mdm1


Basic Information

Item Value
gene id mdm1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 3841996 ~ 3873319 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792091.1
TAAGCTGCCATGGCAACGGCGTCGGCGGGCAGCTTGTTCCTGTAGCTAACCGAAGATCGACCGAAGATGAGGAGCAGCTGGTTAGCACGCTGGCCAACCTAGTTAACTAGTTAAACGATATTAACCAGCTAGTTAACTAAGTCAAAGCCAGCGCAATAAAAAGGAGTGACTTCTCGCGGGGTTTTGTCGGCGGAGAGAGTAGCTATGACCGTTCGCTTCAAGtgTCGGAGTGAATACCAGAAAAGCTACAGGGTTCCCCGGTCCAGAAGTGTGTCTCCTCAGCGCTGCGCTCCATTGGCCGGCCTGCGCTCCGACCAGATGGGTGTCAGCAGAGAACCAGGTCTCCAGCGTCGGAAGAGGCTCGGTCCTGGTGGTGTCGCTCAGTCCTCCGGCTCTCTGCTCTGTCCTCCAGATCCACAGCACACAacagctccccctgctgCCTCTAGGAGTCGCTCAGCCCACCGGAAGGAGTCTCCCATGAAGCCAAATCCTCCAACTCCTCCCGGAGCACGAGCTGACCCTGGATCTCCTGTAGACCCAGAACCTCCAGCAGGACCACGACCTGCCGCAGACCCAGAACCATCAGGAGAACCAGGAGCTGCGGTCACATTTGCGAAGCCCCACCCCTCCAAGCCCGATAGCCAACCGCAGCTGAGCCGACCTTTTACAGCAGCGCCTGACGGACAGCAGCCCTCGGCCAATGAGGTTCAGCACGCTCTGCGGTGGAGGGCGGGGCTGAGGaccggaggtcaaaggtcaggaaGTCATAGGTCAGAGTATCACAGACAGTTCAGCTGGAAGAAACCTGCAGCTGCTGATTCACCCATACTGTATGCAGAACAGATGCTCCACTCCAGCAGCAGATCAGTGCCCCCCTTTAAGAAACACCCCGTTCCCATGGAAACAGAGTATCGGCGCAGCTTCCAGGGTCTGGCCCCGCCTGCCAAGCCCTGCCTACGGAAACACCTGGAACATCATCACAAAGTCCCAttgttccacacacacacgAGCAACAAAAAGAGAAGGCAGGAGTCAGAGAAGAAGGCCCGCCCCAAACATGATGTTCCTGCCCCTCGGAAAGAAGATACTGTGcccccttctcttcctcctcaagTGCAGAGAggacacaggaTGTTGACAGAGTATGAGTCCAGCTTTCGTTCTCCCCTCTACAGGATCCCAGAGGGGGGCGGAGCCACGGACGGCGTGGCCCTTCAGGTGAAGGAGTTGAGGCAGAAGGCCTTGTCGTACCGCCTTCGAGCCTGGGGGGCGAATTTCTCCAGAGATCACCTGAGCCAGCTGCTGTCCGAACACAACGCTCTGTGGGAGCCATCGGACACCACCGACTCGGCAActgacccccccaccccccgcctGACCGTTGACCCCTGTCATGCCGCTGACAGCCGCAGCATTTCCCCTGTGGAGGCCCTGGACCTGgccagCCAGTCCAGTAAGTCCAGTAAGAGGCTTTCTGTTACCGGCTCAgggaacaaaaacacagagacgAAAGCACAGACACCTCCTCGTCCTTCTGCTGAAAGGCGTTCGGCCtggggaggagaaggagaagcagaaggacaggaggaggaagaagaagaaaaaaacgatGAgGAGGAGGGAAGATTACCTACTCCAAGGCTGAAGATAGGACCGGTTCAGAGAACTCACCATGACCTCACCACACCTGCCACcgGAGGCGCTATACTGGTGGGAAAACTGAAGAGCAGTGATGAATCTTCTCCGTATAAACAGAGGTGTGGGTCAGCGGTTTCCATGGCAGCGGGGGCGGAGACTGCTGTCGACGTGCCAATCAAACCGAAGGTGGCGTGGCCGGACAATAACTCCCCCCACCtcccgtcctcctcctcctcctcctcccccccatcTGGCCCCGCCCCCGACCACAAACCAGCCTTGAGTCCTGCCTCTAAACCAATCAGGACGAAGCAGACGCCTCCGCCCCCTGTAGCCCCGCCCCTGCAGCACTGTATCCAAGGCACTCTGAGGCACGCCGACTTCCAGCACAACGGTGATCTGGGTCTGAGGTTCAGGGAGCTGCAGTGTTCAGGAGGAGGCTGCGGCTCTGACGAAGACGACCGTCTGTCGGTGATGTCGTGGCGTTCGGCGGCCTCCTGCTCCGTGGCGTCCGGCGTGCTGGAGCGCGCTCAGAAGAGACGAGACAACTTCTGGGGGAAGAGATGACCC
>XM_039792092.1
TAAGCTGCCATGGCAACGGCGTCGGCGGGCAGCTTGTTCCTGTAGCTAACCGAAGATCGACCGAAGATGAGGAGCAGCTGGTTAGCACGCTGGCCAACCTAGTTAACTAGTTAAACGATATTAACCAGCTAGTTAACTAAGTCAAAGCCAGCGCAATAAAAAGGAGTGACTTCTCGCGGGGTTTTGTCGGCGGAGAGAGTAGCTATGACCGTTCGCTTCAAGtgTCGGAGTGAATACCAGAAAAGCTACAGGGTTCCCCGGTCCAGAAGTGTGTCTCCTCAGCGCTGCGCTCCATTGGCCGGCCTGCGCTCCGACCAGATGGGTGTCAGCAGAGAACCAGGTCTCCAGCGTCGGAAGAGGCTCGGTCCTGGTGGTGTCGCTCAGTCCTCCGGCTCTCTGCTCTGTCCTCCAGATCCACAGCACACAacagctccccctgctgCCTCTAGGAGTCGCTCAGCCCACCGGAAGGAGTCTCCCATGAAGCCAAATCCTCCAACTCCTCCCGGAGCACGAGCTGACCCTGGATCTCCTGTAGACCCAGAACCTCCAGCAGGACCACGACCTGCCGCAGACCCAGAACCATCAGGAGAACCAGGAGCTGCGGTCACATTTGCGAAGCCCCACCCCTCCAAGCCCGATAGCCAACCGCAGCTGAGCCGACCTTTTACAGCAGCGCCTGACGGACAGCAGCCCTCGGCCAATGAGGTTCAGCACGCTCTGCGGTGGAGGGCGGGGCTGAGGaccggaggtcaaaggtcaggaaGTCATAGGTCAGAGTATCACAGACAGTTCAGCTGGAAGAAACCTGCAGCTGCTGATTCACCCATACTGTATGCAGAACAGATGCTCCACTCCAGCAGCAGATCAGTGCCCCCCTTTAAGAAACACCCCGTTCCCATGGAAACAGAGTATCGGCGCAGCTTCCAGGGTCTGGCCCCGCCTGCCAAGCCCTGCCTACGGAAACACCTGGAACATCATCACAAAGTCCCAttgttccacacacacacgAGCAACAAAAAGAGAAGGCAGGAGTCAGAGAAGAAGGCCCGCCCCAAACATGATGTTCCTGCCCCTCGGAAAGAAGATACTGTGcccccttctcttcctcctcaagTGCAGAGAggacacagGATCCCAGAGGGGGGCGGAGCCACGGACGGCGTGGCCCTTCAGGTGAAGGAGTTGAGGCAGAAGGCCTTGTCGTACCGCCTTCGAGCCTGGGGGGCGAATTTCTCCAGAGATCACCTGAGCCAGCTGCTGTCCGAACACAACGCTCTGTGGGAGCCATCGGACACCACCGACTCGGCAActgacccccccaccccccgcctGACCGTTGACCCCTGTCATGCCGCTGACAGCCGCAGCATTTCCCCTGTGGAGGCCCTGGACCTGgccagCCAGTCCAGTAAGTCCAGTAAGAGGCTTTCTGTTACCGGCTCAgggaacaaaaacacagagacgAAAGCACAGACACCTCCTCGTCCTTCTGCTGAAAGGCGTTCGGCCtggggaggagaaggagaagcagaaggacaggaggaggaagaagaagaaaaaaacgatGAgGAGGAGGGAAGATTACCTACTCCAAGGCTGAAGATAGGACCGGTTCAGAGAACTCACCATGACCTCACCACACCTGCCACcgGAGGCGCTATACTGGTGGGAAAACTGAAGAGCAGTGATGAATCTTCTCCGTATAAACAGAGGTGTGGGTCAGCGGTTTCCATGGCAGCGGGGGCGGAGACTGCTGTCGACGTGCCAATCAAACCGAAGGTGGCGTGGCCGGACAATAACTCCCCCCACCtcccgtcctcctcctcctcctcctcccccccatcTGGCCCCGCCCCCGACCACAAACCAGCCTTGAGTCCTGCCTCTAAACCAATCAGGACGAAGCAGACGCCTCCGCCCCCTGTAGCCCCGCCCCTGCAGCACTGTATCCAAGGCACTCTGAGGCACGCCGACTTCCAGCACAACGGTGATCTGGGTCTGAGGTTCAGGGAGCTGCAGTGTTCAGGAGGAGGCTGCGGCTCTGACGAAGACGACCGTCTGTCGGTGATGTCGTGGCGTTCGGCGGCCTCCTGCTCCGTGGCGTCCGGCGTGCTGGAGCGCGCTCAGAAGAGACGAGACAACTTCTGGGGGAAGAGATGACCC
>XM_039792093.1
GCTAAGCTGCCATGGCAACGGCGTCGGCGGGCAGCTTGTTCCTGTAGCTAACCGAAGATCGACCGAAGATGAGGAGCAGCTGGTTAGCACGCTGGCCAACCTAGTTAACTAGTTAAACGATATTAACCAGCTAGTTAACTAAGTCAAAGCCAGCGCAATAAAAAGGAGTGACTTCTCGCGGGGTTTTGTCGGCGGAGAGAGTAGCTATGACCGTTCGCTTCAAGtgTCGGAGTGAATACCAGAAAAGCTACAGGGTTCCCCGGTCCAGAAGTGTGTCTCCTCAGCGCTGCGCTCCATTGGCCGGCCTGCGCTCCGACCAGATGGGTGTCAGCAGAGAACCAGGTCTCCAGCGTCGGAAGAGGCTCGGTCCTGGTGGTGTCGCTCAGTCCTCCGGCTCTCTGCTCTGTCCTCCAGATCCACAGCACACAacagctccccctgctgCCTCTAGGAGTCGCTCAGCCCACCGGAAGGAGTCTCCCATGAAGCCAAATCCTCCAACTCCTCCCGGAGCACGAGCTGACCCTGGATCTCCTGTAGACCCAGAACCTCCAGCAGGACCACGACCTGCCGCAGACCCAGAACCATCAGGAGAACCAGGAGCTGCGGTCACATTTGCGAAGCCCCACCCCTCCAAGCCCGATAGCCAACCGCAGCTGAGCCGACCTTTTACAGCAGCGCCTGACGGACAGCAGCCCTCGGCCAATGAGATGCTCCACTCCAGCAGCAGATCAGTGCCCCCCTTTAAGAAACACCCCGTTCCCATGGAAACAGAGTATCGGCGCAGCTTCCAGGGTCTGGCCCCGCCTGCCAAGCCCTGCCTACGGAAACACCTGGAACATCATCACAAAGTCCCAttgttccacacacacacgAGCAACAAAAAGAGAAGGCAGGAGTCAGAGAAGAAGGCCCGCCCCAAACATGATGTTCCTGCCCCTCGGAAAGAAGATACTGTGcccccttctcttcctcctcaagTGCAGAGAggacacaggaTGTTGACAGAGTATGAGTCCAGCTTTCGTTCTCCCCTCTACAGGATCCCAGAGGGGGGCGGAGCCACGGACGGCGTGGCCCTTCAGGTGAAGGAGTTGAGGCAGAAGGCCTTGTCGTACCGCCTTCGAGCCTGGGGGGCGAATTTCTCCAGAGATCACCTGAGCCAGCTGCTGTCCGAACACAACGCTCTGTGGGAGCCATCGGACACCACCGACTCGGCAActgacccccccaccccccgcctGACCGTTGACCCCTGTCATGCCGCTGACAGCCGCAGCATTTCCCCTGTGGAGGCCCTGGACCTGgccagCCAGTCCAGTAAGTCCAGTAAGAGGCTTTCTGTTACCGGCTCAgggaacaaaaacacagagacgAAAGCACAGACACCTCCTCGTCCTTCTGCTGAAAGGCGTTCGGCCtggggaggagaaggagaagcagaaggacaggaggaggaagaagaagaaaaaaacgatGAgGAGGAGGGAAGATTACCTACTCCAAGGCTGAAGATAGGACCGGTTCAGAGAACTCACCATGACCTCACCACACCTGCCACcgGAGGCGCTATACTGGTGGGAAAACTGAAGAGCAGTGATGAATCTTCTCCGTATAAACAGAGGTGTGGGTCAGCGGTTTCCATGGCAGCGGGGGCGGAGACTGCTGTCGACGTGCCAATCAAACCGAAGGTGGCGTGGCCGGACAATAACTCCCCCCACCtcccgtcctcctcctcctcctcctcccccccatcTGGCCCCGCCCCCGACCACAAACCAGCCTTGAGTCCTGCCTCTAAACCAATCAGGACGAAGCAGACGCCTCCGCCCCCTGTAGCCCCGCCCCTGCAGCACTGTATCCAAGGCACTCTGAGGCACGCCGACTTCCAGCACAACGGTGATCTGGGTCTGAGGTTCAGGGAGCTGCAGTGTTCAGGAGGAGGCTGCGGCTCTGACGAAGACGACCGTCTGTCGGTGATGTCGTGGCGTTCGGCGGCCTCCTGCTCCGTGGCGTCCGGCGTGCTGGAGCGCGCTCAGAAGAGACGAGACAACTTCTGGGGGAAGAGATGACCC
>XM_039792094.1
TAAGCTGCCATGGCAACGGCGTCGGCGGGCAGCTTGTTCCTGTAGCTAACCGAAGATCGACCGAAGATGAGGAGCAGCTGGTTAGCACGCTGGCCAACCTAGTTAACTAGTTAAACGATATTAACCAGCTAGTTAACTAAGTCAAAGCCAGCGCAATAAAAAGGAGTGACTTCTCGCGGGGTTTTGTCGGCGGAGAGAGTAGCTATGACCGTTCGCTTCAAGtgTCGGAGTGAATACCAGAAAAGCTACAGGGTTCCCCGGTCCAGAAGTGTGTCTCCTCAGCGCTGCGCTCCATTGGCCGGCCTGCGCTCCGACCAGATGGGTGTCAGCAGAGAACCAGGTCTCCAGCGTCGGAAGAGGCTCGGTCCTGGTGGTGTCGCTCAGTCCTCCGGCTCTCTGCTCTGTCCTCCAGATCCACAGCACACAacagctccccctgctgCCTCTAGGAGTCGCTCAGCCCACCGGAAGGAGTCTCCCATGAAGCCAAATCCTCCAACTCCTCCCGGAGCACGAGCTGACCCTGGATCTCCTGTAGACCCAGAACCTCCAGCAGGACCACGACCTGCCGCAGACCCAGAACCATCAGGAGAACCAGGAGCTGCGGTCACATTTGCGAAGCCCCACCCCTCCAAGCCCGATAGCCAACCGCAGCTGAGCCGACCTTTTACAGCAGCGCCTGACGGACAGCAGCCCTCGGCCAATGAGGTTCAGCACGCTCTGCGGTGGAGGGCGGGGCTGAGGaccggaggtcaaaggtcaggaaGTCATAGGTCAGAGTATCACAGACAGTTCAGCTGGAAGAAACCTGCAGCTGCTGATTCACCCATACTGTATGCAGAACAGATGCTCCACTCCAGCAGCAGATCAGTGCCCCCCTTTAAGAAACACCCCGTTCCCATGGAAACAGAGTATCGGCGCAGCTTCCAGGGTCTGGCCCCGCCTGCCAAGCCCTGCCTACGGAAACACCTGGAACATCATCACAAAGTCCCAttgttccacacacacacgAGCAACAAAAAGAGAAGGCAGGAGTCAGAGAAGAAGGCCCGCCCCAAACATGATGTTCCTGCCCCTCGGAAAGAAGATACTGTGcccccttctcttcctcctcaagTGCAGAGAggacacaggaTGTTGACAGAGTATGAGTCCAGCTTTCGTTCTCCCCTCTACAGGATCCCAGAGGGGGGCGGAGCCACGGACGGCGTGGCCCTTCAGGTGAAGGAGTTGAGGCAGAAGGCCTTGTCGTACCGCCTTCGAGCCTGGGGGGCGAATTTCTCCAGAGATCACCTGAGCCAGCTGCTGTCCGAACACAACGCTCTGTGGGAGCCATCGGACACCACCGACTCGGCAActgacccccccaccccccgcctGACCGTTGACCCCTGTCATGCCGCTGACAGCCGCAGCATTTCCCCTGTGGAGGCCCTGGACCTGgccagCCAGTCCAGTAAGTCCAGTAAGAGGCTTTCTGTTACCGGCTCAgggaacaaaaacacagagacgAAAGCACAGACACCTCCTCGTCCTTCTGCTGAAAGGCGTTCGGCCtggggaggagaaggagaagcagaaggacaggaggaggaagaagaagaaaaaaacgatGAgGAGGAGGGAAGATTACCTACTCCAAGGCTGAAGATAGGACCGGTTCAGAGAACTCACCATGACCTCACCACACCTGCCACcgGAGGCGCTATACTGGTGGGAAAACTGAAGAGCAGTGATGAATCTTCTCCGTATAAACAGGTGTGGGTCAGCGGTTTCCATGGCAGCGGGGGCGGAGACTGCTGTCGACGTGCCAATCAAACCGAAGGTGGCGTGGCCGGACAATAACTCCCCCCACCtcccgtcctcctcctcctcctcctcccccccatcTGGCCCCGCCCCCGACCACAAACCAGCCTTGAGTCCTGCCTCTAAACCAATCAGGACGAAGCAGACGCCTCCGCCCCCTGTA

Function

NR:

description
PREDICTED: nuclear protein MDM1-like, partial

GO: NA

KEGG:

id description
K17886 MDM1; nuclear protein MDM1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792091.1 True 2211 mRNA 0.59 16 3841998 3873319
XM_039792092.1 False 2166 mRNA 0.59 16 3841998 3873319
XM_039792093.1 False 2075 mRNA 0.59 15 3841996 3873319
XM_039792094.1 False 1972 mRNA 0.58 14 3841998 3866400

Neighbor

gene id symbol gene type direction distance location
cand1 cand1 coding upstream 41401 3736482 ~ 3800595 (+)
LOC120553119 LOC104957567 coding upstream 274403 3546739 ~ 3567593 (+)
cct2 cct2 coding upstream 494010 3328950 ~ 3347986 (+)
LOC120553725 NA coding upstream 539246 3260679 ~ 3302750 (+)
LOC120553565 NA coding upstream 724356 3110841 ~ 3117640 (+)
il22 NA coding downstream 8854 3882173 ~ 3888180 (+)
LOC120553047 NA coding downstream 125415 3998734 ~ 4019042 (+)
LOC120553050 NA coding downstream 220341 4093660 ~ 4107645 (+)
LOC120553052 NA coding downstream 281976 4155295 ~ 4175824 (+)
trnal-caa_13 NA coding downstream 313242 4186561 ~ 4186671 (+)
G225607 NA non-coding upstream 9466 3831438 ~ 3832530 (+)
G225602 NA non-coding upstream 29583 3812130 ~ 3812413 (+)
G225592 NA non-coding upstream 40826 3747857 ~ 3801170 (+)
G225598 NA non-coding upstream 49162 3788412 ~ 3792834 (+)
G225591 NA non-coding upstream 56577 3751953 ~ 3785419 (+)
G225707 NA non-coding downstream 12394 3885713 ~ 3942427 (+)
G225708 NA non-coding downstream 13305 3886624 ~ 3926965 (+)
G225721 NA non-coding downstream 123646 3996965 ~ 4051123 (+)
G225725 NA non-coding downstream 168086 4041405 ~ 4041726 (+)
G225785 NA non-coding downstream 265209 4138528 ~ 4140277 (+)
LOC120553144 rap1b,LOC101070080,LOC100707998,LOC103368175,LOC102210937 other upstream 822 3814481 ~ 3841174 (+)
trnat-ugu_40 NA other upstream 307324 3534600 ~ 3534672 (+)
trnat-ugu_39 NA other upstream 308335 3533589 ~ 3533661 (+)
trnat-ugu_38 NA other upstream 309916 3532008 ~ 3532080 (+)
trnat-ugu_37 NA other upstream 313435 3528489 ~ 3528561 (+)
LOC120553793 NA other downstream 62355 3935674 ~ 3938954 (+)
G225894 NA other downstream 784125 4657444 ~ 4657969 (+)
abcc9 abcc9,LOC107387088 other downstream 1407939 5281258 ~ 5373637 (+)
prkcq prkcq,LOC102789446 other downstream 2787201 6660520 ~ 6686639 (+)
snrpf snrpf,LOC106576293 other downstream 3445198 7318517 ~ 7321189 (+)

Expression


Co-expression Network