ttll12 (ttll12)


Basic Information

Item Value
gene id ttll12
gene name ttll12
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 25263996 ~ 25349341 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791862.1
GCTGTCAAACTTCTTCCGGGTGTGCTAAGTCTACCTCCACGTGACTGATATATCTGCTTATAGTAATGTCAACAAACTGTATCATGATAAATGGAGACGGGGACGAGGAGTTCACGGGCTTCGTGGCCCTACACGGCGGGGCCCTGCAGTCCTCAGGACTCCCCCCAATCTACTGGAGGAGCCTCCATCACAAAATCTCGAACGAGATTTATGATGCTGGGGAAGTTTTCGGAATCATGCAGTTTCAACAAGAAGACAACGACGAGGAGGAAACTGGGGGTAacgaggagaggaagagggacaATCGTGTAGCAGTGATGAGCAGTAAAGTGGTTGTGACCCGGGAGAGTGGACTGCAAGCCTCAGAGCCGTCCAGTGTTTTTCTGGTGGATCACGCCTGGACGTACCGCGTGGACCAAAGCCGCCAGCAGCTGGAGCAGATCCCCGGCCTGCTGCACAGAATGGCCGCGCTCATGGGGGTGGACTTCCACGGCGAGGCCCCTGACCCAGACACGGTGGAGCTGGTGATGGAGCACATGTGGAAGTACAACCAGACTTACAAACTCTCCCAGGGGTCTCCAGAGGACAAAGTTCCAGTGTGGTACATCATGGATGAGTTTGGCTCCCAGGTGCAGCACTCTGACCAGCCCAGCTGCGGCATGGCTCCCTTCTTCTACATCCCGGGCATGCTGGCCTACTCTGTGCTCTGGCCTCTGCAGGACCTGCAGGAAGGAGATGAAGTAACCCGTGACTATGCGTATGGAGAGACGGACCCCCTGGTGAGGCGATGCCGTCTGTTACCATGGATACCTGCTGACCTAGAAGGGGTCAGCAGTGTCACCACTGAGCCTCTGGACTCCTACTACGAGGCCATAATATCGGAGATTAAGGAGCAGCTTCCTGTGGAAATCCAACCCTACAGTGTGCCAGAGGACAAAATCCTAAAGGTTTACTCCGACATGTCCCAAGTAACAAACAACCTGACCCATCCACGGTTCCAGCTGACGGAGGACAAAGAGGAGGCTGATGTCATTTGGAGCTATAATCACATCAAAGACTACAGAAAGCTAAGCGAGGAACAACCTCATGTGATGCTGAACCAGTTTCCCTGTGAGAGCGTCATCACTGTGAAGGACTGCATGGCTGCTGTGGCCCGCAGAGTGAAAGGGGGCCCACAACCTGATTGGCTGCCAAAGACCTTCAACCTCCAGTCAGAGCTCCCACAGTTCATCAAGTGTTATCAACTGAGACAACAAAGGGAAGAAGATAACCACTGGATCTGTAAGCCGTGGAACTTGGCCCGTGGACTGGACACACACATTACCAACAACCTAGACTACATAATCAGACAACGAGAGAGTACACCAAAGGTTGTGTGTAAGTACCTTGAAGATCCAGTGCTCTTCAACAGAGAGGAGGTGGGAATGGTGAAGTTTGACATTCGCTACATGCTGATGTTGCGCTCCGTGCAGCCCCTGCGTCTCTATGCCTACAACGTCTTCTGGTTGCGCTTTGCTAATAGACCTTTCTCCTTGGACCGCTTTGATGATTACCAAAAGCACTTCACCGTCATGAACTATGCAGATGGTGTGGAGCTTAAGCAgGTGCACTACGATGAGTTCATCCCCATGTTTGAGAAGCAGTACCCACAGTATCCATGGAAGGAGGTAGAAGCAGAGATATTTTCCGCGTTGAAGGAGTTCTTCCAGGCAGCCTCGTCTCGACCGGCTCCGTATGGTATATGTTCCTACCCATCATCCCGGGCCATCTATGCCGTAGACCTCATGCTGAAGTGGACTACTGGGCAAAATGGTGAGCGAGTGATGCAGCCTCAGATCCTGGAGTTGAACTTCAGCCCTGACTGTGCTAGGGCCTGCCTCTACCACCCCTCCTTCTACAACCATATGTTCCAGACACTGTTCCTGGATGAGCCAGAGCACTGCCCAGTCACACAAATTGTATGATCAACTCAACATCACTGGTCAGTGTGTTTGCAGTTCTGTTTTTTATACAGAGACCTATTCACATACTTTTTTGGTCCCTACATTTCTTCTTCACTTTTACACTCTTTCTCTGTAACTGGTTACCATCTTAACTTGCCAATTGATGTTAATTAAGGGCTTATAAAACTGTTCCCCTCTGTAGCTCAGTTCCTCATAAATCTTAACATCAttgcctttttttcattttaatgaaattattATAAGGTTGTTCTCAAAACTGCTTAGGTTATGAACCCAATGATTAAAACCAACCCATTTCTGTGCAAATGAGAAGCAATAAAAATAGCTTTgaaaaaactggaa
>XM_039791863.1
GCTGTCAAACTTCTTCCGGGTGTGCTAAGTCTACCTCCACGTGACTGATATATCTGCTTATAGTAATGTCAACAAACTGTATCATGATAAATGGAGACGGGGACGAGGAGTTCACGGGCTTCGTGGCCCTACACGGCGGGGCCCTGCAGTCCTCAGGACTCCCCCCAATCTACTGGAGGAGCCTCCATCACAAAATCTCGAACGAGATTTATGATGCTGGGGAAGTTTTCGGAATCATGCAGTTTCAACAAGAAGACAACGACGAGGAGGAAACTGGGGGTAacgaggagaggaagagggacaATCGTGTAGCAGTGATGAGCAGTAAAGTGGTTGTGACCCGGGAGAGTGGACTGCAAGCCTCAGAGCCGTCCAGTGTTTTTCTGGTGGATCACGCCTGGACGTACCGCGTGGACCAAAGCCGCCAGCAGCTGGAGCAGATCCCCGGCCTGCTGCACAGAATGGCCGCGCTCATGGGGGTGGACTTCCACGGCGAGGCCCCTGACCCAGACACGGTGGAGCTGGTGATGGAGCACATGTGGAAGTACAACCAGACTTACAAACTCTCCCAGGGGTCTCCAGAGGACAAAGTTCCAGTGTGGTACATCATGGATGAGTTTGGCTCCCAGGTGCAGCACTCTGACCAGCCCAGCTGCGGCATGGCTCCCTTCTTCTACATCCCGGGCATGCTGGCCTACTCTGTGCTCTGGCCTCTGCAGGACCTGCAGGAAGGAGATGAAGTAACCCGTGACTATGCGTATGGAGAGACGGACCCCCTGGTGAGGCGATGCCGTCTGTTACCATGGATACCTGCTGACCTAGAAGGGGTCAGCAGTGTCACCACTGAGCCTCTGGACTCCTACTACGAGGCCATAATATCGGAGATTAAGGAGCAGCTTCCTGTGGAAATCCAACCCTACAGTGTGCCAGAGGACAAAATCCTAAAGGTTTACTCCGACATGTCCCAAGTAACAAACAACCTGACCCATCCACGGTTCCAGCTGACGGAGGACAAAGAGGAGGCTGATGTCATTTGGAGCTATAATCACATCAAAGACTACAGAAAGCTAAGCGAGGAACAACCTCATGTGATGCTGAACCAGTTTCCCTGTGAGAGCGTCATCACTGTGAAGGACTGCATGGCTGCTGTGGCCCGCAGAGTGAAAGGGGGCCCACAACCTGATTGGCTGCCAAAGACCTTCAACCTCCAGTCAGAGCTCCCACAGTTCATCAAGTGTTATCAACTGAGACAACAAAGGGAAGAAGATAACCACTGGATCTGTAAGCCGTGGAACTTGGCCCGTGGACTGGACACACACATTACCAACAACCTAGACTACATAATCAGACAACGAGAGAGTACACCAAAGGTTGTGTGTAAGTACCTTGAAGATCCAGTGCTCTTCAACAGAGAGGAGGTGGGAATGGTGAAGTTTGACATTCGCTACATGCTGATGTTGCGCTCCGTGCAGCCCCTGCGTCTCTATGCCTACAACGTCTTCTGGTTGCGCTTTGCTAATAGACCTTTCTCCTTGGACCGCTTTGATGATTACCAAAAGCACTTCACCGTCATGAACTATGCAGATGGTGTGGAGCTTAAGCAgGTGCACTACGATGAGTTCATCCCCATGTTTGAGAAGCAGTACCCACAGTATCCATGGAAGGAGGTAGAAGCAGAGATATTTTCCGCGTTGAAGGAGTTCTTCCAGGCAGCCTCGTCTCGACCGGCTCCGTATGGTATATGTTCCTACCCATCATCCCGGGCCATCTATGCCGTAGACCTCATGCTGAAGTGGACTACTGGGCAAAATGGTGAGCGAGTGATGCAGCCTCAGATCCTGGAGTTGAACTTCAGCCCTGACTGTGCTAGGGCCTGCCTCTACCACCCCTCCTTCTACAACCATATGTTCCAGACACTGTTCCTGGATGAGCCAGAGCACTGCCCAGTCACACAAATTGTATGATCAACTCAACATCACTGGCGAGCCACCCTGGGACCTGAGAAGTTGAAGCTGACACCTTTTATCCTGAGGGAGGGATCACCGATCCTTTATTTCGCcaaatttta

Function

symbol description
ttll12 Predicted to enable ATP binding activity. Predicted to act upstream of or within cellular protein modification process. Orthologous to human TTLL12 (tubulin tyrosine ligase like 12).

NR:

description
tubulin--tyrosine ligase-like protein 12 isoform X1

GO:

id name namespace
GO:0006464 cellular protein modification process biological_process

KEGG:

id description
K16609 TTLL12; tubulin--tyrosine ligase-like protein 12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791862.1 True 2306 mRNA 0.50 14 25263996 25347553
XM_039791863.1 False 2068 mRNA 0.52 15 25263996 25349341

Neighbor

gene id symbol gene type direction distance location
LOC120553672 LOC103361951,LOC100711848,LOC101487241 coding upstream 3646 25244537 ~ 25260350 (+)
pnpla3 LOC103361965,LOC104964946 coding upstream 22058 25218540 ~ 25241938 (+)
mpped1 mpped1,LOC103131679,LOC106525904 coding upstream 150803 25011234 ~ 25113193 (+)
scube1 scube1 coding upstream 271831 24869947 ~ 24992165 (+)
LOC120553142 NA coding upstream 428251 24830198 ~ 24835745 (+)
LOC120553526 NA coding downstream 43091 25392432 ~ 25400207 (+)
LOC120553524 dennd5b,LOC102198357 coding downstream 53014 25402355 ~ 25491732 (+)
prl2 LOC104964766,LOC103356682,LOC100697904 coding downstream 197599 25546940 ~ 25553001 (+)
cdnf LOC104964768 coding downstream 219198 25568539 ~ 25574022 (+)
tmbim4 tmbim4 coding downstream 259165 25608506 ~ 25614445 (+)
G230249 NA non-coding upstream 72053 25184812 ~ 25191943 (+)
G230192 NA non-coding upstream 465255 24795953 ~ 24798741 (+)
G230109 NA non-coding upstream 778479 24482310 ~ 24485517 (+)
G230011 NA non-coding upstream 999931 24260059 ~ 24264065 (+)
G229994 NA non-coding upstream 1147875 24112965 ~ 24116121 (+)
G230260 NA non-coding downstream 2536 25351877 ~ 25352174 (+)
G230259 NA non-coding downstream 27006 25376347 ~ 25377601 (+)
G230327 NA non-coding downstream 86810 25436151 ~ 25494355 (+)
G230336 NA non-coding downstream 145807 25495148 ~ 25495399 (+)
G230337 NA non-coding downstream 150506 25499847 ~ 25500209 (+)
G230148 LOC102781993,LOC101465723 other upstream 485738 24620812 ~ 24778258 (+)
LOC120553083 NA other upstream 949289 24309542 ~ 24314707 (+)
LOC120553686 LOC105929833,LOC107382334 other upstream 1318356 23934300 ~ 23945640 (+)
adm2a NA other upstream 1415372 23833018 ~ 23848624 (+)
kcnc2 kcnc2,LOC100689973,LOC101475944 other upstream 1823333 23315421 ~ 23440663 (+)
LOC120553523 NA other downstream 13541 25362882 ~ 25373996 (+)
msrb3 msrb3 other downstream 292499 25641840 ~ 25662819 (+)
LOC120553706 NA other downstream 461066 25810407 ~ 25812828 (+)
arhgef39 arhgef39 other downstream 688847 26038188 ~ 26106823 (+)
mrps33 mrps33,LOC106591474 other downstream 1023373 26372714 ~ 26381109 (+)

Expression


Co-expression Network