mkln1 (mkln1)


Basic Information

Item Value
gene id mkln1
gene name mkln1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 24209619 ~ 24249507 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792096.1
GCCTAGCCTCCCGCTGCTACTTGTATTTCTGCAACAAGATGGCTGTCGTTCCTGAGAGCAGAGTCCTCACTTTCAGCGTTTTTAAATGGAGCTCTTACTCCTCTACATATTTACCCGAGAATATCTTGGTGGACAAACCTAATGATCAGTCTTCCAGGTGGTCTTCTGAGAGCAACTACCCACCACAGTTTTTAATCTTGAAATTGGAAAGGCCGGCAATCGTTCAGAGCATCACCTTCGGGAAGTACGAGAAGACTCACGTCTGCAACCTGAAGAAGTTTAAAGTGTTTGGTGGGATGAGTGAAGAAAACATGACCGAGCTTTTGTCCAGTGGCCTTAAGAATGACTACAACAAAGAAACGTTCACCTTAAAGCACAAGATCGATGAGCAGATGTTTCCCTGCAGATTTGTCAAAATAGTGCCTCTGATGTCTTGGGGTCCCAGTTTTAATTTCAGCATCTGGTACATTGAGCTGCATGGTATCGAAGATCCTGATGTGGTGCAGCCCTGCCTTAACTGGTACAGCAAGTACAGGGAACAGGAAGCCATCCGCCTTTGCCTCAAGCACTTCCGACAGCATAACTACACAGAGGCCTTTGAGTCGCTGCAGAAGAAGACTCGGATAGCACTGGAGCACCCGATGCTCACCCACCTGCACGACCGGCTGGTGCTGCAAGGAGACTTTGACGCCTGCGAGGAGCTCATAGACAAAGCTGTGAGAGATGGCTTGTTTAACCAGTATATCAGCCAGCAGGAGTACAAGCCCAGGTGGAGTCAGATCATCCCGAAATGCAACAAAGGTACAAGCGCCCAAGAAATCAACCGAGACGACGTGAACAGCGACGGCGACGACAACAGGCCGGGGATGAGGGGAGGACATCAAATGGTCATTGACGTCCAGACTGAGACCGTTTACCTGTTTGGGGGCTGGGACGGCACACAGGACCTGGCTGACTTCTGGGCTTACAGTGTTCAGGAAAACCAGTGGGCCTGCATctccagagacacagagaaagagAGCGGTCCGAGCGCTCGCTCGTGCCACAAGATGTGCATAGACTCCCAGCGGCGTCAGATCTACACGCTGGGCCGCTACCTGGACTCCAGCGTCCGGAACAGCAAGTCCCTGAAGAGCGACTTCTACCGCTACGACATCGACGCCAACACCTGGACGCTGCTCAGCGAGGACACGTCGGCCGACGGAGGGCCAAAGCTGGTGTTTGACCATCAGATGTGCATGGACTCCGAGAAGCACATGATCTACACGTTTGGCGGTCGGATCCTGACGTGTAACGGCAGCGTGGAGGACAGTCGGACGTCGGAGCCTCAGTTCAGCGGCCTGTACGCCTACCACTGCCAGGCGGGGACGTGGAGCCTCCTGCGGGAAGACTCGTGTAACGCCGGCCCGGAGGACGTCCAGTCCCGCATCGGCCACTGCATGCTCTTCCACACTAGAAACCGCTGTCTGTACGTGTtcggaggtcagaggtcaaagaCGTACCTCAATGATTTCTTCAGCTACGACGTGGACGGAGACCACGTCGAGATCATATCTGATGGCACCAAGAAGGACTCGGGCATGGTACCGATGACGGGCTTCACCCAGCGAGCCACAATCGACCCCGAGCTCAATGAGATTCACGTCCTCTCGGGCCTCAGCAAAGACAAGGACAAGCGCGAGGAGAACGTCCGCAACTCCTTCTGGATCTACGACATCGCTCGCAACAACTGgtCATGTGTGTATAAGAACGATCAGGCAGTGAAAGAAAACCCCACCAAGGCTCTGCAGGAGGAGGAGCCATGTCCACGCTTTGCACACCAGCTGGTCTACGATGAGATGcacaagGTGCATTATTTGTTTGGTGGAAACCCCGGGAAGTCTTGCTCTCCCAAGATGCGCCTGGACGACTTCTGGTCCCTCAAACTGTGTCGGCCCTCCAAGGAGTACCTGCTCCGCCACTGCAGATACCTCATCAGGAAATACAGGTTTGAGGAGAAGGCCCAGTCGGAGCCGCTGAGTGCGCTGAAATACCTGCAGAACGACCTTTCACTCACGGTGGACCACACAGACCCCGATGAGACCAAAGAGTTCCAGCTTCTTCCCTCGGCTCTCTTCAAGTCCGGCTCTGACTTCATCCCTCTGGgtttctCCGACGTGGACCAGACGTACGCTCAGCGGACGCAGCTCTTCGACACGCTCGTCAACTTCTTCCCGGACAGCATGACTCCGCCCAAGGGCAACCTGGTGGACCTCATCACGCTCTAGCCCCGCCCCCACACCCACCGCCCACCCACTCGCCTCGCCACGCTGGACTGACTttacacccacccacccacagacCCACGCCTGATGGGACGGAGGAGGCAGAGACCAGTTATTTTTCTATTCCTGAAGCCTTCTGGTGGGCTCTGACCCTCTGCTGTGTCCCAGTCTGCATTACCTGGTGGGgaggctccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtggtatCTGGATAAATGAGCCAAACTTGACAacctaaggtgtgtgtgtgtgtttttctctttcccCAACATAtccctttgtttttttcttgctgATGAACATTTCTTGGAGCACGCAAAGCCCGTCTAAACTCTGCCAAACATCGCTTGtgtttttcatttcctcttGATACCCACCTCCCCACAAAGCCCTGAAATGTTAAGGCCAAAAAAGAGGTTTTTgcacgtttttttttcatagatctttcccttttttttcttttttttgttgttgtaaaaaacaaaaatcaaacacTTGATTGTTTTCCTTTGTGCCCATGCAAAACGCCCACACAGTCGACCGCTGGCGTCCATCCACATGTTTTGGAGCAAAAACAGATGATGAGGCGGCGCCTATTCATGCCAAGTGTTGCGAAAAGTGCGGTTCAAATTCCCCGGTTGTTAATCTATTTGAAGGCCGGACGGTGTGACTGTATGACAGTGATACAGGAAACCACTTGACTCTCCACAGCTACAAGCTCTTCTGTTCTTTGGCTTACATTTACCGCGAGCCTCTTCCTCAAACTCCTATGTAAAGTTTCATGTTGATGATTTGGCTAGCTTGCTTTTCTGCGACACATGCCCCCTATTTATGATTGTGATGGCCATGCAGAGGCAAAGACAATGTAATAGTGTTGTAGTAACAATAGAGGAATGAGTCTATGAGATAAAGTTTAATATATATCTAAATATA
>XM_039792097.1
GCCTAGCCTCCCGCTGCTACTTGTATTTCTGCAACAAGATGGCTGTCGTTCCTGAGAGCAGAGTCCTCACTTTCAGCGTTTTTAAATGGAGCTCTTACTCCTCTACATATTTACCCGAGAATATCTTGGTGGACAAACCTAATGATCAGTCTTCCAGGTGGTCTTCTGAGAGCAACTACCCACCACAGTTTTTAATCTTGAAATTGGAAAGGCCGGCAATCGTTCAGAGCATCACCTTCGGGAAGTACGAGAAGACTCACGTCTGCAACCTGAAGAAGTTTAAAGTGTTTGGTGGGATGAGTGAAGAAAACATGACCGAGCTTTTGTCCAGTGGCCTTAAGAATGACTACAACAAAGAAACGTTCACCTTAAAGCACAAGATCGATGAGCAGATGTTTCCCTGCAGATTTGTCAAAATAGTGCCTCTGATGTCTTGGGGTCCCAGTTTTAATTTCAGCATCTGGTACATTGAGCTGCATGGTATCGAAGATCCTGATGTGGTGCAGCCCTGCCTTAACTGGTACAGCAAGTACAGGGAACAGGAAGCCATCCGCCTTTGCCTCAAGCACTTCCGACAGCATAACTACACAGAGGCCTTTGAGTCGCTGCAGAAGAAGACTCGGATAGCACTGGAGCACCCGATGCTCACCCACCTGCACGACCGGCTGGTGCTGCAAGGAGACTTTGACGCCTGCGAGGAGCTCATAGACAAAGCTGTGAGAGATGGCTTGTTTAACCAGTATATCAGCCAGCAGGAGTACAAGCCCAGGTGGAGTCAGATCATCCCGAAATGCAACAAAGGCGACGGCGACGACAACAGGCCGGGGATGAGGGGAGGACATCAAATGGTCATTGACGTCCAGACTGAGACCGTTTACCTGTTTGGGGGCTGGGACGGCACACAGGACCTGGCTGACTTCTGGGCTTACAGTGTTCAGGAAAACCAGTGGGCCTGCATctccagagacacagagaaagagAGCGGTCCGAGCGCTCGCTCGTGCCACAAGATGTGCATAGACTCCCAGCGGCGTCAGATCTACACGCTGGGCCGCTACCTGGACTCCAGCGTCCGGAACAGCAAGTCCCTGAAGAGCGACTTCTACCGCTACGACATCGACGCCAACACCTGGACGCTGCTCAGCGAGGACACGTCGGCCGACGGAGGGCCAAAGCTGGTGTTTGACCATCAGATGTGCATGGACTCCGAGAAGCACATGATCTACACGTTTGGCGGTCGGATCCTGACGTGTAACGGCAGCGTGGAGGACAGTCGGACGTCGGAGCCTCAGTTCAGCGGCCTGTACGCCTACCACTGCCAGGCGGGGACGTGGAGCCTCCTGCGGGAAGACTCGTGTAACGCCGGCCCGGAGGACGTCCAGTCCCGCATCGGCCACTGCATGCTCTTCCACACTAGAAACCGCTGTCTGTACGTGTtcggaggtcagaggtcaaagaCGTACCTCAATGATTTCTTCAGCTACGACGTGGACGGAGACCACGTCGAGATCATATCTGATGGCACCAAGAAGGACTCGGGCATGGTACCGATGACGGGCTTCACCCAGCGAGCCACAATCGACCCCGAGCTCAATGAGATTCACGTCCTCTCGGGCCTCAGCAAAGACAAGGACAAGCGCGAGGAGAACGTCCGCAACTCCTTCTGGATCTACGACATCGCTCGCAACAACTGgtCATGTGTGTATAAGAACGATCAGGCAGTGAAAGAAAACCCCACCAAGGCTCTGCAGGAGGAGGAGCCATGTCCACGCTTTGCACACCAGCTGGTCTACGATGAGATGcacaagGTGCATTATTTGTTTGGTGGAAACCCCGGGAAGTCTTGCTCTCCCAAGATGCGCCTGGACGACTTCTGGTCCCTCAAACTGTGTCGGCCCTCCAAGGAGTACCTGCTCCGCCACTGCAGATACCTCATCAGGAAATACAGGTTTGAGGAGAAGGCCCAGTCGGAGCCGCTGAGTGCGCTGAAATACCTGCAGAACGACCTTTCACTCACGGTGGACCACACAGACCCCGATGAGACCAAAGAGTTCCAGCTTCTTCCCTCGGCTCTCTTCAAGTCCGGCTCTGACTTCATCCCTCTGGgtttctCCGACGTGGACCAGACGTACGCTCAGCGGACGCAGCTCTTCGACACGCTCGTCAACTTCTTCCCGGACAGCATGACTCCGCCCAAGGGCAACCTGGTGGACCTCATCACGCTCTAG

Function

symbol description
mkln1 Predicted to be active in cytoplasm. Orthologous to human MKLN1 (muskelin 1).

NR:

description
muskelin isoform X3

GO: NA

KEGG:

id description
K23337 MKLN1; muskelin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792096.1 True 3312 mRNA 0.52 18 24209619 24249507
XM_039792097.1 False 2228 mRNA 0.55 18 24209619 24248462

Neighbor

gene id symbol gene type direction distance location
asb13a.1 LOC103363234,LOC100709988,LOC105929846,LOC101482319,LOC102215476,LOC108241840 coding upstream 275743 23924156 ~ 23933876 (+)
gdi2 gdi2,LOC104923747 coding upstream 295806 23899241 ~ 23913813 (+)
ankrd16 ankrd16,LOC102787719 coding upstream 311721 23886747 ~ 23897898 (+)
trnay-gua_62 NA coding upstream 322195 23887337 ~ 23887424 (+)
ppp6r2a LOC104923754 coding upstream 502651 23686003 ~ 23706968 (+)
ift46 LOC107372934 coding downstream 52258 24301765 ~ 24308444 (+)
LOC120553464 LOC107381693,LOC105020203 coding downstream 70769 24320276 ~ 24365349 (+)
chst11 chst11 coding downstream 135391 24384898 ~ 24478763 (+)
nopchap1 LOC104942935 coding downstream 316734 24566241 ~ 24571321 (+)
LOC120553040 NA coding downstream 347843 24597350 ~ 24604947 (+)
G229994 NA non-coding upstream 93498 24112965 ~ 24116121 (+)
LOC120553514 NA non-coding upstream 114454 24088025 ~ 24095165 (+)
G229976 net1 non-coding upstream 142630 24065214 ~ 24066989 (+)
G229974 NA non-coding upstream 214784 23994566 ~ 23994835 (+)
LOC120553072 NA non-coding upstream 238006 23969947 ~ 23971613 (+)
G230011 NA non-coding downstream 10552 24260059 ~ 24264065 (+)
G230109 NA non-coding downstream 232803 24482310 ~ 24485517 (+)
G230192 NA non-coding downstream 546446 24795953 ~ 24798741 (+)
G230249 NA non-coding downstream 935305 25184812 ~ 25191943 (+)
G230260 NA non-coding downstream 1102370 25351877 ~ 25352174 (+)
LOC120553686 LOC105929833,LOC107382334 other upstream 263979 23934300 ~ 23945640 (+)
adm2a NA other upstream 360995 23833018 ~ 23848624 (+)
kcnc2 kcnc2,LOC100689973,LOC101475944 other upstream 768956 23315421 ~ 23440663 (+)
phlda1 phlda1 other upstream 1466440 22739717 ~ 22743179 (+)
G229428 NA other upstream 2341322 21867201 ~ 21868297 (+)
LOC120553083 NA other downstream 60035 24309542 ~ 24314707 (+)
G230148 LOC102781993,LOC101465723 other downstream 371305 24620812 ~ 24778258 (+)
LOC120553523 NA other downstream 1113375 25362882 ~ 25373996 (+)
msrb3 msrb3 other downstream 1392333 25641840 ~ 25662819 (+)
LOC120553706 NA other downstream 1560900 25810407 ~ 25812828 (+)

Expression


Co-expression Network