LOC120553526


Basic Information

Item Value
gene id LOC120553526
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 25392432 ~ 25400207 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792050.1
TCCAGTTCCCCCCCTGGAGATGCGTCGCTTGGAGAACTATTAGCGGACAGCGCTGCACATCGAAGCCGGGATGAGTGGGAGCTCCGCGGTGTCCGGCGCGGCGCCCTGCCTGTTTGTGGGGTAGACACGGAAACTGGACTGGAACCGGACGAACTAGCAGAATATCCACGAATAATGATGGACGTTGCTGCCACTTGCACAAAGAGTGAAGATGAGAGTCCAGTAGTTCTCACAGCGGTGCCTGAAATGATCTGGGATGACCTGACTGAGAAGCAGCCGAGTTCACCTGATGTCTCGGAGGATCTTCAAACAAAGTCTAGTTCAGTGGCATCGGAAAACAAGATGcaaatacaaaagaaaagaaaaaaattgaagCTCACCAACAGTGTTACCTGGAAGGAAGTAAATCCACATTCCAAGGTAAATTCAGCAGTTGAGAGTATTCAGATTAATAACATAGTATCACTTTTTACAAACCAAATGGGGGATGCAGGTGAAAATGGTCCATTATACCCTAAATGTGACAGTGGTCCTTTCTCTGAAGATgagactgatgatgatgatgatgatgactggTTATTCATACCTATAAGCATATCAGACCTCAAATTTGAATCAGATAATGAAGACCAGGATAGCCCAGACATACATGTGCTAGATGATGGGGAAACAGGAGACCAAGAAAGACAATGTGACACAAGCCCAACACACTGGCCATCTCCGAATCCAGTACCAGCGTCTCATCCTCCCCAGATCGAGACATTTGACACTTTGGCCAGCTTTATGAAACAAGCATTAGGCAGGAGCACACCGAACATGGACTGGACTCTGAGGGAAAACCACAACCAACTAAGAACAGGAGAGAGTCTGTAGACAGCTGTGCAACTGAAGACAGTTGTGATTACTCCTCTGCATTAGGACACAACTATTTGACAGCGTCCAGGTTGAGGTCAGCACCTCTGCTCATAGAGACAGATTCTGAGGGTGAAGGCAATGATGTTACAAATATGCCAACAAGTCCAAACAAGAGCTTGGACAAGTCGGGCATGAAAAGCCTTAGAAAGACCAATGGACAAAACATTCCAAGAAAGGATGACATTATAATCCTTGATTCGGAGGATGAAAGTGACCAAAACTGCAAAAAGAAGGCTGAAACCGAAGGAAGGCCTGAAACTATGGACAGAAAGCGTGGAACTGTTaaagaaaagtttaaaaaaaaacgaccGCTACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792050.1 True 1232 mRNA 0.46 2 25392432 25400207

Neighbor

gene id symbol gene type direction distance location
ttll12 ttll12 coding upstream 43091 25263996 ~ 25349341 (+)
LOC120553672 LOC103361951,LOC100711848,LOC101487241 coding upstream 132082 25244537 ~ 25260350 (+)
pnpla3 LOC103361965,LOC104964946 coding upstream 150494 25218540 ~ 25241938 (+)
mpped1 mpped1,LOC103131679,LOC106525904 coding upstream 279239 25011234 ~ 25113193 (+)
scube1 scube1 coding upstream 400267 24869947 ~ 24992165 (+)
LOC120553524 dennd5b,LOC102198357 coding downstream 2148 25402355 ~ 25491732 (+)
prl2 LOC104964766,LOC103356682,LOC100697904 coding downstream 146733 25546940 ~ 25553001 (+)
cdnf LOC104964768 coding downstream 168332 25568539 ~ 25574022 (+)
tmbim4 tmbim4 coding downstream 208299 25608506 ~ 25614445 (+)
lemd3 lemd3,LOC104964688,LOC106576661 coding downstream 221236 25621443 ~ 25640090 (+)
G230259 NA non-coding upstream 14831 25376347 ~ 25377601 (+)
G230260 NA non-coding upstream 40258 25351877 ~ 25352174 (+)
G230249 NA non-coding upstream 200489 25184812 ~ 25191943 (+)
G230192 NA non-coding upstream 593691 24795953 ~ 24798741 (+)
G230109 NA non-coding upstream 906915 24482310 ~ 24485517 (+)
G230327 NA non-coding downstream 35944 25436151 ~ 25494355 (+)
G230336 NA non-coding downstream 94941 25495148 ~ 25495399 (+)
G230337 NA non-coding downstream 99640 25499847 ~ 25500209 (+)
G230339 NA non-coding downstream 103457 25503664 ~ 25504436 (+)
G230401 NA non-coding downstream 195385 25595592 ~ 25616671 (+)
LOC120553523 NA other upstream 18436 25362882 ~ 25373996 (+)
G230148 LOC102781993,LOC101465723 other upstream 614174 24620812 ~ 24778258 (+)
LOC120553083 NA other upstream 1077725 24309542 ~ 24314707 (+)
LOC120553686 LOC105929833,LOC107382334 other upstream 1446792 23934300 ~ 23945640 (+)
adm2a NA other upstream 1543808 23833018 ~ 23848624 (+)
msrb3 msrb3 other downstream 241633 25641840 ~ 25662819 (+)
LOC120553706 NA other downstream 410200 25810407 ~ 25812828 (+)
arhgef39 arhgef39 other downstream 637981 26038188 ~ 26106823 (+)
mrps33 mrps33,LOC106591474 other downstream 972507 26372714 ~ 26381109 (+)
LOC120553759 NA other downstream 1293149 26693356 ~ 26971853 (+)

Expression


Co-expression Network