT

Function

symbol description
gns Enables sulfuric ester hydrolase activity. Predicted to be involved in keratan sulfate catabolic process. Located in extracellular exosome. Implicated in mucopolysaccharidosis III and mucopolysaccharidosis type IIID.

NR:

description
PREDICTED: N-acetylglucosamine-6-sulfatase

GO: NA

KEGG:

id description
K01137 GNS; N-acetylglucosamine-6-sulfatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791819.1 True 3533 mRNA 0.46 14 6719108 6734409

Neighbor

gene id symbol gene type direction distance location
sfmbt2 sfmbt2 coding upstream 82427 6579112 ~ 6636681 (+)
itih5 itih5 coding upstream 166022 6535175 ~ 6553086 (+)
kin kin,LOC103372864 coding upstream 199656 6513845 ~ 6519452 (+)
echdc3 echdc3,LOC102797483 coding upstream 1319805 5393640 ~ 5399303 (+)
kcnj8 kcnj8 coding upstream 1326168 5383033 ~ 5392940 (+)
LOC120553270 NA coding downstream 241923 6976332 ~ 6995588 (+)
LOC120553268 NA coding downstream 241998 6976407 ~ 7012280 (+)
cd9b LOC103364503,LOC102202019,LOC101471915,LOC102790892,LOC100690342,LOC102311668 coding downstream 317446 7051855 ~ 7073003 (+)
dclre1c dclre1c,LOC106595997 coding downstream 354931 7089340 ~ 7100004 (+)
lamb1b lamb1,LOC103364103 coding downstream 381553 7115962 ~ 7144005 (+)
LOC120553621 NA non-coding upstream 218048 6429094 ~ 6501060 (+)
LOC120553126 NA non-coding upstream 429209 6183044 ~ 6289899 (+)
G226097 NA non-coding upstream 621200 6097678 ~ 6097908 (+)
G226085 NA non-coding upstream 799694 5919094 ~ 5919414 (+)
G226042 NA non-coding upstream 942675 5750128 ~ 5776433 (+)
G226292 eri1,LOC102785739 non-coding downstream 423081 7157490 ~ 7157887 (+)
G226306 ndufa12 non-coding downstream 478983 7213392 ~ 7216386 (+)
G226316 NA non-coding downstream 533100 7267509 ~ 7268758 (+)
G226317 NA non-coding downstream 534695 7269104 ~ 7270753 (+)
G226318 NA non-coding downstream 536908 7271317 ~ 7271707 (+)
prkcq prkcq,LOC102789446 other upstream 32469 6660520 ~ 6686639 (+)
abcc9 abcc9,LOC107387088 other upstream 1345471 5281258 ~ 5373637 (+)
G225894 NA other upstream 2061139 4657444 ~ 4657969 (+)
LOC120553793 NA other upstream 2780154 3935674 ~ 3938954 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other upstream 2877934 3814481 ~ 3841174 (+)
snrpf snrpf,LOC106576293 other downstream 584108 7318517 ~ 7321189 (+)
amdhd1 amdhd1 other downstream 588661 7323070 ~ 7332259 (+)
klhl42 klhl42 other downstream 628916 7363325 ~ 7368216 (+)
nrip2 LOC102781986,LOC100711207,LOC102191975 other downstream 636033 7370442 ~ 7400399 (+)
ascl1a ascl1 other downstream 689209 7423618 ~ 7426254 (+)

Expression


Co-expression Network