camk1da (camk1d)


Basic Information

Item Value
gene id camk1da
gene name camk1d
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 20455675 ~ 20530744 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791833.1
gagagagagagagagaaggaggagggagccACTGAGGCAGCAGGGACACGGGAACCTGCAGGAGGACTCACAtggtcctgcagcagaggagcacaGACCACCGGGACACTCCAAACCTCTTAACGTCACATTCAGTTCGGCTTAGtctactttcttttcttttcttttttccagatAACGTGAACGTTACTCCTCCGTTTTTATTCCATTTGCTTCTCGCATCCCTCCTCCCGCAGCCCAGTGTCGGTCGGACTTGGGCCGGTAAAAGCAGCGCCATGGCTCGGGAGAACGGAGACACCGGCAGAGGGGAGACGTGGAAAAAACAAGTCGACGACATCAAGAAATTTTTTGATTTTAAAGAAGTCCTCGGCACAGGAGCGTTTTCCGAGGTGGTCCTGGCCCAGGAGAAGCTGACCGGACGGATGTTTGCGGTGAAGTGCATCCCTAAGAAGGCTCTGAAGGGGAAGGAGAGCAGCATCGAGAACGAGATCGCCGTGCTGAGGAAGATCAAGCACGAGAACATTGTGGCGCTGGAGGACATCCACGAGAGCCCTGACCACCTCTACCTGATCATGCAGCTGGTGTCTGGCGGAGAGCTGTTTGACCGAATCGTGGAAAAAGGTTTCTACACGGAGAAGGATGCGAGCACGCTGATCCGACAAGTCCTGGATGCTGTGAACTACCTGCACAAGATGGGCATTGTACACCGAGATCTGAAGCCAGAGAACTTGCTGTATTTCAATCCCCAAGACGAGTCAAAGATCATGATCAGCGACTTTGGTCTTTCCAAGATGGAGGGCAGCGGTGATGTCATGTCCACTGCCTGCGGCACGCCGGGATATGTGGctcCAGAGGTTCTTGCCCAGAAGCCGTACAGTAAGGCGGTGGACTGCTGGTCCATTGGAGTGATCGCCTACATCCTGCTGTGTGGTTACCCTCCGTTCTACGATGAAAACGACTCTAAGCTGTTCGAACAGATCCTGAAAGCCGACTACGAGTTTGACGCACCCTACTGGGACGACATATCAGACTCAGcCAAGGATTTCATTGGCAGTCTGATGGAGAAAGATCCAGCCAAGCGTTTCACCTGCGATCAGGCACTCAGACACCCCTGGATCGCCGGGGATACGGCACTCTGCAAGAACATCCATGAGTCAGTCAGCCGACAGATCAAAAAGAACTTCGCCAAGAGCAAATGGAGGCAAGCGTTCAATGCCACCGCCGTGGTTCGGCACATGAGGCGGCTGCAGcttggcagcagcagcatgggGAGCAGCGTGGACGCCTCCAACCCACCGACCAGGCCGAGCCAGACGCAGAGGCCGgcccagagccagagccagagccaggcGGGCCAGAACCAGCCAGCTCAGAGCCAAAACACCGGCCAGGCGGCGCAGAGCCAGAGCGCCAACACAGCCGCCAGCAAAAGCTCTTCCATAGACAACAACATAGCAGCTCCCCGCAAGGAATGTGCAGCTGCACCGGCCACGCCCTGCAGTCTGGCGTCTGCAGCCTCTTCTCCCGCCGCCGGGGCAGAGCTGAACCGGCCACATCCCTCCGCGCCCGCCGCCCCGGTGCTCACGGAGACCAAGTGACGCCAGGTCCCGCGGGGAACCAGTTGGGAGGCCACGGCGCTGTGAGGCAGAGAGACGGAAAGAGACGGAGGAcgacaggagaggaagaggatccccccccct

Function

symbol description
camk1d Enables calmodulin-dependent protein kinase activity. Involved in several processes, including positive regulation of CREB transcription factor activity; positive regulation of phagocytosis; and positive regulation of respiratory burst. Located in cytoplasm and nucleus.

NR:

description
calcium/calmodulin-dependent protein kinase type 1D-like

GO: NA

KEGG:

id description
K08794 CAMK1; calcium/calmodulin-dependent protein kinase I

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791833.1 True 1700 mRNA 0.58 11 20455675 20530744

Neighbor

gene id symbol gene type direction distance location
optn optn coding downstream 25179 20410195 ~ 20430496 (-)
mcm10 mcm10,LOC102783079 coding downstream 45999 20394066 ~ 20409676 (-)
hcfc2 hcfc2 coding downstream 169088 20272526 ~ 20286587 (-)
cep83 cep83 coding downstream 183531 20260025 ~ 20272144 (-)
LOC120553419 timp3,LOC103152565 coding downstream 455153 19983479 ~ 20000522 (-)
LOC120553073 NA coding upstream 6312 20537056 ~ 20544945 (-)
cdc123 cdc123 coding upstream 19290 20550034 ~ 20564985 (-)
il15ra NA coding upstream 89801 20620545 ~ 20640722 (-)
ano2b ano2,LOC103459666,LOC108245555,LOC102202227 coding upstream 394429 20925173 ~ 21008235 (-)
pik3cg pik3cg coding upstream 491591 21022335 ~ 21046386 (-)
G229079 NA non-coding downstream 5547 20442320 ~ 20450128 (-)
G229076 ccdc3,LOC102778083 non-coding downstream 18139 20434155 ~ 20437536 (-)
G229071 NA non-coding downstream 64167 20382465 ~ 20391508 (-)
G229062 NA non-coding downstream 98112 20355636 ~ 20357563 (-)
G228946 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC106945279 non-coding downstream 549732 19852964 ~ 19905943 (-)
G229095 NA non-coding upstream 4541 20535285 ~ 20535597 (-)
G229096 NA non-coding upstream 5829 20536573 ~ 20536801 (-)
G229098 NA non-coding upstream 10444 20541188 ~ 20542936 (-)
G229099 NA non-coding upstream 16149 20546893 ~ 20547497 (-)
G229109 NA non-coding upstream 18754 20549498 ~ 20549724 (-)
cdk17 LOC104930593 other downstream 101048 20301092 ~ 20354627 (-)
rerg rerg other downstream 333282 20066895 ~ 20122393 (-)
etv6 etv6 other downstream 616325 19806814 ~ 19839350 (-)
G228934 fam19a2,LOC103364248 other downstream 648577 19733102 ~ 19807098 (-)
sox5 sox5 other downstream 1185339 19028609 ~ 19270336 (-)
G229199 NA other upstream 426913 20957657 ~ 20958220 (-)
ptprz1b NA other upstream 532947 21063691 ~ 21145533 (-)
slc38a2 slc38a2 other upstream 930332 21461076 ~ 21474602 (-)
LOC120553090 NA other upstream 1240344 21771088 ~ 21811097 (-)
G229716 NA other upstream 2574016 23104760 ~ 23239573 (-)

Expression


Co-expression Network