fam3c (fam3c,LOC103355174)


Basic Information

Item Value
gene id fam3c
gene name fam3c,LOC103355174
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 10910337 ~ 10916577 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791983.1
CGCCCTCTAACCATCTCAGCTCAGCTGTCATTACACGAATGTTGTCAGTGTAGGGCTTCGGGAATCAGACCGAGGGTTTCGTGGTTACCGTGGCAATTGAACAGGTTGTTAGTTGTGGTTCAACTGGCTGGAGGCGAAGATGGTCAGGGCTGGCGGTGTTTTGAAGTTTGCAGCGCTTATCTTTGCATTCCTCCTAGCAGTCTTTCTGGCTTTTCAGCTGCTAGAGATCAACCTCGACTTCAAACTGAGCAGTGTGATTTCAAGATCTATGCCAGTGAATGAAGGCTCAGCAAAGCCAGTCAGGTACAAGTGTGGGCTGTCCAAGTCATGTCCTCTTGGACACTTTGCCTTCAAGATGACGAGTGGCGCGGCCAGTGTGGTGGGGCCCAGAATCTGTCTGGAGGACAAATTACTAATGAGCGGTGTGAAGAACAACGTGGGGAGAGGAATCAACATTGCCCTGGTTGATGGGAGAACAGGGGATGCTATTAAGACTGAGTTTTTTGATATGTGGGCAGGAGATGTGGCTCCCTTCATTAAATTCCTGAAGGAAATTGATGAAGGGACAGTCGTGATGATGGCGTCATTTGATGATCCCTCAACAAAACTCAATGATGAAGCCAGGAAGCTAATTGCTGATCTGGGTAGCTCAGCTGTCAGTAATTTGGGTTTCCGCGATAACTGGATCTTTGTCGGAGGGAAAGGCATCAAGACCAAGAGTCCGTTTGAGCAGCATATAAAGAACAGTGCAGACACTAACAAATTTGAGGGATGGCCCGAGGTGTTGGAGATGGAAGGCTGCGTGCCTCAGAGGCAGGACTGAGAAGCGTCATTTTTTACAGCTCTCAAGCATGTTATTTTACCGACCAGAACCAAATCTCTCCAGAAGATATTAGAAGAAAAGAGAAGCCACTGTGCCCTGAGCAGGAACGTGAAACTTGGACCTTCTCCCTCTCACTTCTTCTGTTTGGATACCATTATGTAGATGCCCATTGGGGCTTGTTGGGAAGTAGTAGAGTATACTGATTAAAGGGGGCTTACCTTTGATTATTGGCATACTGTCTCGCTTTCCATCGGTGAGGCTCACAGACTTAGCAGTGATAGAGCGTTGCATTATTGAACTGTTGCTGATGGGAATGGATGTCATAGCCCAGattctttgggggggggggctaagTTTCCATTACCTGCTACCTGCCTTAATCTCATGATCGAATTCCTGGTTTTTAACCAACATGATCTTGTGattccttttttattctttcagAGTTgcgtttatttaaaaaaacaaacaaaaaaaaactactttgtATTAACAGGGTTTGAAGATGCTTCTTGTCATGAAATTATAACCAAATGTACCAAATTCACTGTGAAAtttgtaaatatttgtttttaggGGAGGATTTCAAAGATCCTTATTTAATGAGCAttgtaataattatataatttcttaaaataaatgatattgTTAGTGATGTGTGAGTGGATTAAAAGTGTTTTATTTCTAGCAGTT
>XM_039791984.1
CTCAGCTGTCATTACACGAATGTTGTCAGTGTAGGGCTTCGGGAATCAGACCGAGGGTTTCGTGGTTACCGTGGCAATTGAACAGACCGCGGAGCCACATCGTTCAAATTGACAAATTGTTTTAACACCACAGGTTGTTAGTTGTGGTTCAACTGGCTGGAGGCGAAGATGGTCAGGGCTGGCGGTGTTTTGAAGTTTGCAGCGCTTATCTTTGCATTCCTCCTAGCAGTCTTTCTGGCTTTTCAGCTGCTAGAGATCAACCTCGACTTCAAACTGAGCAGTGTGATTTCAAGATCTATGCCAGTGAATGAAGGCTCAGCAAAGCCAGTCAGGTACAAGTGTGGGCTGTCCAAGTCATGTCCTCTTGGACACTTTGCCTTCAAGATGACGAGTGGCGCGGCCAGTGTGGTGGGGCCCAGAATCTGTCTGGAGGACAAATTACTAATGAGCGGTGTGAAGAACAACGTGGGGAGAGGAATCAACATTGCCCTGGTTGATGGGAGAACAGGGGATGCTATTAAGACTGAGTTTTTTGATATGTGGGCAGGAGATGTGGCTCCCTTCATTAAATTCCTGAAGGAAATTGATGAAGGGACAGTCGTGATGATGGCGTCATTTGATGATCCCTCAACAAAACTCAATGATGAAGCCAGGAAGCTAATTGCTGATCTGGGTAGCTCAGCTGTCAGTAATTTGGGTTTCCGCGATAACTGGATCTTTGTCGGAGGGAAAGGCATCAAGACCAAGAGTCCGTTTGAGCAGCATATAAAGAACAGTGCAGACACTAACAAATTTGAGGGATGGCCCGAGGTGTTGGAGATGGAAGGCTGCGTGCCTCAGAGGCAGGACTGAGAAGCGTCATTTTTTACAGCTCTCAAGCATGTTATTTTACCGACCAGAACCAAATCTCTCCAGAAGATATTAGAAGAAAAGAGAAGCCACTGTGCCCTGAGCAGGAACGTGAAACTTGGACCTTCTCCCTCTCACTTCTTCTGTTTGGATACCATTATGTAGATGCCCATTGGGGCTTGTTGGGAAGTAGTAGAGTATACTGATTAAAGGGGGCTTACCTTTGATTATTGGCATACTGTCTCGCTTTCCATCGGTGAGGCTCACAGACTTAGCAGTGATAGAGCGTTGCATTATTGAACTGTTGCTGATGGGAATGGATGTCATAGCCCAGattctttgggggggggggctaagTTTCCATTACCTGCTACCTGCCTTAATCTCATGATCGAATTCCTGGTTTTTAACCAACATGATCTTGTGattccttttttattctttcagAGTTgcgtttatttaaaaaaacaaacaaaaaaaaactactttgtATTAACAGGGTTTGAAGATGCTTCTTGTCATGAAATTATAACCAAATGTACCAAATTCACTGTGAAAtttgtaaatatttgtttttaggGGAGGATTTCAAAGATCCTTATTTAATGAGCAttgtaataattatataatttcttaaaataaatgatattgTTAGTGATGTGTGAGTGGATTAAAAGTGTTTTATTTCTAGCAGTT
>XM_039791985.1
CTCAGCTCAGCTGTCATTACACGAATGTTGTCAGTGTAGGGCTTCGGGAATCAGACCGAGGGTTTCGTGGTTACCGTGGCAATTGAACAGGTAACGTTAAGCAAGACCGCGGAGCCACATCGTTCAAATTGACAAATTGTTTTAACACCACAGGTTGTTAGTTGTGGTTCAACTGGCTGGAGGCGAAGATGGTCAGGGCTGGCGGTGTTTTGAAGTTTGCAGCGCTTATCTTTGCATTCCTCCTAGCAGTCTTTCTGGCTTTTCAGCTGCTAGAGATCAACCTCGACTTCAAACTGAGCAGTGTGATTTCAAGATCTATGCCAGTGAATGAAGGCTCAGCAAAGCCAGTCAGGTACAAGTGTGGGCTGTCCAAGTCATGTCCTCTTGGACACTTTGCCTTCAAGATGACGAGTGGCGCGGCCAGTGTGGTGGGGCCCAGAATCTGTCTGGAGGACAAATTACTAATGAGCGGTGTGAAGAACAACGTGGGGAGAGGAATCAACATTGCCCTGGTTGATGGGAGAACAGGGGATGCTATTAAGACTGAGTTTTTTGATATGTGGGCAGGAGATGTGGCTCCCTTCATTAAATTCCTGAAGGAAATTGATGAAGGGACAGTCGTGATGATGGCGTCATTTGATGATCCCTCAACAAAACTCAATGATGAAGCCAGGAAGCTAATTGCTGATCTGGGTAGCTCAGCTGTCAGTAATTTGGGTTTCCGCGATAACTGGATCTTTGTCGGAGGGAAAGGCATCAAGACCAAGAGTCCGTTTGAGCAGCATATAAAGAACAGTGCAGACACTAACAAATTTGAGGGATGGCCCGAGGTGTTGGAGATGGAAGGCTGCGTGCCTCAGAGGCAGGACTGAGAAGCGTCATTTTTTACAGCTCTCAAGCATGTTATTTTACCGACCAGAACCAAATCTCTCCAGAAGATATTAGAAGAAAAGAGAAGCCACTGTGCCCTGAGCAGGAACGTGAAACTTGGACCTTCTCCCTCTCACTTCTTCTGTTTGGATACCATTATGTAGATGCCCATTGGGGCTTGTTGGGAAGTAGTAGAGTATACTGATTAAAGGGGGCTTACCTTTGATTATTGGCATACTGTCTCGCTTTCCATCGGTGAGGCTCACAGACTTAGCAGTGATAGAGCGTTGCATTATTGAACTGTTGCTGATGGGAATGGATGTCATAGCCCAGattctttgggggggggggctaagTTTCCATTACCTGCTACCTGCCTTAATCTCATGATCGAATTCCTGGTTTTTAACCAACATGATCTTGTGattccttttttattctttcagAGTTgcgtttatttaaaaaaacaaacaaaaaaaaactactttgtATTAACAGGGTTTGAAGATGCTTCTTGTCATGAAATTATAACCAAATGTACCAAATTCACTGTGAAAtttgtaaatatttgtttttaggGGAGGATTTCAAAGATCCTTATTTAATGAGCAttgtaataattatataatttcttaaaataaatgatattgTTAGTGATGTGTGAGTGGATTAAAAGTGTTTTATTTCTAGCAGTT
>XM_039791986.1
CAGCTCAGCTGTCATTACACGAATGTTGTCAGTGTAGGGCTTCGGGAATCAGACCGAGGGTTTCGTGGTTACCGTGGCAATTGAACAGGTAACGTTAAGCAAGGTTGTTAGTTGTGGTTCAACTGGCTGGAGGCGAAGATGGTCAGGGCTGGCGGTGTTTTGAAGTTTGCAGCGCTTATCTTTGCATTCCTCCTAGCAGTCTTTCTGGCTTTTCAGCTGCTAGAGATCAACCTCGACTTCAAACTGAGCAGTGTGATTTCAAGATCTATGCCAGTGAATGAAGGCTCAGCAAAGCCAGTCAGGTACAAGTGTGGGCTGTCCAAGTCATGTCCTCTTGGACACTTTGCCTTCAAGATGACGAGTGGCGCGGCCAGTGTGGTGGGGCCCAGAATCTGTCTGGAGGACAAATTACTAATGAGCGGTGTGAAGAACAACGTGGGGAGAGGAATCAACATTGCCCTGGTTGATGGGAGAACAGGGGATGCTATTAAGACTGAGTTTTTTGATATGTGGGCAGGAGATGTGGCTCCCTTCATTAAATTCCTGAAGGAAATTGATGAAGGGACAGTCGTGATGATGGCGTCATTTGATGATCCCTCAACAAAACTCAATGATGAAGCCAGGAAGCTAATTGCTGATCTGGGTAGCTCAGCTGTCAGTAATTTGGGTTTCCGCGATAACTGGATCTTTGTCGGAGGGAAAGGCATCAAGACCAAGAGTCCGTTTGAGCAGCATATAAAGAACAGTGCAGACACTAACAAATTTGAGGGATGGCCCGAGGTGTTGGAGATGGAAGGCTGCGTGCCTCAGAGGCAGGACTGAGAAGCGTCATTTTTTACAGCTCTCAAGCATGTTATTTTACCGACCAGAACCAAATCTCTCCAGAAGATATTAGAAGAAAAGAGAAGCCACTGTGCCCTGAGCAGGAACGTGAAACTTGGACCTTCTCCCTCTCACTTCTTCTGTTTGGATACCATTATGTAGATGCCCATTGGGGCTTGTTGGGAAGTAGTAGAGTATACTGATTAAAGGGGGCTTACCTTTGATTATTGGCATACTGTCTCGCTTTCCATCGGTGAGGCTCACAGACTTAGCAGTGATAGAGCGTTGCATTATTGAACTGTTGCTGATGGGAATGGATGTCATAGCCCAGattctttgggggggggggctaagTTTCCATTACCTGCTACCTGCCTTAATCTCATGATCGAATTCCTGGTTTTTAACCAACATGATCTTGTGattccttttttattctttcagAGTTgcgtttatttaaaaaaacaaacaaaaaaaaactactttgtATTAACAGGGTTTGAAGATGCTTCTTGTCATGAAATTATAACCAAATGTACCAAATTCACTGTGAAAtttgtaaatatttgtttttaggGGAGGATTTCAAAGATCCTTATTTAATGAGCAttgtaataattatataatttcttaaaataaatgatattgTTAGTGATGTGTGAGTGGATTAAAAGTGTTTTATTTCTAGCAGTT
>XM_039791987.1
CTCTAACCATCTCAGCTCAGCTGTCATTACACGAATGTTGTCAGTGTAGGGCTTCGGGAATCAGACCGAGGGTTTCGTGGTTACCGTGGCAATTGAACAGGTTGTTAGTTGTGGTTCAACTGGCTGGAGGCGAAGATGGTCAGGGCTGGCGGTGTTTTGAAGTTTGCAGCGCTTATCTTTGCATTCCTCCTAGCAGTCTTTCTGGCTTTTCAGCTGCTAGAGATCAACCTCGACTTCAAACTGAGCAGTGTGATTTCAAGATCTATGCCAGTGAATGAAGGCTCAAAGCCAGTCAGGTACAAGTGTGGGCTGTCCAAGTCATGTCCTCTTGGACACTTTGCCTTCAAGATGACGAGTGGCGCGGCCAGTGTGGTGGGGCCCAGAATCTGTCTGGAGGACAAATTACTAATGAGCGGTGTGAAGAACAACGTGGGGAGAGGAATCAACATTGCCCTGGTTGATGGGAGAACAGGGGATGCTATTAAGACTGAGTTTTTTGATATGTGGGCAGGAGATGTGGCTCCCTTCATTAAATTCCTGAAGGAAATTGATGAAGGGACAGTCGTGATGATGGCGTCATTTGATGATCCCTCAACAAAACTCAATGATGAAGCCAGGAAGCTAATTGCTGATCTGGGTAGCTCAGCTGTCAGTAATTTGGGTTTCCGCGATAACTGGATCTTTGTCGGAGGGAAAGGCATCAAGACCAAGAGTCCGTTTGAGCAGCATATAAAGAACAGTGCAGACACTAACAAATTTGAGGGATGGCCCGAGGTGTTGGAGATGGAAGGCTGCGTGCCTCAGAGGCAGGACTGAGAAGCGTCATTTTTTACAGCTCTCAAGCATGTTATTTTACCGACCAGAACCAAATCTCTCCAGAAGATATTAGAAGAAAAGAGAAGCCACTGTGCCCTGAGCAGGAACGTGAAACTTGGACCTTCTCCCTCTCACTTCTTCTGTTTGGATACCATTATGTAGATGCCCATTGGGGCTTGTTGGGAAGTAGTAGAGTATACTGATTAAAGGGGGCTTACCTTTGATTATTGGCATACTGTCTCGCTTTCCATCGGTGAGGCTCACAGACTTAGCAGTGATAGAGCGTTGCATTATTGAACTGTTGCTGATGGGAATGGATGTCATAGCCCAGattctttgggggggggggctaagTTTCCATTACCTGCTACCTGCCTTAATCTCATGATCGAATTCCTGGTTTTTAACCAACATGATCTTGTGattccttttttattctttcagAGTTgcgtttatttaaaaaaacaaacaaaaaaaaactactttgtATTAACAGGGTTTGAAGATGCTTCTTGTCATGAAATTATAACCAAATGTACCAAATTCACTGTGAAAtttgtaaatatttgtttttaggGGAGGATTTCAAAGATCCTTATTTAATGAGCAttgtaataattatataatttcttaaaataaatgatattgTTAGTGATGTGTGAGTGGATTAAAAGTGTTTTATTTCTAGCAGTT

Function

symbol description
fam3c Predicted to act upstream of or within negative regulation of gluconeogenesis. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in EVL; axial chorda mesoderm; notochord; periderm; and somite. Orthologous to human FAM3C (FAM3 metabolism regulating signaling molecule C).

NR:

description
PREDICTED: protein FAM3C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791983.1 False 1516 mRNA 0.44 10 10910337 10916577
XM_039791984.1 False 1545 mRNA 0.43 10 10910337 10916558
XM_039791985.1 True 1565 mRNA 0.43 10 10910337 10916563
XM_039791986.1 False 1515 mRNA 0.43 10 10910337 10916561
XM_039791987.1 False 1509 mRNA 0.43 10 10910337 10916573

Neighbor

gene id symbol gene type direction distance location
btg1 btg1 coding downstream 58526 10842572 ~ 10851811 (-)
LOC120553735 LOC103355188,LOC104967726,LOC103399077 coding downstream 133465 10772256 ~ 10776872 (-)
dcn dcn,LOC103382665 coding downstream 164546 10725365 ~ 10745791 (-)
lum lum coding downstream 198157 10707687 ~ 10712180 (-)
kera kera,LOC103355179 coding downstream 207175 10696480 ~ 10703162 (-)
si:dkey-159a18.1 LOC104968091,LOC103355173 coding upstream 125 10916702 ~ 10932643 (-)
LOC120553011 LOC104968093,LOC103355170 coding upstream 70433 10987010 ~ 11010105 (-)
snd1 snd1 coding upstream 353417 11269994 ~ 11448442 (-)
cacna2d1a LOC103382776 coding upstream 587041 11503618 ~ 11604688 (-)
LOC120553596 LOC104928793,LOC103358497,LOC104955051,LOC101485526 coding upstream 772550 11689127 ~ 11722935 (-)
LOC120553135 NA non-coding downstream 249838 10639747 ~ 10660499 (-)
G227127 NA non-coding downstream 251410 10602594 ~ 10658927 (-)
G227089 NA non-coding downstream 371921 10538204 ~ 10538416 (-)
LOC120553506 NA non-coding downstream 372500 10509731 ~ 10537837 (-)
G227021 pacsin2,LOC102778832 non-coding downstream 684440 10223494 ~ 10225897 (-)
LOC120553801 NA non-coding upstream 23801 10940378 ~ 10942825 (-)
G227190 LOC104968094 non-coding upstream 32081 10948658 ~ 10949164 (-)
LOC120553014 samd3,LOC101476819 non-coding upstream 43783 10960360 ~ 10975333 (-)
G227211 NA non-coding upstream 106831 11023408 ~ 11023880 (-)
G227215 NA non-coding upstream 113267 11029844 ~ 11031005 (-)
G227082 anks1b other downstream 387375 10513494 ~ 10522962 (-)
dram1 dram1 other downstream 2095897 8809393 ~ 8814440 (-)
ppfia2 ppfia2 other downstream 2116427 8565242 ~ 8793910 (-)
G226495 LOC103356655,LOC105934024 other downstream 3019026 7888571 ~ 7891311 (-)
LOC120553151 LOC107386793,LOC104950937 other downstream 3416030 7422165 ~ 7494307 (-)
G227197 LOC102293685,LOC104918784,LOC102194436 other upstream 63621 10980198 ~ 10981259 (-)
hgfa LOC103365344,LOC104958230 other upstream 542004 11458581 ~ 11482578 (-)
pcloa pclo,LOC107085986,LOC103358500,LOC102794373,LOC108235068,LOC106514760 other upstream 700778 11617355 ~ 11676832 (-)
cracr2ab LOC102301749,LOC103365394 other upstream 920671 11837248 ~ 11848941 (-)
G227429 LOC104958361,LOC103370548 other upstream 1368349 12284926 ~ 12288154 (-)

Expression


Co-expression Network