creb3l2 (creb3l2)


Basic Information

Item Value
gene id creb3l2
gene name creb3l2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 6926311 ~ 6962094 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792200.1
AATTAATCTCCAGTGCATTATATTGCATTTATATTATCAGTCGTTCCCGCTTGTGTAGTTTTCTTGAATTTCTGGGCTTGATTTCCCTATTTTCTCAGTTTCTCTGTGACTCCGCCCATGCATTCCTGTGTGtctgagctgtgaggaggaggaggaggaatgaaAAGCAAAGAGAGGCTGCAGAAAGCTGCCTGTGGACGCTGAACCAGCGAGGAGAtgattaacaacaacaacaactctcATCCTCAATCTGACTGCTACAGCTTTCTGACATAACTAACATTTAGCCCCAAAGTCTAAACCAGCTGGACGCGTttctatttcttcttttttcttttcttttataagTCCttgggaacttttttttttttctcccggAGTTGGAGCTGTGGAGTTTGGTTTCCAGTCCGACTGCATTGCAACAAAACCGCCGCCGCTGTTTGCGCTGCTTTTTCTGCCGCAAAATCAACAAGAAAACGAGCCAGAAGAGCCGAGAGAGTCTGCGAGGAGGAAATCATGGAGATCCTCGACAGTAGTGAACCGTTTTTACACTGGGACAGGAACCTCAGCGAGCTGTCCGAGGCTGGAGAGATGGACAGTGTGCTGTACACCAACCACTTCTCCGAGCTCCTCGACGATCTGTCCCAGGATGCTTTGCTGGGCCAGCTGCTCAGCGACCCCTTCCTGTCCGGGGTGAGAGGCGGAGTGGAGGCCATGGAGGGGGAGGACGGGAGCGACCTGTCCCCGTCTTCCCCTCTCCCCCCGCACATCACGGCCGAGCACAGCTACTCGCTCTGCGGGGACAGCCGCCCACAGTCGCCGCTGTCGCACCTGACCGGAGAGCAAGGCAGCGACGCCGCAGAGTCTGATGGGGACTCCGCTGATTGGCCCATGGAGCAGGAGGACGCCATTGACAGCATCCTGTGTGAGactccttccctcctccccaacctctctctctctctggcctcCAGCGCAGGGCCCCAGGCTCCTGAGGGCCCCGGTGTGGCCCCTGATGCTGCCGCGAGCCCACCTCAGACCACCGTCAGCAGCCACAACCAAAGCAAAGGCCTCAAGATCAAAGAGGAGAACATCATCCCCCAGATTAAACTGGAGCCTCATGAAGTGGACCAGTTTCTCAATCTTTCACCCAAAGGTCTGGAGTCGCTGCAGATGCCCCCCACTCCTCCCAGTTCCCTCAGCAGCGACTCTGAGGGCAGTCAGAGCCCTGTCCACGCCCCGCCCGGCCTGTCCTGCCCCACCTCCCCCACCAGCCCTCCTCCATCCCAGGCCGGTCTGAAGGTGTCGCCTCGCGCGGCTTCCTCGCTGTCCAACTCCCCTCTGCTCACCGCTGCTCACaagCTGCAGGGGTCGGGCCCGTTGATGCTGACGGAGGAGGAGCGCCGTACGCTGGTGGCTGAAGGTTACCCGGTCCCCACCAAACTGCCGCTCACCAAATCTGAAGAGAAGGCGCTGAAAAAGATCCGCAGGAAGATCAAAAATAAGatTTCGGCTCAGGAGAGTCGCAGGAAGAAGAAAGAGTACATGGACGCTCTGGAGAAGAAGGTGGAGACCTGCTCCAACGAAAACAACGAGCTGCGCAGGAAAGTGGAAACTCTGGAGTGTACCAACAAGTCTCTGCTACAGCAGCTGCAGTCTCTGCAGGCGGCGGTGGCCGGCAAAGTCCCCAAGTCCTGCAGGATGGCAGGCACCCAGACTTCATCATGCCTAATGGTGGTCGTGTTGTGTTTTGCTCTGTTTTTGGGGAGTTTCTACCCCAGCAGTTTGACTCCATGCTCCACCATCACTGCAACTGGCCTCGCTTCTAAACAGCTGGCTGTCAAAGAGTCCTACACAACCACAGtgaaGTCGAGGAATCTGTTATCAACGTTCGAAGACGAGCAGCCACACCTCCTCGGTCTAGGCGGGGAATATCCCGCCCAATGGGAGGACACGTCGGCTGTCGTCATGGCAGTGTGGCGTCGCTCAGAGCAACAGAAAGTGGCGGAGGTGGAGCCCAACATGGTGGAAACACACCCACCCTTCAGAAATAAAAGCAATGAGACGCAGACATCGAAAAACCTGCTGCTGGACCTGcaaagGTCTCTGGAGCAGAGGACGAAGGAGAGCAGCAGTAAAGTGATAGAGCTGGAGCGAACGGTCAACGAGACCTCCTGAGGTTCAAGTCAACACCCACCCTAAACGCCCCTCCATCCCGGGACCCCACCTCCCTTACACCCCATGATGACCTTTGACAC
>XM_039792201.1
AATTAATCTCCAGTGCATTATATTGCATTTATATTATCAGTCGTTCCCGCTTGTGTAGTTTTCTTGAATTTCTGGGCTTGATTTCCCTATTTTCTCAGTTTCTCTGTGACTCCGCCCATGCATTCCTGTGTGtctgagctgtgaggaggaggaggaggaatgaaAAGCAAAGAGAGGCTGCAGAAAGCTGCCTGTGGACGCTGAACCAGCGAGGAGAtgattaacaacaacaacaactctcATCCTCAATCTGACTGCTACAGCTTTCTGACATAACTAACATTTAGCCCCAAAGTCTAAACCAGCTGGACGCGTttctatttcttcttttttcttttcttttataagTCCttgggaacttttttttttttctcccggAGTTGGAGCTGTGGAGTTTGGTTTCCAGTCCGACTGCATTGCAACAAAACCGCCGCCGCTGTTTGCGCTGCTTTTTCTGCCGCAAAATCAACAAGAAAACGAGCCAGAAGAGCCGAGAGAGTCTGCGAGGAGGAAATCATGGAGATCCTCGACAGTAGTGAACCGTTTTTACACTGGGACAGGAACCTCAGCGAGCTGTCCGAGGCTGGAGAGATGGACAGTGTGCTGTACACCAACCACTTCTCCGAGCTCCTCGACGATCTGTCCCAGGATGCTTTGCTGGGCCAGCTGCTCAGCGACCCCTTCCTGTCCGGGGTGAGAGGCGGAGTGGAGGCCATGGAGGGGGAGGACGGGAGCGACCTGTCCCCGTCTTCCCCTCTCCCCCCGCACATCACGGCCGAGCACAGCTACTCGCTCTGCGGGGACAGCCGCCCACAGTCGCCGCTGTCGCACCTGACCGGAGAGCAAGGCAGCGACGCCGAGTCTGATGGGGACTCCGCTGATTGGCCCATGGAGCAGGAGGACGCCATTGACAGCATCCTGTGTGAGactccttccctcctccccaacctctctctctctctggcctcCAGCGCAGGGCCCCAGGCTCCTGAGGGCCCCGGTGTGGCCCCTGATGCTGCCGCGAGCCCACCTCAGACCACCGTCAGCAGCCACAACCAAAGCAAAGGCCTCAAGATCAAAGAGGAGAACATCATCCCCCAGATTAAACTGGAGCCTCATGAAGTGGACCAGTTTCTCAATCTTTCACCCAAAGGTCTGGAGTCGCTGCAGATGCCCCCCACTCCTCCCAGTTCCCTCAGCAGCGACTCTGAGGGCAGTCAGAGCCCTGTCCACGCCCCGCCCGGCCTGTCCTGCCCCACCTCCCCCACCAGCCCTCCTCCATCCCAGGCCGGTCTGAAGGTGTCGCCTCGCGCGGCTTCCTCGCTGTCCAACTCCCCTCTGCTCACCGCTGCTCACaagCTGCAGGGGTCGGGCCCGTTGATGCTGACGGAGGAGGAGCGCCGTACGCTGGTGGCTGAAGGTTACCCGGTCCCCACCAAACTGCCGCTCACCAAATCTGAAGAGAAGGCGCTGAAAAAGATCCGCAGGAAGATCAAAAATAAGatTTCGGCTCAGGAGAGTCGCAGGAAGAAGAAAGAGTACATGGACGCTCTGGAGAAGAAGGTGGAGACCTGCTCCAACGAAAACAACGAGCTGCGCAGGAAAGTGGAAACTCTGGAGTGTACCAACAAGTCTCTGCTACAGCAGCTGCAGTCTCTGCAGGCGGCGGTGGCCGGCAAAGTCCCCAAGTCCTGCAGGATGGCAGGCACCCAGACTTCATCATGCCTAATGGTGGTCGTGTTGTGTTTTGCTCTGTTTTTGGGGAGTTTCTACCCCAGCAGTTTGACTCCATGCTCCACCATCACTGCAACTGGCCTCGCTTCTAAACAGCTGGCTGTCAAAGAGTCCTACACAACCACAGtgaaGTCGAGGAATCTGTTATCAACGTTCGAAGACGAGCAGCCACACCTCCTCGGTCTAGGCGGGGAATATCCCGCCCAATGGGAGGACACGTCGGCTGTCGTCATGGCAGTGTGGCGTCGCTCAGAGCAACAGAAAGTGGCGGAGGTGGAGCCCAACATGGTGGAAACACACCCACCCTTCAGAAATAAAAGCAATGAGACGCAGACATCGAAAAACCTGCTGCTGGACCTGcaaagGTCTCTGGAGCAGAGGACGAAGGAGAGCAGCAGTAAAGTGATAGAGCTGGAGCGAACGGTCAACGAGACCTCCTGAGGTTCAAGTCAACACCCACCCTAAACGCCCCTCCATCCCGGGACCCCACCTCCCTTACACCCCATGATGACCTTTGACAC

Function

symbol description
creb3l2 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and cAMP response element binding activity. Acts upstream of or within regulation of ER to Golgi vesicle-mediated transport and regulation of extracellular matrix constituent secretion. Predicted to be located in endoplasmic reticulum. Is expressed in cranial cartilage and pectoral fin. Orthologous to human CREB3L2 (cAMP responsive element binding protein 3 like 2).

NR:

description
PREDICTED: cyclic AMP-responsive element-binding protein 3-like protein 2 isoform X1

GO:

id name namespace
GO:0060628 regulation of ER to Golgi vesicle-mediated transport biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0003330 regulation of extracellular matrix constituent secretion biological_process
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K09048 CREB3; cyclic AMP-responsive element-binding protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792200.1 True 2258 mRNA 0.56 12 6926311 6962094
XM_039792201.1 False 2255 mRNA 0.56 12 6926311 6962094

Neighbor

gene id symbol gene type direction distance location
dgki NA coding downstream 5699 6840140 ~ 6920612 (-)
LOC120553692 NA coding downstream 94599 6824521 ~ 6831712 (-)
rassf3 rassf3,LOC102298244,LOC102210289,LOC103364097,LOC106956171,LOC103129390 coding downstream 102406 6747501 ~ 6823905 (-)
zgc:194209 LOC103375033,LOC102787798,LOC102205194,LOC101467670 coding downstream 180326 6736606 ~ 6745985 (-)
tbc1d30 tbc1d30,LOC102788373 coding downstream 208367 6690574 ~ 6717944 (-)
ssbp1 ssbp1,LOC102786007 coding upstream 1182 6963276 ~ 6974561 (-)
c23h12orf56 NA coding upstream 69118 7031212 ~ 7048093 (-)
eri1 eri1,LOC103356631,LOC102785739 coding upstream 191706 7153800 ~ 7160787 (-)
tmcc3 tmcc3 coding upstream 200912 7163006 ~ 7208199 (-)
ndufa12 ndufa12 coding upstream 251302 7213396 ~ 7216409 (-)
G226216 NA non-coding downstream 66 6924031 ~ 6926245 (-)
G226199 NA non-coding downstream 191041 6732438 ~ 6735270 (-)
LOC120553101 NA non-coding downstream 237489 6634650 ~ 6688822 (-)
G226113 NA non-coding downstream 483987 6442038 ~ 6442324 (-)
G226083 NA non-coding downstream 1092097 5833734 ~ 5834214 (-)
G226244 NA non-coding upstream 66654 7028748 ~ 7028958 (-)
G226259 NA non-coding upstream 102531 7064625 ~ 7072997 (-)
G226273 NA non-coding upstream 139844 7101938 ~ 7107207 (-)
LOC120553545 NA non-coding upstream 140418 7102512 ~ 7105702 (-)
LOC120553544 NA non-coding upstream 143643 7105737 ~ 7107199 (-)
G226200 gns other downstream 195529 6730307 ~ 6730782 (-)
LOC120553807 LOC104934913 other downstream 1663259 5242890 ~ 5263052 (-)
cpm cpm,LOC106925010 other downstream 2143552 4756921 ~ 4782759 (-)
LOC120553649 NA other downstream 2386514 4529987 ~ 4539797 (-)
G225751 NA other downstream 2875120 4047316 ~ 4051191 (-)
tmem243b tmem243 other upstream 111799 7073893 ~ 7086322 (-)
meig1 meig1 other upstream 124850 7086944 ~ 7089168 (-)
usp44 usp44,LOC102783730 other upstream 306943 7269037 ~ 7278324 (-)
LOC120553151 LOC107386793,LOC104950937 other upstream 460071 7422165 ~ 7494307 (-)
G226495 LOC103356655,LOC105934024 other upstream 926477 7888571 ~ 7891311 (-)

Expression


Co-expression Network