LOC120553461



Basic Information


Item Value
gene id LOC120553461
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 14750780 ~ 14754250 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039791871.1
AAAACCTGTGACTTCTCAATGCTGAAACAAATTCGCCAAACTGACGACACTGCACCCGACCTTAGCAGTCTTTTCATCATATGAACCTTCAAATAACTGTGAAGATGATCCTTGTTATGTTCCTTCTGTGTTCAGGATTATCTGACTTTACATTTGGATCAAACCGTCTACGAGTTTTCCGTTTTCCTGATAATGAAAATGAACCAGATTGGGATGGTGCATTGAGTGAATGCAATAAGGCAAATGAATCATTTGTAACTTTGTACGATGAAGAGGATGCCAATTTCGTGGCCAACTTCTCGGATGGTAAACAAAGGCTCTGGCTTGGTCTGCGTAAAGGACGAAATATCACTTGGTCAGACGGTGTCCCTGTCACATTCAATGCTACATATGAGATTGAAAAAGCAGGGACTCAGATATGCGTGGCTATTGACAACAACACGTGGACAAGTTTGAATTGTTCAGAGAGAAAACCTTTCATGTGCAACAAGGATGGTAATTACACACTGTATGAAGACGAGAAGAACTGGTGTAAAGCTCTGCAATACTGCAGACATTTCTCGGCTGACTTGGTCAGCATCAGTAATGAGTCGCAAAATGATGAAGTGATTAAAAAGGGAAACAACACAAGCTTTTGGATTGGACTAATGCATGATGAATGGGAGTGGGCGGACAAAAGTTGCTCTTTATACAGGAATTGGGATACTGAGTCGGCTCTTTTAGATCCCATAGAAAAATGCACAATTTCAACGGCTCTAGGATTACTGAAGAACCAGGAATGTCCGAATTCTCAAGCATTCTCCTTTTGCTCCAAAGGTAAAACGAGAATCAGAGTCATCGATCACCATTTAACTTGGGAACGGGCCTTTGACTACTGCAAGGCTAACCACACAGGCATGCTTCAGATTGAGAATGAGAATGATCAGAAGGCTGTTGAACAATGGCTAAATAACACTGATGTTACTGGTCCGTTCTGGATTGGTCTGAGGCAGAGTCGTGTCTTTGGATTCTGGATTTGGAGAGACAGGACAGTGACCTACAGCAAGTGGAAGAATGGCACGGAGCCTAAGCTGCCCATGTCTAACCACTGCGGTGCCATCAACCAGACGGAGTGGAGTGATGAACACTGTTGGCGTAGGCTACCTTTTCTTTGTGAGGAGAAGATTATATTCATGAATTAATCAGTGAGGGGTTGATGCCTGAGCATGTAGATGAAAGTCAGCAACATAACCCTTAACATTTTCCTTTACTACTCTGACTCTTAATGGAAGTCTTTCTTGAATTCAGTTGGTACAAAATAAtctgacattttttgttgtAACATGAAATTATAGACTGACAAGATTGATATTTTATTTGACAGTGTTTACTGTATGATTATTATCAGTCACGTACTCATCACTCAGTGATTAATATCATTATTACTATTATCAttaattgttaaaaaaagaatatatggtggaaattatttctttcttttttggggTTCTTCTGTTGATTTCTGTAGTTACTCCAATCAATCCAATCAATATTTTCAGATCAATGAAGGTTTGTATGAGTGTTTGCATGTGATTCCACTAGGACCACTGTTCCACACATTTGCTTTTTCAGTCTTTGAGTAAAAGGTGTGGTATGGTGCAGTGTAGGACAGCACATATAATCTAGATGTAGATCTAAAGAAGATTGTAAGAGAATGTTTGCTGTGTGCATTACACTTCTTTGAGACTACAACCCTTACATCTGAGCTTTGTTGATAAAATGTCTGATTCATTTCTAGATAAGTTGCTTGTTTGCAATAAAAGACTATGCATTTCAAATCCAACCATTGGGGATCTTA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039791871.1 True 1837 mRNA 0.39 5 14750780 14754250
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Neighbor


gene id symbol gene type direction distance location
lmod2b lmod2 coding upstream 329821 14413543 ~ 14420959 (+)
asb15b LOC103373124 coding upstream 337765 14397723 ~ 14413015 (+)
ints13 asun coding upstream 376126 14367920 ~ 14374654 (+)
LOC120553477 NA coding upstream 583184 14160077 ~ 14167596 (+)
LOC120553478 NA coding upstream 590792 14144781 ~ 14159988 (+)
fgl2a fgl2 coding downstream 491908 15246158 ~ 15256323 (+)
LOC120553796 LOC104934096,LOC103355199 coding downstream 584589 15338839 ~ 15345725 (+)
pus7l pus7l coding downstream 606679 15360929 ~ 15368119 (+)
zcrb1 zcrb1 coding downstream 737033 15491283 ~ 15493423 (+)
gxylt1b gxylt1,LOC103355206,LOC103459445 coding downstream 757599 15511849 ~ 15521235 (+)
LOC120553441 NA non-coding upstream 203353 14500801 ~ 14547427 (+)
G227935 NA non-coding upstream 229020 14521104 ~ 14521760 (+)
G227896 NA non-coding upstream 322194 14428185 ~ 14428586 (+)
G227895 NA non-coding upstream 323452 14427101 ~ 14427328 (+)
G227875 NA non-coding upstream 372086 14376864 ~ 14378694 (+)
G227948 NA non-coding downstream 15727 14769977 ~ 14770247 (+)
G227949 NA non-coding downstream 20063 14774313 ~ 14774820 (+)
G227950 NA non-coding downstream 39531 14793781 ~ 14796104 (+)
G227970 NA non-coding downstream 300455 15054705 ~ 15057478 (+)
G227972 znf800,LOC102791911 non-coding downstream 305754 15060004 ~ 15060834 (+)
LOC120553353 spam1,LOC103370765,LOC102199515,LOC101470336,LOC102310263 other upstream 288306 14454593 ~ 14462474 (+)
LOC120553485 tmem60,LOC101486292,LOC104924613,LOC103382814,LOC100699021 other upstream 745875 14002132 ~ 14004905 (+)
trnal-caa_22 NA other upstream 948577 13802093 ~ 13802203 (+)
trnal-caa_21 NA other upstream 949020 13801648 ~ 13801760 (+)
trnak-cuu_12 NA other upstream 975721 13774987 ~ 13775059 (+)
LOC120553256 gsap,LOC102790605 other downstream 414354 15168604 ~ 15203041 (+)
lrrc17 LOC103355197,LOC103382847 other downstream 546272 15300522 ~ 15331178 (+)
prickle1b prickle1 other downstream 687735 15441985 ~ 15471887 (+)
yaf2 yaf2,LOC102236902 other downstream 740427 15494677 ~ 15511178 (+)
tmem168a LOC103368481 other downstream 1512886 16267136 ~ 16280061 (+)

Expression


LOC120553461 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 25.
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LOC120553461 Expression in each Bioproject

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LOC120553461 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 25.
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Co-expression Network