dhx57 (dhx57)


Basic Information

Item Value
gene id dhx57
gene name dhx57
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 16869736 ~ 16880178 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792197.1
CTCTGAGCTTCGACCTATGGCTTCAACCAATGAAAGAGATGCAGGCTACCGGTGGTCAGAACAACTTTTTCAGATTGGTTGCTGCTATGAAAGGACATTAATTGAAGAGAAATGAATGCAAGGAGAAGAGGTGGGAAGCCAAACAGAGGAGGGGGGAGGTTTAACAAGTCAaaaggaggtggaggtggaggtggtggaggCGGAGGCGGAGGTGGAAGTAAGAAAGCCGGAGCTGGTTGCTGGGATGACGGTGATGATTTCAGCCTTGAATTTGGACCCTCTCGTCCCAGCAGACCTGGTAGAGGACGTGGTGCTGGGGgccgtggtggtggtggtggcggccgtggtggtggtggcagcaGCCGTGGTGGTGGCCGTGGTGGCGCCAGGGATGTAGGCCGTGGTGGCGCCAGGGATGTAGGTCGAGGAAGGGGAGGTAGAGATCGAGACAGGGACGGCAGAAGCGATGGGAAAGGCAGCAGCGGCAAGGCTCTCCCAAGGTCCCTGGCAAGGACACGAACAAGCCCAATGTCGGGTGACAGCATCAGGCCGGAGATGAGCACCATGCCCTTGCAGAAGATCTTCATGACTGATGAGAACCAAGAACAACTCAAGGAGCTGCTGCGGAATCTGCAGACCCAGGACTTTGACGAGCCATATGATGTATCTGATTCCGATTATTCGGGAGgagaagaggatgaggaggaatTTGATGAGTTGGACCACCGCGATGAAGGCCAGTTTTGGGCCACTAATGATGAGCCTGTGGAGAGGGCAGAGAGCCCAGCATATGAGACAGAGTCTGACGATGAACGGCCCACCCCTGAACCTGTCATATCCTTATTTGCTATAGGAAAAATCTGCAGGTATGGGTTTGACAGGGAGCGCAGCAAGCAGGCATTGAAGTCTGGTGGAGGGGAATTCGGGGCCACTTTGGAACAGCTCCTCCAACAGGTTTTCAGGGAGCGCTACGGCCAGAAAGCAATTTCCCCTGATGGCCTGGAAGGGGTGCCTATGGATGAGTGTTTGAGCCAGAGGCAGGAGGAAGCTCTGGCTCTAACTGCCATTTATGGTGAGCGCTTCGGTGAGCGCATTGCTAATACAGTCTGGACAGTAACCCTAGACCTCTCATTCCTCTCAGACATAGCTGCCAAGAATGGTAGGCAATCCGGGAGTCGAGGTGGCGGAGGAGCCGTTAACATTCGAGATGTCTGCCGATTCTACTTGAAAGGACAGGGCTGCAGGTTTGGGGACAAATGCAAGTTTAAGCACCATCTCCCCACTAAAGGGAGATCTGGGGCTGGTTCCCCAGACCTGGAGGGCCCTAGCCAGCCTGGCTTCAGCAGCTATTCTCCTCCTGAGTATGAACTCGAGGTCCGTTTCCCTAAAGGCAACCGTTACCCATTTCAGGCACCAATAGTCGCCTTCAGCACCACCGACGAGTCATTCGGGGCTGCAGGGAGGATCAGCTTGACTGAAAGATTGTTTGGAGAAGCGTTGGCCGCAGCAAAGAGCAGCGAGCCTGTTGTTTACACCCTGATCACCTTATGTGAGGATGAATCTACTGTGAAGGAAGTGCTGGCCGTTAGTCATCACAAATACAGCTCGCCACCGCCTGTTGTAGtgcctcctcccccctctcttgCCATGGCTAAGAGTGTGAGGAGCATTGCCTCTGAGGAAAGCAGGAATAGTAGTACTAATAATCATACCAACAGCAGAAGGACTGCTCCACCTACCAACCAGAGACCCGTAGATCTGAAAGagacagaagaggaagaggagcaggatGAGAGGGAGGATGACGATGAGAATGAGTCTGTTCCAGTTGAGACTGAAAGTTATGTCAATCTAAGGAAGAAAATGGTCACTAAACACAACCTGAAGATAGACAACCTACTGAAAGAAAATGGCAAGCTGTGTCGAGAGTTTAAaaagaaacagTCATCCGGGCGTTTCCGGTCCATGTTAGAGCAGAGGAGGAAACTACCGGCTTGGCAAGAAAGAGAAAACATCCTCGACCTGTTAGACCAGTGTCAGGTGCTGGTTGTCAGCGGGATGACAGGGTGTGGTAAGACCACGCAGATCCCTCAGTTCATTCTGGACGCCTCATTAAATGGTCCAGCGCAGCAGGTGGTCAACATCATCTGTACTCAGCCACGCCGCATCTCTGCCATCTCTGTGGCCCAGAGAGTGGCACAGGAGCGGGCAGAGCGTCTGGGCAACTCAGTGGGCTACCAGATCCGCCTGGAGAGTGTTAGGACGTCGGCCACCAGACTACTCTACTGCACCACAGGTGTGTTACTTAGGAGACTGGAGGGCGAGGCAGACCTCAAAGGCATCACGCACGTCATTGTGGATGAGGTTCACGAGCGAACGGAGGAGAGTGACTTCCTGCTGTTAGTATTAAAAGACCTGATTATGCAGAGGCCAGACCTGAAGATCATTCTAATGAGTGCCACACTTAATGCCAAACTCTTCTCTGAGTATTTCTACGACTGTCCCACTGTCCACATACCAGGTCGTACTTTTCCCGTTGACCAGTTTTTTCTTGAAGATGCCATCGACAAAACCCGGTATGCCATCGAGGATGGCAGCCCTTACATGCGCTCAGGGAAACAGAATTCGTCTTCCACAAGTGGACGAGGGAGAGAGCAAAGGGACATGGTGGACGACTTGGGTGATGACATGTGGAACTTCATGTCTCTTTGTAAGAAGGACTTTGTCAAAGACTCGATTCCAGACCAGCAGCTCAGCCTGCAGGATCTCACGGTCCGATACAAAGATACTAAGAAGTCTGTGCTGAAGACTATTGCTGCAATGGACCTGGACAAGATCAACATGGACCTGGTGGAGAGCCTGCTGGAATGGATTGTAGATGGAAAACATAACTACCCTCCAGGTGCAGTGCTTGTGTTTCTGCCAGGCCTGGCTGAGATCAAGATGTTGTACGAGCAGCTCAAGTCCAACAGAATGTTCAACAACCGAGGCGCAAACAGATGTGAGGTGTACCCACTCCACTCATCATTGTCCAATGAGGAACAGCAGGCAGTTTTCAGCCGGCCCCCGGAGGGTGTCACAAAGATTATCATCTCCACCAACATTGCCGAGACCTCTGTAACCATTGACGACGTGGTATATGTCATCGACTCCGGCAAGATGAAGGAGAAGAGGTACGATGCGACCAAAAGCATGGAGAGCCTGGAGGACTCGTGGGTTTCTCGGGCCAACGCTCTGCAGAGGAAGGGTCGAGCAGGTCGCGTTGCCTCGGGGGTCTGCTTCCACCTCTTCACCAGCCACTGCTTCCAACACCAGCTGGCTGAGCAACAGCTGCCTGAGATCCAGAGAGTGCCTCTCGAGCAGCTCTGCCTCCGAATCAAGATCCTCGACGTGTTTGCAGATCGGACGCTGGAGTCTGTGTTCTCTCGGCTCATCGAGCCCCCAGCTATGGGAAGCTTGGATGCAGCCAAGCAGCGCCTGCGGGACCTTGGAGCTCTAACCGCAGATGAGAAACTGACCCCGCTGGGCTACCACCTGGCCTGCCTGCCCGTCGACGTGCGCATCGGGAAACTCATGCTGTTCGGTGCCATCTTTCGCTGCCTCGACCCAGCACTCACCATCGCTGCCAGTCTGGCCTTCAAATCACCATTTGTGTCTCCATGGGATAAGCGGGAAGAAGCCAATGAGAAGAAACTGGCCTTTGCCCTGGCCAGTAGTGACCATCTAGCTTTGTTACAGGCATACAAGGGATGGTGCTGTGCTGCAAAGAATGGCCACCAGGCCGGCTTCCGTTACTGCAGGGAGAACTTCCTGTCTTGGCGGGGTTTACAGGAGATCGCCAGTCTGAAGAGGCAGTTTGCTGAGCTGCTGTCTGACATTGGCTTCATCAAGGAGGGACTGAGGGCCAGGGTTATAGAGCGCATGTGCTCTAAAGGCACTGATGGTGTTGTGGAGGCCACCGGCCCcgagGCTAACCTGAACTCCGAAAACATCCGGCTGATGTCCGCCATGCTTTGTGCTGCCCTCTATCCCAATGTGGTCCAGGTACGAGCTCCTCAGGGGAATTACAAGATGACCAGCAAAGGAGCGATGAAGATGCAGCCCAAAGCCAACGAGCTCCGCTTCATGACCAAGGACGATGGCTTCGTCCACGTGCACCCCTCCTCTGTCAACTACACAGTTCGCCACTACACTAGCCCCTACCTGGTTTACCACGAGAAGGTGAAGACAAGCCGCATCTTCATCAGGGACTGCAGCATGGTGTCCGTCTACCCGCTGGTGCTGTTTGGAGGCGGGCAGGTCAACATGGAGCTGCACAAGGGAGAGTTTGTCATCTCCCTCGACGATGGATGGATCCGATTTGCTGCCGCTTCTCATCAGGTGGCGGAGCTGGTGAAAGAGCTGCGCTGGGAGCTGGACCAGCTGTTGGAGGACAAAATCAGGAATCCGAGCATGGACCTGTGCAGCTGCCCCCGTGGCTCCCGCATCATCCACATGATAGTCCAACTCATTTCTACACAGTAG

Function

symbol description
dhx57 Predicted to enable RNA binding activity. Orthologous to human DHX57 (DExH-box helicase 57).

NR:

description
PREDICTED: putative ATP-dependent RNA helicase DHX57

GO: NA

KEGG:

id description
K13026 DHX57; ATP-dependent RNA helicase DHX57

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792197.1 True 4524 mRNA 0.54 25 16869736 16880178

Neighbor

gene id symbol gene type direction distance location
LOC120553391 NA coding downstream 1063 16867831 ~ 16868673 (-)
LOC120553389 LOC103371308,LOC102780635,LOC101471206 coding downstream 3542 16854992 ~ 16866194 (-)
LOC120553145 lrrn3,LOC103356442 coding downstream 217603 16635871 ~ 16652133 (-)
ifrd1 ifrd1 coding downstream 540128 16322115 ~ 16329608 (-)
foxp2 foxp2 coding downstream 704831 16059509 ~ 16164905 (-)
strip2 strip2 coding upstream 2633 16882811 ~ 16912629 (-)
ahcyl2b ahcyl2,LOC103371314 coding upstream 37127 16917305 ~ 16964944 (-)
tmem209 tmem209 coding upstream 85393 16965571 ~ 16972447 (-)
prdm4 prdm4,LOC102777312 coding upstream 92354 16972532 ~ 16979035 (-)
sapcd1 NA coding upstream 103725 16983903 ~ 16987555 (-)
G228295 NA non-coding downstream 38497 16824829 ~ 16831239 (-)
G228290 NA non-coding downstream 122696 16746743 ~ 16747040 (-)
G228283 NA non-coding downstream 333443 16536018 ~ 16536293 (-)
G228221 gpr85,LOC106576049 non-coding downstream 645587 16216115 ~ 16224149 (-)
G228120 NA non-coding downstream 1338297 15531131 ~ 15531439 (-)
G228360 NA non-coding upstream 34429 16914607 ~ 16949806 (-)
G228363 NA non-coding upstream 72765 16952943 ~ 17007000 (-)
G228401 NA non-coding upstream 257092 17137270 ~ 17138275 (-)
G228423 NA non-coding upstream 341027 17221205 ~ 17222228 (-)
G228439 kdm5a non-coding upstream 363287 17243465 ~ 17243980 (-)
G228291 LOC103356441,LOC102298269,LOC102212027 other downstream 46304 16748842 ~ 16823432 (-)
G228191 NA other downstream 1077883 15771238 ~ 15791853 (-)
znf800b znf800,LOC103364713,LOC103355189,LOC108412280 other downstream 1779753 15055475 ~ 15089983 (-)
grm8a grm8 other downstream 1816451 14634110 ~ 15053285 (-)
waslb LOC103370764 other downstream 2419147 14424237 ~ 14450589 (-)
slc37a3 slc37a3 other upstream 127546 17007724 ~ 17020735 (-)
G228465 NA other upstream 414944 17295122 ~ 17302198 (-)
tafa5a fam19a5,LOC103356475,LOC102793695 other upstream 950438 17830616 ~ 18100995 (-)
gramd4a gramd4,LOC103376144 other upstream 1483081 18363259 ~ 18421407 (-)
LOC120553633 slc2a13,LOC103369283 other upstream 1858218 18738396 ~ 18823090 (-)

Expression


Co-expression Network