LOC120553521


Basic Information

Item Value
gene id LOC120553521
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 27224262 ~ 27231391 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792036.1
taaatgcaaaaatgttatttggcaagtcaCCGTGGTATAAGCAGCAttggacggttcacgcctcttCCATCCTCCATTAATTCCTGAAAATGGACACCTCCTCGAGAATTAACCCTTACTTATTTACTGTTAACAGTGCATATACAAGCAGCTGGATTAATGACTGCTTTTTCTAGTTTTATCAGTCTTTTTAATGCCCTGCACAGATCGAGAGGCGTCAGCAACCGGTGGAGGGAGGTGTTGATGAAGACCCATCAACCTGCCCCTGCCTGATGAGCTGCACCATCTTCCTCGGTTACACCTCAAACCTCATCAGCAGCGGACTCAGGGAGACTATCCGCTACCTCGCAGAACACAAAATGGTGGGTGTCTTAGTGACCACAGCTGGAGGTATAGAAGAGGATCTGATGAAGTGTTTCAGCCCGGCTTACATTGGAGACTTTACTATGTCTGGCAAGGATCTGTACGAAAAAGGTCATAACATGGCTGGAAACACTCTGATCCCCCAAGAAAACTATGTCAAGTTTAACAAATGGATGCCTCCGATCTTGAAGCAGATGCTGCTGAAGCAGAACACTCTGGGCGTTTGCTGGACTCCATCTAAGATGATCCATCGGCTGGGCAAGGAGATCAACAACCCTGAATCTGTTTACTACTGGGCCTACAAGAATAACATGCCGGTGTTCTGCCCTGCCCTGACAGACGGCGCTATAGGAGAcgagctctttgtcttctcaGCTGAAAACCCGGGCTTAAAACTGGACATAGTTGAAGATATTTCAAAGTTGAACAGCCTCGCAATTGCTGCCAACAGCACAGGGATGATCATCCTGGGAGGAGGTGTAGCCAAACACCAAGTATGCAATGCCAATTTCTGGAGGAATGGAGCCGACTACGCAGTGTATGTGAACACGGCTCAGGAGTTTGATGGTTCTGACTCAGGGGGCAGTCCTGATGAGGCCATGTCCTGGGGAAAGATCAAAGTAGATGCTAAACCTGTGAAGGTGTGTGCAGATGCTTCCATCGTTTTCCCCCTATTGGTGGCAGAGACCTTTGCAGTCCATGCTAATAAGAAGACAGCTGGCAAGGAAAACAGATAAACAAATTGTTGGTCTGGAATACAAAGCTTCAGATGGAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792036.1 True 1140 mRNA 0.47 8 27224262 27231391

Neighbor

gene id symbol gene type direction distance location
gpr22a gpr22,LOC103362561,LOC104950263 coding upstream 77471 27138046 ~ 27146791 (+)
ndufa5 ndufa5 coding upstream 172980 27046066 ~ 27051282 (+)
aebp2 LOC103362558,LOC104950851 coding upstream 179845 27019362 ~ 27044417 (+)
braf braf coding upstream 797218 26386815 ~ 26427044 (+)
cnot4b NA coding upstream 970327 26222789 ~ 26253935 (+)
LOC120553763 NA coding downstream 22025 27253416 ~ 27272215 (+)
golt1ba golt1b,LOC101473753,LOC106532178,LOC103459552,LOC106907182,LOC105929813,LOC102297447 coding downstream 405697 27637088 ~ 27644879 (+)
spx spx coding downstream 416612 27648003 ~ 27651082 (+)
kiss2 NA coding downstream 464233 27695624 ~ 27696717 (+)
LOC120553234 LOC104948514,LOC103363512 coding downstream 618346 27849737 ~ 27959398 (+)
G230685 NA non-coding upstream 107368 27115926 ~ 27116894 (+)
G230658 NA non-coding upstream 343275 26880507 ~ 26880987 (+)
G230645 NA non-coding upstream 543164 26680864 ~ 26681098 (+)
G230635 NA non-coding upstream 610090 26613952 ~ 26614172 (+)
G230600 NA non-coding upstream 792140 26428434 ~ 26432122 (+)
G230746 NA non-coding downstream 1003 27232394 ~ 27233038 (+)
G230773 NA non-coding downstream 51108 27282499 ~ 27282919 (+)
G230774 NA non-coding downstream 51562 27282953 ~ 27283275 (+)
G230783 NA non-coding downstream 239697 27471088 ~ 27472678 (+)
G230786 NA non-coding downstream 253326 27484717 ~ 27484946 (+)
LOC120553194 NA other upstream 151710 27069077 ~ 27072552 (+)
LOC120553759 NA other upstream 252409 26693356 ~ 26971853 (+)
mrps33 mrps33,LOC106591474 other upstream 843153 26372714 ~ 26381109 (+)
arhgef39 arhgef39 other upstream 1117439 26038188 ~ 26106823 (+)
LOC120553706 NA other upstream 1411434 25810407 ~ 25812828 (+)
G230842 NA other downstream 371614 27603005 ~ 27603702 (+)
G230904 NA other downstream 709930 27941321 ~ 27947473 (+)
G230975 NA other downstream 826340 28057731 ~ 28058218 (+)
trnat-ugu_41 NA other downstream 1239415 28470806 ~ 28470878 (+)
trnak-uuu_24 NA other downstream 1239715 28471106 ~ 28471178 (+)

Expression


Co-expression Network