pus7l (pus7l)


Basic Information

Item Value
gene id pus7l
gene name pus7l
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 15360929 ~ 15368119 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792289.1
GTGACGCGGAACTAGATTGAATTGTTTCAGCGTTGTTGTGTTTACATCAACAGCTCCTCGTTTACATACCGCGTGCAGGTTCGTTGAGTAAACAAACACAACAAGAACACGTGAGAACTCTGCAGTGTTTGGATGAAGTGACCATGAAGCAGGACAGTGATGCTGTGAACGTCCCTGCGTGCTTCATATCAAACCATGAAGGTTTTCTTGGAAGCATAAAAAACTTTATCAAAGACTTTGTGGTGACTGAGATAGACATCACTGGACAGCGTGttaacacagcagcagcagcagcagcagccgccacACAGACACCAGACTGGGCCTCCTcagataaaaacaatgaaagcAGTGCAGAATGTAAGTGGAATAATTATTCCTTAGTCTCACAGGACACTGATGTTTCAGCTGATTGTGGGTTAGATGTCACTATACCCAGTCCAGGCAGTTTTGATTTAAGTGTGATTTTAGGTCAGCCAGTCAGCGAAGAGCTTGAGCAGTTTGTGTTGACTCTCAAAGAAAAGCCCACCAAGCAGGAGCTCTCTCTTGGATCCTTTGCTGACAAACACCACAGAGCTAACGTCCACCGGGCCGTCAGACACCGCTTTCCCTTCCTCATGACTGTCACTATTCAGCCTGAGATCAGGGTGAGGGAAGACCCAGACTACAGAGAGCTCTCCCAGCTGGTTACAGAGGACGAAGCAGAGGACTTCTTCAGGTTCATAGATGCCAAAGTGCGAGGCTCATCCTATATGTTTGGACCTGATAACGATAAGGAGCACAGGACGGCGGTCCACCACTTCCTGAGCCGAAGGTTTGGCAAACTGGTGGAGACTAAAAGCTTCACAGACCAGGGGACAACAGCCATCTCGGTTAGGCTGAGAGAGCAAGGGAGGCCGAAGAAAAGAACCGCAGAGGAAcgtaaagaagaagaagtttacACTGCTTTCACTCTGAGAAAGGAGAACCTGGAGACTCTGGAGGCCATCAGCTACATGGCAGCCGCTCTCGGGGTCCTACCGTCAGATTTCACTTACGCTGGGATCAAGGATAAGAGAGCCATCACCTACCAGTCTATGGTGGTCAAGAAGGTCTCAACTCAACGGTTGAAAGAGAAGACAGCTGAGTTTGAGAAGAGAGGGATGCGTCTGTCTCAGATCCGCTCTGTCAGCGAGCCTCTCAGGCTTGGACGACTGCAGGGGAACCACTTTGACCTGGTGGTCCGCGACCTGAGACCACACAGTGACGCACACTCCTCTGgagcagacaaacacactcGCCTGGCAGTGCTGGTAAAGGAAGCAGTGGAGAATGTCAAgGCCAGAGGTTTTGTCAACTACTATGGACCACAGAGGTTTGGGAATGCACAGAGCGTTCAGTCCGACTGTGTAGGACTAGCTTTACTCAAAGAAGACATGgtgAACGCTGTGCGTCTCTTCTTCACTCCAGAGGACAGCAATGATCCTCAGAGCCATGCTAAGAGACACTTCCTCCAAACAGATAACGCTAAGGAGTCTTTGGCGCTGATGCCATTGTCGAAAGCCAGGGAGCGGCTGATGCTTCGGGCCCTGAACCGCTACGGTACAGGTCCGGATGGTTGTACCCAAGCTTGGCTCAGCCTGCCCCACAGTATGAGAGTCTTCTACCCACACGCCTACTGCAGCAGAGTGTGGAACGAGGCAGTGGCACACAGGCTGACTACTCTGGGCCACAGTGCCAGGCAAGGAGACCTGGTGTGGGTGAAGGAAGGCACAGGAGAGAACAGCTCGGCTCAGATCCATGTGGTGACGGACCAAGAGGAGCAAGAGGAAGTGTACACACTGGGACATGTGTTACTACCGATGCCAGGAAACACTGTCAAGTATCCAGAAAACGCCATGGGGACTTGGTTCCAGGAGAGACTGGCCAGGGACGGACTGGACGCCTGTCGCTTCAGAGTCAGCAACCTCAAACTAAATCTGCCTGGCTGCTACCGCCCCCTGCTGGCTTTACCACGCAACCTCAGCTACCAGCTGCAGAGAGCAGCCtgtggggagggaggaggagaggggacagGAAACTGCAGTAGAAATAGTGACAGGCAGCTTAATGGCACAACAGTAGAAGGGAAGCAGGACTTGCTCACTCTCACCTTAAACTTGGACCTGGACTCCTCCTGCTACGCTACTATCTGTCTCAGAGAGATCATGAAGTGTGACCCTTAAGGGCAAGGGACGTTGGTCCTGTTGTGTTTCTACATACTTTGCAGAAGAGAAGGAGTTttcttgtttttagtttttgtaaCCCATCATTGTGATACAGTATTAGTAGCTTTTTGGTTTGTTGTTGAAGTAATGAGCATAAGACTGTGTTTATAAATGGAAAAAATATGCATAATGTGCAATTGATAAAACAAACGAACAAATCTAAATGTAAAAGCGTGTAAAcggtgtctgtgttttgtgccATGAATAAAACCTTTAGAAATAAA
>XM_039792290.1
CATGACGGTCACGTGACGCGGAACTAGATTGAATTGTTTCAGCGTTGTTGTGTTTACATCAACAGCTCCTCGTTTACATACCGCGTGCAGCAACAAGAACACGTGAGAACTCTGCAGTGTTTGGATGAAGTGACCATGAAGCAGGACAGTGATGCTGTGAACGTCCCTGCGTGCTTCATATCAAACCATGAAGGTTTTCTTGGAAGCATAAAAAACTTTATCAAAGACTTTGTGGTGACTGAGATAGACATCACTGGACAGCGTGttaacacagcagcagcagcagcagcagccgccacACAGACACCAGACTGGGCCTCCTcagataaaaacaatgaaagcAGTGCAGAATGTAAGTGGAATAATTATTCCTTAGTCTCACAGGACACTGATGTTTCAGCTGATTGTGGGTTAGATGTCACTATACCCAGTCCAGGCAGTTTTGATTTAAGTGTGATTTTAGGTCAGCCAGTCAGCGAAGAGCTTGAGCAGTTTGTGTTGACTCTCAAAGAAAAGCCCACCAAGCAGGAGCTCTCTCTTGGATCCTTTGCTGACAAACACCACAGAGCTAACGTCCACCGGGCCGTCAGACACCGCTTTCCCTTCCTCATGACTGTCACTATTCAGCCTGAGATCAGGGTGAGGGAAGACCCAGACTACAGAGAGCTCTCCCAGCTGGTTACAGAGGACGAAGCAGAGGACTTCTTCAGGTTCATAGATGCCAAAGTGCGAGGCTCATCCTATATGTTTGGACCTGATAACGATAAGGAGCACAGGACGGCGGTCCACCACTTCCTGAGCCGAAGGTTTGGCAAACTGGTGGAGACTAAAAGCTTCACAGACCAGGGGACAACAGCCATCTCGGTTAGGCTGAGAGAGCAAGGGAGGCCGAAGAAAAGAACCGCAGAGGAAcgtaaagaagaagaagtttacACTGCTTTCACTCTGAGAAAGGAGAACCTGGAGACTCTGGAGGCCATCAGCTACATGGCAGCCGCTCTCGGGGTCCTACCGTCAGATTTCACTTACGCTGGGATCAAGGATAAGAGAGCCATCACCTACCAGTCTATGGTGGTCAAGAAGGTCTCAACTCAACGGTTGAAAGAGAAGACAGCTGAGTTTGAGAAGAGAGGGATGCGTCTGTCTCAGATCCGCTCTGTCAGCGAGCCTCTCAGGCTTGGACGACTGCAGGGGAACCACTTTGACCTGGTGGTCCGCGACCTGAGACCACACAGTGACGCACACTCCTCTGgagcagacaaacacactcGCCTGGCAGTGCTGGTAAAGGAAGCAGTGGAGAATGTCAAgGCCAGAGGTTTTGTCAACTACTATGGACCACAGAGGTTTGGGAATGCACAGAGCGTTCAGTCCGACTGTGTAGGACTAGCTTTACTCAAAGAAGACATGgtgAACGCTGTGCGTCTCTTCTTCACTCCAGAGGACAGCAATGATCCTCAGAGCCATGCTAAGAGACACTTCCTCCAAACAGATAACGCTAAGGAGTCTTTGGCGCTGATGCCATTGTCGAAAGCCAGGGAGCGGCTGATGCTTCGGGCCCTGAACCGCTACGGTACAGGTCCGGATGGTTGTACCCAAGCTTGGCTCAGCCTGCCCCACAGTATGAGAGTCTTCTACCCACACGCCTACTGCAGCAGAGTGTGGAACGAGGCAGTGGCACACAGGCTGACTACTCTGGGCCACAGTGCCAGGCAAGGAGACCTGGTGTGGGTGAAGGAAGGCACAGGAGAGAACAGCTCGGCTCAGATCCATGTGGTGACGGACCAAGAGGAGCAAGAGGAAGTGTACACACTGGGACATGTGTTACTACCGATGCCAGGAAACACTGTCAAGTATCCAGAAAACGCCATGGGGACTTGGTTCCAGGAGAGACTGGCCAGGGACGGACTGGACGCCTGTCGCTTCAGAGTCAGCAACCTCAAACTAAATCTGCCTGGCTGCTACCGCCCCCTGCTGGCTTTACCACGCAACCTCAGCTACCAGCTGCAGAGAGCAGCCtgtggggagggaggaggagaggggacagGAAACTGCAGTAGAAATAGTGACAGGCAGCTTAATGGCACAACAGTAGAAGGGAAGCAGGACTTGCTCACTCTCACCTTAAACTTGGACCTGGACTCCTCCTGCTACGCTACTATCTGTCTCAGAGAGATCATGAAGTGTGACCCTTAAGGGCAAGGGACGTTGGTCCTGTTGTGTTTCTACATACTTTGCAGAAGAGAAGGAGTTttcttgtttttagtttttgtaaCCCATCATTGTGATACAGTATTAGTAGCTTTTTGGTTTGTTGTTGAAGTAATGAGCATAAGACTGTGTTTATAAATGGAAAAAATATGCATAATGTGCAATTGATAAAACAAACGAACAAATCTAAATGTAAAAGCGTGTAAAcggtgtctgtgttttgtgccATGAATAAAACCTTTAGAAATAAA
>XM_039792291.1
GACGCGGAACTAGATTGAATTGTTTCAGCGTTGTTGTGTTTACATCAACAGCTCCTCGTTTACATACCGCGTGCAGCAGGTACAGCTCTCTGTCAGCACAGTCGAGCAACAAGAACACGTGAGAACTCTGCAGTGTTTGGATGAAGTGACCATGAAGCAGGACAGTGATGCTGTGAACGTCCCTGCGTGCTTCATATCAAACCATGAAGGTTTTCTTGGAAGCATAAAAAACTTTATCAAAGACTTTGTGGTGACTGAGATAGACATCACTGGACAGCGTGttaacacagcagcagcagcagcagcagccgccacACAGACACCAGACTGGGCCTCCTcagataaaaacaatgaaagcAGTGCAGAATGTAAGTGGAATAATTATTCCTTAGTCTCACAGGACACTGATGTTTCAGCTGATTGTGGGTTAGATGTCACTATACCCAGTCCAGGCAGTTTTGATTTAAGTGTGATTTTAGGTCAGCCAGTCAGCGAAGAGCTTGAGCAGTTTGTGTTGACTCTCAAAGAAAAGCCCACCAAGCAGGAGCTCTCTCTTGGATCCTTTGCTGACAAACACCACAGAGCTAACGTCCACCGGGCCGTCAGACACCGCTTTCCCTTCCTCATGACTGTCACTATTCAGCCTGAGATCAGGGTGAGGGAAGACCCAGACTACAGAGAGCTCTCCCAGCTGGTTACAGAGGACGAAGCAGAGGACTTCTTCAGGTTCATAGATGCCAAAGTGCGAGGCTCATCCTATATGTTTGGACCTGATAACGATAAGGAGCACAGGACGGCGGTCCACCACTTCCTGAGCCGAAGGTTTGGCAAACTGGTGGAGACTAAAAGCTTCACAGACCAGGGGACAACAGCCATCTCGGTTAGGCTGAGAGAGCAAGGGAGGCCGAAGAAAAGAACCGCAGAGGAAcgtaaagaagaagaagtttacACTGCTTTCACTCTGAGAAAGGAGAACCTGGAGACTCTGGAGGCCATCAGCTACATGGCAGCCGCTCTCGGGGTCCTACCGTCAGATTTCACTTACGCTGGGATCAAGGATAAGAGAGCCATCACCTACCAGTCTATGGTGGTCAAGAAGGTCTCAACTCAACGGTTGAAAGAGAAGACAGCTGAGTTTGAGAAGAGAGGGATGCGTCTGTCTCAGATCCGCTCTGTCAGCGAGCCTCTCAGGCTTGGACGACTGCAGGGGAACCACTTTGACCTGGTGGTCCGCGACCTGAGACCACACAGTGACGCACACTCCTCTGgagcagacaaacacactcGCCTGGCAGTGCTGGTAAAGGAAGCAGTGGAGAATGTCAAgGCCAGAGGTTTTGTCAACTACTATGGACCACAGAGGTTTGGGAATGCACAGAGCGTTCAGTCCGACTGTGTAGGACTAGCTTTACTCAAAGAAGACATGgtgAACGCTGTGCGTCTCTTCTTCACTCCAGAGGACAGCAATGATCCTCAGAGCCATGCTAAGAGACACTTCCTCCAAACAGATAACGCTAAGGAGTCTTTGGCGCTGATGCCATTGTCGAAAGCCAGGGAGCGGCTGATGCTTCGGGCCCTGAACCGCTACGGTACAGGTCCGGATGGTTGTACCCAAGCTTGGCTCAGCCTGCCCCACAGTATGAGAGTCTTCTACCCACACGCCTACTGCAGCAGAGTGTGGAACGAGGCAGTGGCACACAGGCTGACTACTCTGGGCCACAGTGCCAGGCAAGGAGACCTGGTGTGGGTGAAGGAAGGCACAGGAGAGAACAGCTCGGCTCAGATCCATGTGGTGACGGACCAAGAGGAGCAAGAGGAAGTGTACACACTGGGACATGTGTTACTACCGATGCCAGGAAACACTGTCAAGTATCCAGAAAACGCCATGGGGACTTGGTTCCAGGAGAGACTGGCCAGGGACGGACTGGACGCCTGTCGCTTCAGAGTCAGCAACCTCAAACTAAATCTGCCTGGCTGCTACCGCCCCCTGCTGGCTTTACCACGCAACCTCAGCTACCAGCTGCAGAGAGCAGCCtgtggggagggaggaggagaggggacagGAAACTGCAGTAGAAATAGTGACAGGCAGCTTAATGGCACAACAGTAGAAGGGAAGCAGGACTTGCTCACTCTCACCTTAAACTTGGACCTGGACTCCTCCTGCTACGCTACTATCTGTCTCAGAGAGATCATGAAGTGTGACCCTTAAGGGCAAGGGACGTTGGTCCTGTTGTGTTTCTACATACTTTGCAGAAGAGAAGGAGTTttcttgtttttagtttttgtaaCCCATCATTGTGATACAGTATTAGTAGCTTTTTGGTTTGTTGTTGAAGTAATGAGCATAAGACTGTGTTTATAAATGGAAAAAATATGCATAATGTGCAATTGATAAAACAAACGAACAAATCTAAATGTAAAAGCGTGTAAAcggtgtctgtgttttgtgccATGAATAAAACCTTTAGAAATAAA

Function

symbol description
pus7l Predicted to enable pseudouridine synthase activity. Predicted to be involved in pseudouridine synthesis. Predicted to act upstream of or within RNA modification. Predicted to be active in nucleus. Orthologous to human PUS7L (pseudouridine synthase 7 like).

NR:

description
PREDICTED: pseudouridylate synthase 7 homolog-like protein

GO:

id name namespace
GO:0001522 pseudouridine synthesis biological_process
GO:0003723 RNA binding molecular_function
GO:0009982 pseudouridine synthase activity molecular_function

KEGG:

id description
K06176 truD, PUS7; tRNA pseudouridine13 synthase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792289.1 False 2470 mRNA 0.50 10 15360941 15368119
XM_039792290.1 False 2462 mRNA 0.50 10 15360929 15368119
XM_039792291.1 True 2478 mRNA 0.50 11 15360943 15368119

Neighbor

gene id symbol gene type direction distance location
LOC120553796 LOC104934096,LOC103355199 coding upstream 15204 15338839 ~ 15345725 (+)
fgl2a fgl2 coding upstream 104606 15246158 ~ 15256323 (+)
LOC120553461 NA coding upstream 606679 14750780 ~ 14754250 (+)
lmod2b lmod2 coding upstream 939970 14413543 ~ 14420959 (+)
asb15b LOC103373124 coding upstream 947914 14397723 ~ 14413015 (+)
zcrb1 zcrb1 coding downstream 123164 15491283 ~ 15493423 (+)
gxylt1b gxylt1,LOC103355206,LOC103459445 coding downstream 143730 15511849 ~ 15521235 (+)
akap14 NA coding downstream 391192 15759311 ~ 15759832 (+)
avpr2l LOC103369361,LOC104965399,LOC107098425 coding downstream 394674 15762793 ~ 15764738 (+)
LOC120553452 NA coding downstream 401893 15770012 ~ 15772705 (+)
G228065 NA non-coding upstream 70421 15290187 ~ 15290508 (+)
G227995 nampt,LOC102790888 non-coding upstream 194720 15154129 ~ 15166209 (+)
G227969 NA non-coding upstream 215731 15141212 ~ 15145198 (+)
G227972 znf800,LOC102791911 non-coding upstream 300095 15060004 ~ 15060834 (+)
G227970 NA non-coding upstream 303451 15054705 ~ 15057478 (+)
G228119 NA non-coding downstream 163012 15531131 ~ 15531439 (+)
G228128 cntn1 non-coding downstream 309236 15677355 ~ 15680269 (+)
G228130 NA non-coding downstream 312254 15680373 ~ 15681491 (+)
G228136 NA non-coding downstream 321789 15689908 ~ 15699902 (+)
LOC120553205 NA non-coding downstream 353405 15721524 ~ 15722242 (+)
lrrc17 LOC103355197,LOC103382847 other upstream 29751 15300522 ~ 15331178 (+)
LOC120553256 gsap,LOC102790605 other upstream 157888 15168604 ~ 15203041 (+)
LOC120553353 spam1,LOC103370765,LOC102199515,LOC101470336,LOC102310263 other upstream 898455 14454593 ~ 14462474 (+)
LOC120553485 tmem60,LOC101486292,LOC104924613,LOC103382814,LOC100699021 other upstream 1356024 14002132 ~ 14004905 (+)
trnal-caa_22 NA other upstream 1558726 13802093 ~ 13802203 (+)
prickle1b prickle1 other downstream 73866 15441985 ~ 15471887 (+)
yaf2 yaf2,LOC102236902 other downstream 126558 15494677 ~ 15511178 (+)
tmem168a LOC103368481 other downstream 899017 16267136 ~ 16280061 (+)
cald1a LOC102212027,LOC102781594,LOC102298269,LOC103382882,LOC106941466,LOC103156466,LOC101472471,LOC106916645,LOC106525550,LOC107395349,LOC103356441 other downstream 1402939 16771058 ~ 16831243 (+)
stmp1 NA other downstream 1498191 16866310 ~ 16867796 (+)

Expression


Co-expression Network