LOC120553502


Basic Information

Item Value
gene id LOC120553502
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 10263985 ~ 10264705 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039791995.1
TGACCCAGACATATGTCACGCTTGAGCAAAACCTCGGTGCCATGATGCAGAAAATGGCCACCGTCGAAGTCTACTTGGAGTCCTACAAAAGCCAGGTAGAGGAGCTCCGGAAGATAAACCAGGCTCAGGACGAGCAGCTGAAGCAACTCGCAGACGTCACATCTGTGAGCATGTCGAAGATGGCTTTCACCGCTGCTTTAGGAAGCTCGATTGGTCCGTTTGAACAAGACACACCACTGCAATATCAAAGAATCCTCTCCAACATCGGCGGTGGCTACAACCCCGCCACGGGCATCTTCACCGCCATGGTCCGGGGGATGTACTACTTCAGCTATACCATGTACAACAACAACTCCGGACAGCCCAACTCAGTGGTGTCCCTGATGATGAACAGCCAAAGGATGGTGTCAACCTGGGACACTGTGGGCGACGATAGCCACGACAGTGCGACCAACGCAGCCGTGGTGCAGCTGGAGGCTGGAGACAGCGTGTTTGTGAATCTCTACGCAAACAGAGTGCTCTACGACGACGGCTATTATTACAACACCTTCAGCGGCTTCCTGCTCTTCACCTTGTGATGAAACGCGTCATTTAACATGTGATGGACAATAAGTAAATTACGCAGGGGTACAGGTTGTTAATTGGTTCTAttataatataaaacacaaatagttttttattttttgtaaacttGTGGTACTTATTCGTAAGATTCAATGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039791995.1 True 721 mRNA 0.49 1 10263985 10264705

Neighbor

gene id symbol gene type direction distance location
ckap4 NA coding downstream 16720 10242672 ~ 10247265 (-)
trnay-gua_61 NA coding downstream 67552 10196347 ~ 10196433 (-)
trnay-gua_60 NA coding downstream 68115 10195784 ~ 10195870 (-)
bik NA coding downstream 77012 10183285 ~ 10186973 (-)
si:ch73-352p4.8 LOC105937590,LOC104962836,LOC107085821,LOC102237094,LOC103140239,LOC107386545,LOC103459124 coding downstream 110831 10147639 ~ 10153154 (-)
apaf1 apaf1 coding upstream 299725 10564430 ~ 10623168 (-)
tcp11l2 tcp11l2,LOC102777109 coding upstream 359315 10624020 ~ 10632377 (-)
LOC120553733 NA coding upstream 370043 10634748 ~ 10635920 (-)
si:ch211-244b2.3 NA coding upstream 396215 10660920 ~ 10665486 (-)
si:ch211-244b2.4 NA coding upstream 401797 10666502 ~ 10671184 (-)
G227021 pacsin2,LOC102778832 non-coding downstream 38088 10223494 ~ 10225897 (-)
G227019 NA non-coding downstream 43535 10218086 ~ 10220450 (-)
G226917 NA non-coding downstream 521425 9742004 ~ 9742560 (-)
G226803 LOC103358093,LOC102788764 non-coding downstream 1144014 9116810 ~ 9119971 (-)
G226800 NA non-coding downstream 1224128 9037771 ~ 9039857 (-)
LOC120553506 NA non-coding upstream 245026 10509731 ~ 10537837 (-)
G227089 NA non-coding upstream 273499 10538204 ~ 10538416 (-)
G227127 NA non-coding upstream 337889 10602594 ~ 10658927 (-)
LOC120553135 NA non-coding upstream 375042 10639747 ~ 10660499 (-)
LOC120553801 NA non-coding upstream 675673 10940378 ~ 10942825 (-)
dram1 dram1 other downstream 1449545 8809393 ~ 8814440 (-)
ppfia2 ppfia2 other downstream 1470075 8565242 ~ 8793910 (-)
G226495 LOC103356655,LOC105934024 other downstream 2372674 7888571 ~ 7891311 (-)
LOC120553151 LOC107386793,LOC104950937 other downstream 2769678 7422165 ~ 7494307 (-)
usp44 usp44,LOC102783730 other downstream 2985661 7269037 ~ 7278324 (-)
G227082 anks1b other upstream 248789 10513494 ~ 10522962 (-)
G227197 LOC102293685,LOC104918784,LOC102194436 other upstream 715493 10980198 ~ 10981259 (-)
hgfa LOC103365344,LOC104958230 other upstream 1193876 11458581 ~ 11482578 (-)
pcloa pclo,LOC107085986,LOC103358500,LOC102794373,LOC108235068,LOC106514760 other upstream 1352650 11617355 ~ 11676832 (-)
cracr2ab LOC102301749,LOC103365394 other upstream 1572543 11837248 ~ 11848941 (-)

Expression


Co-expression Network