LOC120553577


Basic Information

Item Value
gene id LOC120553577
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 23177186 ~ 23187762 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792150.1
agagagagagagaggaagagtaaGCAGAAGTGTAGACGCGACCGGAGCAGAGAtggtggaataagtttaagttttgtacaAAGTGTGTGCAGTGTCCGAAATAAACCCCAGACTGGAAGCAAAGTTCAGGaatttgctcaccagaaacagGATTTTAACCCCCACGTTATTCTttttataacgtcggccctggaggtaaccagtctcACCTGCTTTCTGACCACGATCAAAGGTTAATTGAACATTGTAACAGCTTATTAAGTACTGGAGGAAGTGCTCACCGTGCTAAGCTGCAGCCATAGATGAAGACTATCATGAAGGCCAGAGCTTGTATAAGAAAGGAGTACAgcgtcctcttcctctgtctggCTGTGGCTGTTTTAATCCTTGTTCTACGTAACATGGAGGTACTGAAGACCTCCAGCCAGTTTCAGCATGAGGTGAACTCCACCATCATGGCCCCGAGAGTTTCCACTGACCCTGACGTGCATCGGGGCTTCTGCACCTTCCAGCCACTGTCCCCTGAGGACGCTCTGGAGGAACGCCTCCTACTGGACTCCATTGCTTGGCCTGAAACTCCACTATTGCCAACTCCTCTTATCCTGGAGCAGACCAGTGACCCAGCTCACAGCACCTTCACCATTCTCccagggagggggggaggacaGTGGCACGTAGGGGATCAGCTGGAGGTTAGGATCAATATGGCTGATTTCCAGGGCCGTCCCAAGAAGTCTGGGGGAGACTTGTTACTCGCCCGGCTGCACAACCAGACGCTTGGTGCGGGTGTGGCTGGACAGGTGGTGGATCATCTGAATGGCAGCTACTCTGCTGTATTCTCTTTACTCTGGGAAGGAGACGCGCAGGTTGAGGTGATGCTGGCTCACCCTAGTGAGGCTATCACAGTACTGAAGAGACTGAAGAGTGAAGAACCTGACAGGATAAGCCACAAGAGCCTCTTCCGCTCAGGCTCACTCTCTGAAACTACCAGCTGTAATGTCTGCCTACGTCCAACCCAGCAGCCGCTGTGCAACCACACTGACCTCCGTACAGGCAATCCTTGGTTCTGCTACAAGCCGAAGAAGCTGAGCTGTGATGCCAGGATCGACCACGCTAAGGGAACATACAACCAAACCTTTAAGGCCACAGAGGAGAAACTCTTTCAaagTGGTGTCAACATGAAAGTGTACATACGGGCTTCAGGACCTGCCAATGTCACCGTGTTGCCAAAAAAGGAAGGTCAACCAGAGGTGGAGAGCAGCACTGTCAAGGTTGGACCCTCTGGCTATTACTACCAGGGTGTTTGGCAAGCACTAAGTGGCACCAAAGTTCGCCAATTCAACGCAGCTGCTATCAGTCAGTGTCTGAAAGGCAAGGTGGTCCACATGCATGGGGACTCCACCATCAGGCAGTTTTTTGAATTCCTCAACGCAGCACTACCAGGTCTTAAGGAGTTTGACCTGCACAGCCAGAGGGTAGCTGGACCTTTCATGGCTTTGGACTATGCAAACAACATCTTGGTGAAATTCCGCTTCCACTCTCCTCCTATCCAGAGTCCTCCTGTCCTAACCAGCAAGCTTCGTTACATTGCCAATGAAATAGATGACTTAATCGGAGGCACCGACACTGTTGTAGTTTTTGGCATCTGGGCTCATTTTGCCACTTACCCGATGCAGATCTACATCCGGCGGCTGCAGAGCATCCGCAGGGCGGTGGTGCGGCTGCTGGACAGGGCTCCAGGGACAGTGGTCGTCATCCGGACCGGGACCCCCAGAGACGTGACGCTAATTTACAACGACTGGCACTCGCTGCAGTGTTATAAGGTGCTCAGAACCATGTTCAAAGGACTCAACGTTCATCTGATCGATGCCTGGGAGATGGTCCTTGCCCACCACCTGCCGCACAACGTCCATCCACCACGTCCCATTATTGAGAACATGATTAACGTTTTCTTGTCCTACACATGTCCTCAAAAGGGCGgctagatgtgtgtgtgtgttggggagaGAAGTGGAGATTCAAGCACACATTGAGTTTACATCTTATCTTTTGTTgcaattttctttattttgtatctACAAAACTTGGAAAATATAAGTAAAATCCAACTGGAATAAAGTTATACTTTA
>XM_039792151.1
agagagagagagaggaagagtaaGCAGAAGTGTAGACGCGACCGGAGCAGAGAtggtggaataagtttaagttttgtacaAAGTGTGTGCAGTGTCCGAAATAAACCCCAGACTGGAAGCAAAGTTCAGGaatttgctcaccagaaacagGATTTTAACCCCCACGTTATTCTttttataacgtcggccctggaggtaaccagtctcACCTGCTTTCTGACCACGATCAAAGTACTGGAGGAAGTGCTCACCGTGCTAAGCTGCAGCCATAGATGAAGACTATCATGAAGGCCAGAGCTTGTATAAGAAAGGAGTACAgcgtcctcttcctctgtctggCTGTGGCTGTTTTAATCCTTGTTCTACGTAACATGGAGGTACTGAAGACCTCCAGCCAGTTTCAGCATGAGGTGAACTCCACCATCATGGCCCCGAGAGTTTCCACTGACCCTGACGTGCATCGGGGCTTCTGCACCTTCCAGCCACTGTCCCCTGAGGACGCTCTGGAGGAACGCCTCCTACTGGACTCCATTGCTTGGCCTGAAACTCCACTATTGCCAACTCCTCTTATCCTGGAGCAGACCAGTGACCCAGCTCACAGCACCTTCACCATTCTCccagggagggggggaggacaGTGGCACGTAGGGGATCAGCTGGAGGTTAGGATCAATATGGCTGATTTCCAGGGCCGTCCCAAGAAGTCTGGGGGAGACTTGTTACTCGCCCGGCTGCACAACCAGACGCTTGGTGCGGGTGTGGCTGGACAGGTGGTGGATCATCTGAATGGCAGCTACTCTGCTGTATTCTCTTTACTCTGGGAAGGAGACGCGCAGGTTGAGGTGATGCTGGCTCACCCTAGTGAGGCTATCACAGTACTGAAGAGACTGAAGAGTGAAGAACCTGACAGGATAAGCCACAAGAGCCTCTTCCGCTCAGGCTCACTCTCTGAAACTACCAGCTGTAATGTCTGCCTACGTCCAACCCAGCAGCCGCTGTGCAACCACACTGACCTCCGTACAGGCAATCCTTGGTTCTGCTACAAGCCGAAGAAGCTGAGCTGTGATGCCAGGATCGACCACGCTAAGGGAACATACAACCAAACCTTTAAGGCCACAGAGGAGAAACTCTTTCAaagTGGTGTCAACATGAAAGTGTACATACGGGCTTCAGGACCTGCCAATGTCACCGTGTTGCCAAAAAAGGAAGGTCAACCAGAGGTGGAGAGCAGCACTGTCAAGGTTGGACCCTCTGGCTATTACTACCAGGGTGTTTGGCAAGCACTAAGTGGCACCAAAGTTCGCCAATTCAACGCAGCTGCTATCAGTCAGTGTCTGAAAGGCAAGGTGGTCCACATGCATGGGGACTCCACCATCAGGCAGTTTTTTGAATTCCTCAACGCAGCACTACCAGGTCTTAAGGAGTTTGACCTGCACAGCCAGAGGGTAGCTGGACCTTTCATGGCTTTGGACTATGCAAACAACATCTTGGTGAAATTCCGCTTCCACTCTCCTCCTATCCAGAGTCCTCCTGTCCTAACCAGCAAGCTTCGTTACATTGCCAATGAAATAGATGACTTAATCGGAGGCACCGACACTGTTGTAGTTTTTGGCATCTGGGCTCATTTTGCCACTTACCCGATGCAGATCTACATCCGGCGGCTGCAGAGCATCCGCAGGGCGGTGGTGCGGCTGCTGGACAGGGCTCCAGGGACAGTGGTCGTCATCCGGACCGGGACCCCCAGAGACGTGACGCTAATTTACAACGACTGGCACTCGCTGCAGTGTTATAAGGTGCTCAGAACCATGTTCAAAGGACTCAACGTTCATCTGATCGATGCCTGGGAGATGGTCCTTGCCCACCACCTGCCGCACAACGTCCATCCACCACGTCCCATTATTGAGAACATGATTAACGTTTTCTTGTCCTACACATGTCCTCAAAAGGGCGgctagatgtgtgtgtgtgttggggagaGAAGTGGAGATTCAAGCACACATTGAGTTTACATCTTATCTTTTGTTgcaattttctttattttgtatctACAAAACTTGGAAAATATAAGTAAAATCCAACTGGAATAAAGTTATACTTTA
>XM_039792152.1
agagagagagagaggaagagtaaGCAGAAGTGTAGACGCGACCGGAGCAGAGAtggtggaataagtttaagttttgtacaAAGTGTGTGCAGTGTCCGAAATAAACCCCAGACTGGAAGCAAAGTTCAGGaatttgctcaccagaaacagGATTTTAACCCCCACGTTATTCTttttataacgtcggccctggagTACTGGAGGAAGTGCTCACCGTGCTAAGCTGCAGCCATAGATGAAGACTATCATGAAGGCCAGAGCTTGTATAAGAAAGGAGTACAgcgtcctcttcctctgtctggCTGTGGCTGTTTTAATCCTTGTTCTACGTAACATGGAGGTACTGAAGACCTCCAGCCAGTTTCAGCATGAGGTGAACTCCACCATCATGGCCCCGAGAGTTTCCACTGACCCTGACGTGCATCGGGGCTTCTGCACCTTCCAGCCACTGTCCCCTGAGGACGCTCTGGAGGAACGCCTCCTACTGGACTCCATTGCTTGGCCTGAAACTCCACTATTGCCAACTCCTCTTATCCTGGAGCAGACCAGTGACCCAGCTCACAGCACCTTCACCATTCTCccagggagggggggaggacaGTGGCACGTAGGGGATCAGCTGGAGGTTAGGATCAATATGGCTGATTTCCAGGGCCGTCCCAAGAAGTCTGGGGGAGACTTGTTACTCGCCCGGCTGCACAACCAGACGCTTGGTGCGGGTGTGGCTGGACAGGTGGTGGATCATCTGAATGGCAGCTACTCTGCTGTATTCTCTTTACTCTGGGAAGGAGACGCGCAGGTTGAGGTGATGCTGGCTCACCCTAGTGAGGCTATCACAGTACTGAAGAGACTGAAGAGTGAAGAACCTGACAGGATAAGCCACAAGAGCCTCTTCCGCTCAGGCTCACTCTCTGAAACTACCAGCTGTAATGTCTGCCTACGTCCAACCCAGCAGCCGCTGTGCAACCACACTGACCTCCGTACAGGCAATCCTTGGTTCTGCTACAAGCCGAAGAAGCTGAGCTGTGATGCCAGGATCGACCACGCTAAGGGAACATACAACCAAACCTTTAAGGCCACAGAGGAGAAACTCTTTCAaagTGGTGTCAACATGAAAGTGTACATACGGGCTTCAGGACCTGCCAATGTCACCGTGTTGCCAAAAAAGGAAGGTCAACCAGAGGTGGAGAGCAGCACTGTCAAGGTTGGACCCTCTGGCTATTACTACCAGGGTGTTTGGCAAGCACTAAGTGGCACCAAAGTTCGCCAATTCAACGCAGCTGCTATCAGTCAGTGTCTGAAAGGCAAGGTGGTCCACATGCATGGGGACTCCACCATCAGGCAGTTTTTTGAATTCCTCAACGCAGCACTACCAGGTCTTAAGGAGTTTGACCTGCACAGCCAGAGGGTAGCTGGACCTTTCATGGCTTTGGACTATGCAAACAACATCTTGGTGAAATTCCGCTTCCACTCTCCTCCTATCCAGAGTCCTCCTGTCCTAACCAGCAAGCTTCGTTACATTGCCAATGAAATAGATGACTTAATCGGAGGCACCGACACTGTTGTAGTTTTTGGCATCTGGGCTCATTTTGCCACTTACCCGATGCAGATCTACATCCGGCGGCTGCAGAGCATCCGCAGGGCGGTGGTGCGGCTGCTGGACAGGGCTCCAGGGACAGTGGTCGTCATCCGGACCGGGACCCCCAGAGACGTGACGCTAATTTACAACGACTGGCACTCGCTGCAGTGTTATAAGGTGCTCAGAACCATGTTCAAAGGACTCAACGTTCATCTGATCGATGCCTGGGAGATGGTCCTTGCCCACCACCTGCCGCACAACGTCCATCCACCACGTCCCATTATTGAGAACATGATTAACGTTTTCTTGTCCTACACATGTCCTCAAAAGGGCGgctagatgtgtgtgtgtgttggggagaGAAGTGGAGATTCAAGCACACATTGAGTTTACATCTTATCTTTTGTTgcaattttctttattttgtatctACAAAACTTGGAAAATATAAGTAAAATCCAACTGGAATAAAGTTATACTTTA
>XM_039792153.1
ACAATACAAATTTCCTGGTACTGGAGGAAGTGCTCACCGTGCTAAGCTGCAGCCATAGATGAAGACTATCATGAAGGCCAGAGCTTGTATAAGAAAGGAGTACAgcgtcctcttcctctgtctggCTGTGGCTGTTTTAATCCTTGTTCTACGTAACATGGAGGTACTGAAGACCTCCAGCCAGTTTCAGCATGAGGTGAACTCCACCATCATGGCCCCGAGAGTTTCCACTGACCCTGACGTGCATCGGGGCTTCTGCACCTTCCAGCCACTGTCCCCTGAGGACGCTCTGGAGGAACGCCTCCTACTGGACTCCATTGCTTGGCCTGAAACTCCACTATTGCCAACTCCTCTTATCCTGGAGCAGACCAGTGACCCAGCTCACAGCACCTTCACCATTCTCccagggagggggggaggacaGTGGCACGTAGGGGATCAGCTGGAGGTTAGGATCAATATGGCTGATTTCCAGGGCCGTCCCAAGAAGTCTGGGGGAGACTTGTTACTCGCCCGGCTGCACAACCAGACGCTTGGTGCGGGTGTGGCTGGACAGGTGGTGGATCATCTGAATGGCAGCTACTCTGCTGTATTCTCTTTACTCTGGGAAGGAGACGCGCAGGTTGAGGTGATGCTGGCTCACCCTAGTGAGGCTATCACAGTACTGAAGAGACTGAAGAGTGAAGAACCTGACAGGATAAGCCACAAGAGCCTCTTCCGCTCAGGCTCACTCTCTGAAACTACCAGCTGTAATGTCTGCCTACGTCCAACCCAGCAGCCGCTGTGCAACCACACTGACCTCCGTACAGGCAATCCTTGGTTCTGCTACAAGCCGAAGAAGCTGAGCTGTGATGCCAGGATCGACCACGCTAAGGGAACATACAACCAAACCTTTAAGGCCACAGAGGAGAAACTCTTTCAaagTGGTGTCAACATGAAAGTGTACATACGGGCTTCAGGACCTGCCAATGTCACCGTGTTGCCAAAAAAGGAAGGTCAACCAGAGGTGGAGAGCAGCACTGTCAAGGTTGGACCCTCTGGCTATTACTACCAGGGTGTTTGGCAAGCACTAAGTGGCACCAAAGTTCGCCAATTCAACGCAGCTGCTATCAGTCAGTGTCTGAAAGGCAAGGTGGTCCACATGCATGGGGACTCCACCATCAGGCAGTTTTTTGAATTCCTCAACGCAGCACTACCAGGTCTTAAGGAGTTTGACCTGCACAGCCAGAGGGTAGCTGGACCTTTCATGGCTTTGGACTATGCAAACAACATCTTGGTGAAATTCCGCTTCCACTCTCCTCCTATCCAGAGTCCTCCTGTCCTAACCAGCAAGCTTCGTTACATTGCCAATGAAATAGATGACTTAATCGGAGGCACCGACACTGTTGTAGTTTTTGGCATCTGGGCTCATTTTGCCACTTACCCGATGCAGATCTACATCCGGCGGCTGCAGAGCATCCGCAGGGCGGTGGTGCGGCTGCTGGACAGGGCTCCAGGGACAGTGGTCGTCATCCGGACCGGGACCCCCAGAGACGTGACGCTAATTTACAACGACTGGCACTCGCTGCAGTGTTATAAGGTGCTCAGAACCATGTTCAAAGGACTCAACGTTCATCTGATCGATGCCTGGGAGATGGTCCTTGCCCACCACCTGCCGCACAACGTCCATCCACCACGTCCCATTATTGAGAACATGATTAACGTTTTCTTGTCCTACACATGTCCTCAAAAGGGCGgctagatgtgtgtgtgtgttggggagaGAAGTGGAGATTCAAGCACACATTGAGTTTACATCTTATCTTTTGTTgcaattttctttattttgtatctACAAAACTTGGAAAATATAAGTAAAATCCAACTGGAATAAAGTTATACTTTA

Function

GO: NA

KEGG:

id description
ko04914 Progesterone-mediated oocyte maturation

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792150.1 True 2129 mRNA 0.50 7 23177186 23187762
XM_039792151.1 False 2099 mRNA 0.51 7 23177186 23187762
XM_039792152.1 False 2062 mRNA 0.51 7 23177186 23187762
XM_039792153.1 False 1885 mRNA 0.51 7 23177186 23186611

Neighbor

gene id symbol gene type direction distance location
LOC120553037 NA coding downstream 60765 23092819 ~ 23116421 (-)
LOC120553034 NA coding downstream 235067 22920182 ~ 22942119 (-)
LOC120553033 LOC103354931,LOC102080527,LOC102775588,LOC101467455 coding downstream 284005 22875923 ~ 22893181 (-)
zdhhc17 zdhhc17,LOC102798393 coding downstream 603281 22534254 ~ 22573905 (-)
nav3 nav3 coding downstream 998079 21948736 ~ 22179107 (-)
cmah LOC101476433,LOC102306063,LOC100691852,LOC101466628,LOC102209249,LOC102786627,LOC103459632 coding upstream 41321 23229083 ~ 23275543 (-)
phax NA coding upstream 341995 23529757 ~ 23531807 (-)
dnajc2 dnajc2 coding upstream 374398 23562160 ~ 23588760 (-)
slc26a5 NA coding upstream 406590 23594352 ~ 23617076 (-)
cbll1 cbll1 coding upstream 489406 23677168 ~ 23684068 (-)
G229748 NA non-coding downstream 56757 23046595 ~ 23120429 (-)
LOC120553038 NA non-coding downstream 91592 23084579 ~ 23085594 (-)
G229626 NA non-coding downstream 316775 22860118 ~ 22860411 (-)
G229624 NA non-coding downstream 330103 22846854 ~ 22847083 (-)
G229616 NA non-coding downstream 432087 22741374 ~ 22745099 (-)
G229782 NA non-coding upstream 95767 23283529 ~ 23284051 (-)
G229784 NA non-coding upstream 97805 23285567 ~ 23286896 (-)
G229774 NA non-coding upstream 110947 23298709 ~ 23313086 (-)
G229802 NA non-coding upstream 225354 23413116 ~ 23413758 (-)
G229867 NA non-coding upstream 339343 23527105 ~ 23527539 (-)
LOC120553090 NA other downstream 1366089 21771088 ~ 21811097 (-)
slc38a2 slc38a2 other downstream 1702584 21461076 ~ 21474602 (-)
ptprz1b NA other downstream 2031653 21063691 ~ 21145533 (-)
G229199 NA other downstream 2218966 20957657 ~ 20958220 (-)
cdk17 LOC104930593 other downstream 2822559 20301092 ~ 20354627 (-)
glipr1a NA other upstream 16006 23203768 ~ 23210497 (-)
LOC120553170 NA other upstream 502757 23690519 ~ 23711804 (-)
G229907 NA other upstream 511935 23699697 ~ 23700198 (-)
LOC120553046 NA other upstream 670457 23858219 ~ 23863974 (-)
G229950 gdi2,LOC100708443,LOC102215003 other upstream 720794 23908556 ~ 23914692 (-)

Expression


Co-expression Network