tcp11l2 (tcp11l2,LOC102777109)


Basic Information

Item Value
gene id tcp11l2
gene name tcp11l2,LOC102777109
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 10624020 ~ 10632377 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792057.1
TGGTTTCGTCTGTTTGTCCTTAAAGCCAGCTGGGGTAACTAAAGACCTTTAAACAGAGAGCAATTTCACAGGACGACGACGACGAATCTTCTCTTCAGAGTTGAGCTATTTTTGGTATTAGTCTCCTTTTCCGGAGACTTGAATGAGCTATAACCCTAAGATGCCTCTAAATAATGAGCGACCTGCATCCACATCCAGCGGTGAGGATCAAGGCAGCGATGTGGAGTCGTCGTCAGAGCGCTGTGACAGCATGACGTCGACCAGCAACCGTGAGAGCTTCACTAGCGACTGCTCCAGCAAGCATAGCACACCTTCCTCAAGCCCACCCAAAACCTTAACCCTGGATGTAGTCATGGATTCTGCCAGAGACCTGTCCAATCTCAGCCTTGCCCATGAGATGATTGTGAACGGCAACTTCTGTCTGGAGCCGAAAAGCCTGCCTCAGGACAGtttatGGAAGATGGTTAGAGATATTGTCCACAAGGCCTTCTGGGACATCCTGGAGTCGGAGCTGAACGACGACCCACCTGAGTATGGGCAAGCCATCAGATTATTGGAGGAGATCAGAGAGATATTACTGTCATTTCTTAATCCGGGTGCCAATCGAATGCGGACCCAGATTATGGAGGTGCTGGACATGGATCTGATTCGTCAGCAAGCTGAGAACGATGCTGTAGACATCCAGGGGCTTGCCTCCTACATTATCACCACCATGGGCAAGATGTGTGCACCAGCCAGAGATGAGGAAATCAAGAAGCTCCGTGAAAGCTCCGATAACAAAGTGACACTGTTCAGGGAGGTCTTCCGTGTGCTGGACCTGATGAAGGCAGACACAGTCAACTTTACAATCGATAATCTGAGGCCTGTGCTGCAGAGGCAGGGTGTTGAATACGAGAGGGAAAAGTTTCAGAGCATCCTGGACAAAACACCCAGTGCTTTGGAGCACACCACCTCTTGGATCAAGTCAGCAGTGGAGGAGCTGTCGACCACCATCCCCAAAGAACAGCCCAACGGCCCGGGGAAAGGACAGCGACTGGTGCCCGGGCCCTTTCAGATCCTCAACACTGCCTTTTTCTGTATCCTAACATGGGACTATGATAAGGGTCCACTGCCTGAGACCTGGATGACTGATGAGACACGTCTGCGAGAGATTCAACGGCAGCTCCAGCAGTATCAGGCTGTGAACGAGGTCCTGCTCATTGTCTACAGCACCGTTGGAGGGCCTATCCAGGATCTGCCTTCCCTGTCTGACCGCATGAAGAGGATGATTAGTGTGCTGCTGGATGGGATGCATAGCCCGGGCTTTAACCTAGAAGAGGCACTAAAGGGTGTCAGTGCTCAGATCTGCTGTGAGCTCAACAAATCTTTAACAGAGAGGAACTACCCTGCCCTGACCCCAGCGTTGCAGGGCACCCTCACAGGCCAGATCTGCAGCATCACTCAGAAGGACAATCCCATCCGCACTCTTGTTGAGGATCGTGTGCAGCACTACTTCATGGCACTCATCTGTGACCCTAAACCCCAGGTCAAACTAGAAAAGGTACCAGCTGGCTTGACTGCTATCAAGCCTGAACTAGCATTGATGGGAGCAAAGTTCATCTCCCTGGTTAACTACAACAAGGCTGTCTATGGACCTTTCTACGCGGATATAATAAGAAAGCTGATGTTCAGCAGCAACCCACCAGCAGCAAACCCTCCTCAGGACACCATTCAGGACTCGGTCACCTCCAATTAAAACCATACTCTGGCTTGTGTAGTCAaaggagtcttttttttttttggggtctaCTAGACATAGCTAAAGCTAAGGAGATATTACCATAGCTAGGCAGTACAACTGCTGTCAGGCCACTGGAGTTACCTTCATCGTATTGTAAATGTAGTTTATCACTACATTTAGCAGTAAAGGCACTGCAGTGTAGGCGCTATGCATTAGACATTTAACGTGACCTGCATCCTTTGTGATAAATGCTCTAAAATATGCTCTCCTGTGAATATTTACAGCTGCAAAACCAGTGTAAGTGTGATCCATTTTTTAACCTTATGGGTACCCCTACATCGTAAATTTGTTTGTAGTCAGACTGTTATTGTGGAGGGAGTCCACAGGGGGAAAAGGGCGGAACCTTAGAATGTATAAAGCATACAGTAAGCTTTATGAAGCAAAAGGAATAAGTTTGTATATTTAGAAAAGTAGCATATCAGATTCCTTATGTATAACAAGTTATTTATCACTGTTAAAattcatatatattttatatattataactaTGACCACCTTTGAACATCTCAAGGAAAAACATGAGATCGCCCCTTTCCCATTGAATTAGTCCTTTTTGATTGATCTCCCTTTAACTTTATCAGCCAGAAAGCGAAATGTTCTGTATTCTTTTTAATCCACTGATATTACTATACAGCGAAaaaggaagttaaaaaaaataaagtttcggATTTTGACTTCGAAACAACTTTTGTCTGCATGAGTAGCTTTGTGTTGAGGTTAAATCATTTTGCAGTTTTTACTTGAGTAACTTGTCACATGTATGTTCTATCCTTACTTATCTGCCAGTTGAATACTTGTTATGTTGATTCTGTTACATTTTGAGGTACTGTAGTTACAGTATTGCTGTGTTGGCTGTTAGAACCTTTGGGGAAATGAAAGGTGCTGAACTCAAAAGTGGGCCCAATGAAGCACAAAGAAAAGCAGTTGCATTCTTTTACAAAGGTTTACATGGAAATGTTggaagttgttgttgttctctTCTCTATCACCGTTATTATAATAAAACTTCAAAAAGA

Function

symbol description
tcp11l2 Predicted to be involved in signal transduction. Orthologous to human TCP11L2 (t-complex 11 like 2).

NR:

description
PREDICTED: T-complex protein 11-like protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792057.1 True 2796 mRNA 0.45 10 10624020 10632377

Neighbor

gene id symbol gene type direction distance location
apaf1 apaf1 coding downstream 852 10564430 ~ 10623168 (-)
LOC120553502 NA coding downstream 359315 10263985 ~ 10264705 (-)
ckap4 NA coding downstream 376755 10242672 ~ 10247265 (-)
trnay-gua_61 NA coding downstream 427587 10196347 ~ 10196433 (-)
trnay-gua_60 NA coding downstream 428150 10195784 ~ 10195870 (-)
LOC120553733 NA coding upstream 2371 10634748 ~ 10635920 (-)
si:ch211-244b2.3 NA coding upstream 28543 10660920 ~ 10665486 (-)
si:ch211-244b2.4 NA coding upstream 34125 10666502 ~ 10671184 (-)
epyc LOC104967728,LOC104925085 coding upstream 42082 10674459 ~ 10694296 (-)
kera kera,LOC103355179 coding upstream 64103 10696480 ~ 10703162 (-)
G227089 NA non-coding downstream 85604 10538204 ~ 10538416 (-)
LOC120553506 NA non-coding downstream 86183 10509731 ~ 10537837 (-)
G227020 NA non-coding downstream 339935 10220956 ~ 10284085 (-)
G227021 pacsin2,LOC102778832 non-coding downstream 398123 10223494 ~ 10225897 (-)
G227019 NA non-coding downstream 403570 10218086 ~ 10220450 (-)
LOC120553135 NA non-coding upstream 7370 10639747 ~ 10660499 (-)
LOC120553801 NA non-coding upstream 308001 10940378 ~ 10942825 (-)
G227190 LOC104968094 non-coding upstream 316281 10948658 ~ 10949164 (-)
LOC120553014 samd3,LOC101476819 non-coding upstream 327983 10960360 ~ 10975333 (-)
G227211 NA non-coding upstream 391031 11023408 ~ 11023880 (-)
G227082 anks1b other downstream 101058 10513494 ~ 10522962 (-)
dram1 dram1 other downstream 1809580 8809393 ~ 8814440 (-)
ppfia2 ppfia2 other downstream 1830110 8565242 ~ 8793910 (-)
G226495 LOC103356655,LOC105934024 other downstream 2732709 7888571 ~ 7891311 (-)
LOC120553151 LOC107386793,LOC104950937 other downstream 3129713 7422165 ~ 7494307 (-)
G227197 LOC102293685,LOC104918784,LOC102194436 other upstream 347821 10980198 ~ 10981259 (-)
hgfa LOC103365344,LOC104958230 other upstream 826204 11458581 ~ 11482578 (-)
pcloa pclo,LOC107085986,LOC103358500,LOC102794373,LOC108235068,LOC106514760 other upstream 984978 11617355 ~ 11676832 (-)
cracr2ab LOC102301749,LOC103365394 other upstream 1204871 11837248 ~ 11848941 (-)
G227429 LOC104958361,LOC103370548 other upstream 1652549 12284926 ~ 12288154 (-)

Expression


Co-expression Network