gas2l3 (gas2l3)


Basic Information

Item Value
gene id gas2l3
gene name gas2l3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 21335537 ~ 21365108 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792072.1
gcagcatACAGCAGCGGAGAACATGAGTAACTCCAAATAACTGGAGTGCCAAGTCAGGATTTCCACAAGGAAGAACGCTTTAAAAATCAACTCAAAGTGACCAGACTTTCTGCTTGAAGACTCCATACCCTTCCGTTTTCCTGAATGAAGAAGTGAACAATCTTGTGGTCACAGTCATGGCTGTCCAGGCTGGCATCCAGGTTTGGTTTGGCGAGAAGTTTGACGCCCCGCTGCTGAGCCCCAGGAGCCCTCGCAGCCCGTTAGCACAGCGCCACGGCCCCGGCCTCGCCGACGTCTTCCAGTATGACCAGTGGCTGGCCGTGCGACATGAAGCCACCCTGGTGCCCATGCAGGAGGATCTGGCCATCTGGCTCAGCGGCATGCTGGGCGAGGAGGTCAGAGCCGAGTTTTTCATGGACGAGCTGAATAACGGCGTGAAGCTCTGCCAGCTCATCGGCGTGCTGCAGACGAAGATCGCCCAGAGCTGCCCCTCCGCACTCTGCAAGCTGTTCCCCACCAGGAAGATTGCATGTAAGCGCGACGCCTCTCCGGGTTCCTTCTTCGCTCGAGACAACACCGCCAACTTCCTGGCCTGGTGTCGCCACGCCGGCGTGGAGGAGACCTACCTGTTTGAGTCCGAAGGCCTCGTGCTGCACAAGGAGCCTCGGCAagtttgtctctgtctcctggAGATCGGCCGCATCGTCTCCAAGTACGGCGTGGAGCCTCCTGTGCTGGTGAAGCTGGAGAAGGAGATCGAGTTGGAGGAGACTCTGTTGATGACGGAGGAGCCGCGGCCAGCCGTCAAAACCTTCAGCGTGTGCTGCCAGCACGGCGGCCTCTACCAGCCGGGGGAGCACGGCATGGACGACCCACCCTGCAACTGTGCCAACAGAGTCTCCATTGAGTACCTGTCTGAGGGACGCTACAGACTGGGAGACAAGACCCTCTTTATTCGGATGCTTCACGGGAAACACGTGATGGTGCGCGTCGGCGGCGGCTGGGACACGCTGCGCGGTTTCCTGCTGAAGTACGACCCTCTGCGAGTGCTGCAGTTCACCACTCTGGAGCAGAAGATCCTGGCCTTTCAGAAAGGCCCCCCCGGCCTGGGAGGTCACCGGAGCAACGCGGCTCCACCCCCTCCTCCTGACATGGACCCCCTCGCCGCCGTCAACCAGCTCATCTCCtcgtcgtcctcctcctcttcctcctccacgtCGTCGTCGTCGTGTTCCTCTGCGACCGCCGCGGGTCAGGCGTGCCGGTCCTACACCGCCTCCCCGGCCTGCACGCCCACGCTGCCCAGGAAAGGTGCTGCCGCCGTGGCGCCCAGGAAGAACCTGCAGGGGGCGCCTCCTTCCCCCAGGAAGCCCACCCAGCTGCCCCTGCCCACCACCgccaccccccccaccaccaccaaagGTTCCTCGTCTCTGCCCTCCACGCCTGTGGGAGGGTCCTCCAAACCGTCTCCCGGCCCGGGGTGTCGCAGAGCTCTGACTCCGTCCTCGGCTCCGCCACGTGCCCCCGCGGCGCCTCGCCCCGCCTCCAAACTGAAGCTGCGACCGTCCCCGCGGGGGGGCGCGGCCCCTCAGCCCAGGAGCCCCGTCTGCCCCGAGCCGTCTTCCAAATGCCCCAAACCCTCCAGCCCCTGCGCCGCCTCCGTGCCTCGCCCCGCCACCGCACCGGCACGAGCCCCCGCCTCGAAGGACGCCCGGCCCCCGTCCGGCGCCAGCCAGCGCGCTCGCCTACGCGCAAGCGCCGTCCCGGCTCCCCGGCCTCGCGCCTCCGTCTAGAGGCCGCCAGGCGGGTGCGGACGGCCGCGGACCGCAGCGACCCCGACTGGCCAAACCCGGGCCCGGACCCCCGCCCCCAGCTCACGGACAGCCTCCCCGCTGCCCAAACCTACCGGCTCCCTGCCGAAG
>XM_039792073.1
ccatcctcccctcccTGTCATTCCCTCGCTGCCTTTCCTTCCCCACTCACTCGTGGACCCACAGAGGCAGGAGCCGCTCTGGCTGGACAGCACTGAGCCTAGCGCAGGGTTTTGACTCCGCATTGGTGATGAGGATGTGCCTTTGAGGCTGACCGCAGTTGTTTGGCGCAGCTTCCTCGGCCAGTACCGTACCATTTTTTTTGTTCCGAGAATGAAGAAGTGAACAATCTTGTGGTCACAGTCATGGCTGTCCAGGCTGGCATCCAGGTTTGGTTTGGCGAGAAGTTTGACGCCCCGCTGCTGAGCCCCAGGAGCCCTCGCAGCCCGTTAGCACAGCGCCACGGCCCCGGCCTCGCCGACGTCTTCCAGTATGACCAGTGGCTGGCCGTGCGACATGAAGCCACCCTGGTGCCCATGCAGGAGGATCTGGCCATCTGGCTCAGCGGCATGCTGGGCGAGGAGGTCAGAGCCGAGTTTTTCATGGACGAGCTGAATAACGGCGTGAAGCTCTGCCAGCTCATCGGCGTGCTGCAGACGAAGATCGCCCAGAGCTGCCCCTCCGCACTCTGCAAGCTGTTCCCCACCAGGAAGATTGCATGTAAGCGCGACGCCTCTCCGGGTTCCTTCTTCGCTCGAGACAACACCGCCAACTTCCTGGCCTGGTGTCGCCACGCCGGCGTGGAGGAGACCTACCTGTTTGAGTCCGAAGGCCTCGTGCTGCACAAGGAGCCTCGGCAagtttgtctctgtctcctggAGATCGGCCGCATCGTCTCCAAGTACGGCGTGGAGCCTCCTGTGCTGGTGAAGCTGGAGAAGGAGATCGAGTTGGAGGAGACTCTGTTGATGACGGAGGAGCCGCGGCCAGCCGTCAAAACCTTCAGCGTGTGCTGCCAGCACGGCGGCCTCTACCAGCCGGGGGAGCACGGCATGGACGACCCACCCTGCAACTGTGCCAACAGAGTCTCCATTGAGTACCTGTCTGAGGGACGCTACAGACTGGGAGACAAGACCCTCTTTATTCGGATGCTTCACGGGAAACACGTGATGGTGCGCGTCGGCGGCGGCTGGGACACGCTGCGCGGTTTCCTGCTGAAGTACGACCCTCTGCGAGTGCTGCAGTTCACCACTCTGGAGCAGAAGATCCTGGCCTTTCAGAAAGGCCCCCCCGGCCTGGGAGGTCACCGGAGCAACGCGGCTCCACCCCCTCCTCCTGACATGGACCCCCTCGCCGCCGTCAACCAGCTCATCTCCtcgtcgtcctcctcctcttcctcctccacgtCGTCGTCGTCGTGTTCCTCTGCGACCGCCGCGGGTCAGGCGTGCCGGTCCTACACCGCCTCCCCGGCCTGCACGCCCACGCTGCCCAGGAAAGGTGCTGCCGCCGTGGCGCCCAGGAAGAACCTGCAGGGGGCGCCTCCTTCCCCCAGGAAGCCCACCCAGCTGCCCCTGCCCACCACCgccaccccccccaccaccaccaaagGTTCCTCGTCTCTGCCCTCCACGCCTGTGGGAGGGTCCTCCAAACCGTCTCCCGGCCCGGGGTGTCGCAGAGCTCTGACTCCGTCCTCGGCTCCGCCACGTGCCCCCGCGGCGCCTCGCCCCGCCTCCAAACTGAAGCTGCGACCGTCCCCGCGGGGGGGCGCGGCCCCTCAGCCCAGGAGCCCCGTCTGCCCCGAGCCGTCTTCCAAATGCCCCAAACCCTCCAGCCCCTGCGCCGCCTCCGTGCCTCGCCCCGCCACCGCACCGGCACGAGCCCCCGCCTCGAAGGACGCCCGGCCCCCGTCCGGCGCCAGCCAGCGCGCTCGCCTACGCGCAAGCGCCGTCCCGGCTCCCCGGCCTCGCGCCTCCGTCTAGAGGCCGCCAGGCGGGTGCGGACGGCCGCGGACCGCAGCGACCCCGACTGGCCAAACCCGGGCCCGGACCCCCGCCCCCAGCTCACGGACAGCCTCCCCGCTGCCCAAACCTACCGGCTCCCTGCCGAAG

Function

symbol description
gas2l3 Predicted to enable actin filament binding activity and cytoskeletal anchor activity. Acts upstream of or within cell proliferation in hindbrain ventricular zone and ventricular system development. Located in microtubule. Part of filamentous actin. Is expressed in nervous system and neural tube. Orthologous to human GAS2L3 (growth arrest specific 2 like 3).

NR:

description
PREDICTED: GAS2-like protein 3

GO: NA

KEGG:

id description
K24627 GAS2, GAS2L; growth arrest-specific protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792072.1 False 1925 mRNA 0.66 9 21335537 21365108
XM_039792073.1 True 1992 mRNA 0.67 9 21335537 21353473

Neighbor

gene id symbol gene type direction distance location
med21 med21,LOC102798687 coding downstream 34281 21295513 ~ 21301256 (-)
LOC120553384 stk38l coding downstream 42301 21269874 ~ 21293236 (-)
LOC120553569 arntl2,LOC100698791,LOC102799561,LOC102199297,LOC101476868,LOC102299859 coding downstream 73835 21234254 ~ 21261702 (-)
slc13a4 slc13a4 coding downstream 151681 21153201 ~ 21183856 (-)
pik3cg pik3cg coding downstream 289151 21022335 ~ 21046386 (-)
slc38a4 slc38a4 coding upstream 153517 21518625 ~ 21571113 (-)
LOC120553490 ano4,LOC102780176 coding upstream 319102 21684210 ~ 21753271 (-)
LOC120553085 LOC103357120 coding upstream 451074 21816182 ~ 21827934 (-)
selenoo2 LOC106935628,LOC103357121,LOC107081058 coding upstream 463903 21829011 ~ 21836596 (-)
apex1 apex1 coding upstream 525502 21890610 ~ 21894722 (-)
G229296 NA non-coding downstream 70725 21264501 ~ 21264812 (-)
G229248 NA non-coding downstream 136278 21198468 ~ 21199259 (-)
G229235 NA non-coding downstream 273101 21019259 ~ 21062436 (-)
G229172 NA non-coding downstream 468008 20867300 ~ 20867529 (-)
G229168 NA non-coding downstream 555629 20779683 ~ 20779908 (-)
G229351 scaf11,LOC102797309 non-coding upstream 85355 21450463 ~ 21453152 (-)
G229390 NA non-coding upstream 277407 21642515 ~ 21642768 (-)
G229392 NA non-coding upstream 290794 21655902 ~ 21656162 (-)
G229413 NA non-coding upstream 316452 21681560 ~ 21682539 (-)
LOC120553093 NA non-coding upstream 411925 21777033 ~ 21777676 (-)
ptprz1b NA other downstream 190004 21063691 ~ 21145533 (-)
G229199 NA other downstream 377317 20957657 ~ 20958220 (-)
cdk17 LOC104930593 other downstream 980910 20301092 ~ 20354627 (-)
rerg rerg other downstream 1213144 20066895 ~ 20122393 (-)
etv6 etv6 other downstream 1496187 19806814 ~ 19839350 (-)
slc38a2 slc38a2 other upstream 95968 21461076 ~ 21474602 (-)
LOC120553090 NA other upstream 405980 21771088 ~ 21811097 (-)
G229716 NA other upstream 1739652 23104760 ~ 23239573 (-)
glipr1a NA other upstream 1838660 23203768 ~ 23210497 (-)
LOC120553170 NA other upstream 2325411 23690519 ~ 23711804 (-)

Expression


Co-expression Network