def6c (LOC103371612)


Basic Information

Item Value
gene id def6c
gene name LOC103371612
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 10165497 ~ 10174114 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792304.1
GTATGCCTTCTGAAGTTGATAACACGGATCCGTcttatttgttttttggttGGCAGCACTTGAGGAATTAAAACACCCTGTAGACTGGATACATGTCTTAGACTTGGACATTTAGCTCTTTGCACAGCAGCCTGTACTCTGCCCCACATTTTATTTGGCAATTCTCACCACCACTCGCTCGCTCGTCGCTGCGTAAAAGCCGCTGCGCTGCTCTTGGAAATGTAGTTTTTTCGCACAGCGAGGTCTCTCCAAAATGGATTTAAAATCCGAACTCCTCAAGTCGATCTGGTACGCCTTCACATCTCTGGACGTCGAGAAATGCGGGAAAGTGTCCAAATCGCAGTTAAAGgtgCTTTCCCACAACCTGTACACAGTGCTGAACATCCCACATGACCCAGTGGCTCTGGAGGAGCACTTCCAGGATGACGATGATGGGCCGGTGTCTAATCATGGCTACATGCCCTACCTCAACAAATATATACTGGATAAGgTCAAAGAGGGCATGTTTGATAAGGAGAAGTTCGACGACCTGTGCTGGATGATGACCAGAAAGAAGAACTTCAAGGGTGTACCACAGGGGGCGCCGCTATCGGAAAGAGACTGTTTTAAGCTCTTCTGTTTATTTAACCTCCTGTCTGAGGACCGCTACCCGCTGGTGATGATACCAGAGGAGGTGGAGTATCTCCTCAAGAAAATTTCCACAGCGATGAGCCAGGAGTGGGATGGGAAGCCATTGGAGGACTTAATATCCCAGGATCCCACAGTGCGGGATGATGACATGTCTGTATGGACCTTCCTGGAGAACATGGCTGCAGGCCGGCTGCTAAGGGTCACCAGCGCTGAGGCCttcagtctggctttgaatgaGGTCTTTCTGGAGATGTATCACAATGTCCTCAAGAGGGGTTATATGTGGAAAAAGGGGCATGTACGCAGGAACTGGACTGAGCGTTGGTTTGTGCTGAAGCCCTCCTCTGTGACTTACTACGTCAGCGAGGACTTGAAAGACAAGAAAGGGGAGATCCAGCTGAATAAGGGCTGTGTCATAGAGaCTATTCCAGACAGGGAAGGGAAGCGCTGTTTGTTCTGTGTGAAAACCCACAACAAAACCTTTGAGATGAGTGCGTCTGACCAGAGGCAGAAGGTGGAGTGGACTCAAGCTATTCAGACAGCTCTCCGTCTCCAGAGCGAGGGCAAGTCTTCACTTCACCAAGAACTGAAATTGAAGAGGCGGGTCCAGCGGGAACACAGCAACCGGGAGCGCAGCCGGAGCGCCcggagcagctgcagcagccggAGCAGCCAATCGGACGACTCCAATATCCAAGAGATGGagaagatggagaaagagaaagacagacaggattTAGAAATAGAAAGTATCATACAGCATGCACGCGAATTAGAAACCAGACGAAGGGAGGCagaggaaaaagaaaggaggaaaCAGAGGGAGGTGCAGATGGAGTTGGAGAGGCAGCTGAAGGAGGCCGAGACGTTGAGAGACAGCATGCAGGCAGAGATGCAGGAGAAGGAAAAGGAGGCTGAGCAACAGAAGAAGAGGATCCAGGAGTTGGAGCTGACGCAGCAGAAACTGGAGGCTGCTCTCAACATGGAGATCCAGGCTcggctggaggaggagagggccAGACAGGAACTGGAAAGGTTGCTGCAGGAGGAAGAAGCGAAGAAGAAGCAGTTCCAGCTCCTCCAGGAGCAGCAGAGGGCATTGGAGTGCCTCAACACCATAATGGAGGCCTCAGACGGCAGTCAAGACCAGAACAGCCCCTCAGCTCTTCACTCGGCCTCTCAGGAGCTCCAGGATCTGCAGGCCTCTCGCCAGAGGAGCCACCAGCACCTGGAGGAGGTACAAGAGAAGCTGAGATATGCCAGTCAACACGTACGACACTGGAACGTCCAGCTGAACCGCCTGATGACACCCATCAGTCCTGGAGaaCGTTTGGGAAATCGCCTTACATCAAAACCCATGTGTCCCAAAAAGGAGGGAGCGCTGGCCAGCAATGAGTTCATCTCTAAATTCAAGATAAGAGCTGATCAAAACAACCAGATATCGGAAGACAGCGAGACGCTGGAGGAGCAGCTGGAGGCTGCAAACCTGTCAGACGGAGCAGAAAAATCACAGGGAAAACCCAACGGACAAATGTGATTACCATGTTGACGGTTTTAAATCCACAAGTTCAAATTTGATAAAAGAAATTCTTCATTTGTTTAAGACCGAGAGTGGAAAGTGAAaagttatttacaatacataaaataatctGTGCAAAAtacgttttatatttatattttgaaatGCAGACTAAGATGGACAGTGAGGATGAAACACACATTGTGATGCAGGATttaatgaaaacacatttgACAGATCAACTGAGATACAGTTTTGTACAATAAAGTTAATTGGTGAATGataaaatgtca
>XM_039792305.1
GTGGATGGTAAGGCAATTAGCCAATATGTTTGGGGAGAATAGCGTAAACCAGACTACTCAGGGTGTTTGACATTTGTAAAATCGTATATTGTATTATCTTGAATAATGTATTATGGAGGAAAGTGTAGGTATTTATCTCTACTCTCCGCCTCTTTAAGGCTCTCCTACATCTGACTCCTTTTGGTCTTTCGCAGTTTGCACAGCAGCCTGTACTCTGCCCCACATTTTATTTGGCAATTCTCACCACCACTCGCTCGCTCGTCGCTGCGTAAAAGCCGCTGCGCTGCTCTTGGAAATGTAGTTTTTTCGCACAGCGAGGTCTCTCCAAAATGGATTTAAAATCCGAACTCCTCAAGTCGATCTGGTACGCCTTCACATCTCTGGACGTCGAGAAATGCGGGAAAGTGTCCAAATCGCAGTTAAAGgtgCTTTCCCACAACCTGTACACAGTGCTGAACATCCCACATGACCCAGTGGCTCTGGAGGAGCACTTCCAGGATGACGATGATGGGCCGGTGTCTAATCATGGCTACATGCCCTACCTCAACAAATATATACTGGATAAGgTCAAAGAGGGCATGTTTGATAAGGAGAAGTTCGACGACCTGTGCTGGATGATGACCAGAAAGAAGAACTTCAAGGGTGTACCACAGGGGGCGCCGCTATCGGAAAGAGACTGTTTTAAGCTCTTCTGTTTATTTAACCTCCTGTCTGAGGACCGCTACCCGCTGGTGATGATACCAGAGGAGGTGGAGTATCTCCTCAAGAAAATTTCCACAGCGATGAGCCAGGAGTGGGATGGGAAGCCATTGGAGGACTTAATATCCCAGGATCCCACAGTGCGGGATGATGACATGTCTGTATGGACCTTCCTGGAGAACATGGCTGCAGGCCGGCTGCTAAGGGTCACCAGCGCTGAGGCCttcagtctggctttgaatgaGGTCTTTCTGGAGATGTATCACAATGTCCTCAAGAGGGGTTATATGTGGAAAAAGGGGCATGTACGCAGGAACTGGACTGAGCGTTGGTTTGTGCTGAAGCCCTCCTCTGTGACTTACTACGTCAGCGAGGACTTGAAAGACAAGAAAGGGGAGATCCAGCTGAATAAGGGCTGTGTCATAGAGaCTATTCCAGACAGGGAAGGGAAGCGCTGTTTGTTCTGTGTGAAAACCCACAACAAAACCTTTGAGATGAGTGCGTCTGACCAGAGGCAGAAGGTGGAGTGGACTCAAGCTATTCAGACAGCTCTCCGTCTCCAGAGCGAGGGCAAGTCTTCACTTCACCAAGAACTGAAATTGAAGAGGCGGGTCCAGCGGGAACACAGCAACCGGGAGCGCAGCCGGAGCGCCcggagcagctgcagcagccggAGCAGCCAATCGGACGACTCCAATATCCAAGAGATGGagaagatggagaaagagaaagacagacaggattTAGAAATAGAAAGTATCATACAGCATGCACGCGAATTAGAAACCAGACGAAGGGAGGCagaggaaaaagaaaggaggaaaCAGAGGGAGGTGCAGATGGAGTTGGAGAGGCAGCTGAAGGAGGCCGAGACGTTGAGAGACAGCATGCAGGCAGAGATGCAGGAGAAGGAAAAGGAGGCTGAGCAACAGAAGAAGAGGATCCAGGAGTTGGAGCTGACGCAGCAGAAACTGGAGGCTGCTCTCAACATGGAGATCCAGGCTcggctggaggaggagagggccAGACAGGAACTGGAAAGGTTGCTGCAGGAGGAAGAAGCGAAGAAGAAGCAGTTCCAGCTCCTCCAGGAGCAGCAGAGGGCATTGGAGTGCCTCAACACCATAATGGAGGCCTCAGACGGCAGTCAAGACCAGAACAGCCCCTCAGCTCTTCACTCGGCCTCTCAGGAGCTCCAGGATCTGCAGGCCTCTCGCCAGAGGAGCCACCAGCACCTGGAGGAGGTACAAGAGAAGCTGAGATATGCCAGTCAACACGTACGACACTGGAACGTCCAGCTGAACCGCCTGATGACACCCATCAGTCCTGGAGaaCGTTTGGGAAATCGCCTTACATCAAAACCCATGTGTCCCAAAAAGGAGGGAGCGCTGGCCAGCAATGAGTTCATCTCTAAATTCAAGATAAGAGCTGATCAAAACAACCAGATATCGGAAGACAGCGAGACGCTGGAGGAGCAGCTGGAGGCTGCAAACCTGTCAGACGGAGCAGAAAAATCACAGGGAAAACCCAACGGACAAATGTGATTACCATGTTGACGGTTTTAAATCCACAAGTTCAAATTTGATAAAAGAAATTCTTCATTTGTTTAAGACCGAGAGTGGAAAGTGAAaagttatttacaatacataaaataatctGTGCAAAAtacgttttatatttatattttgaaatGCAGACTAAGATGGACAGTGAGGATGAAACACACATTGTGATGCAGGATttaatgaaaacacatttgACAGATCAACTGAGATACAGTTTTGTACAATAAAGTTAATTGGTGAATGataaaatgtca
>XM_039792306.1
gttttttggttGGCAGCACTTGAGGAATTAAAACACCCTGTAGACTGGATACATGTCTTAGACTTGGACATTTAGCTCgtgCTTTCCCACAACCTGTACACAGTGCTGAACATCCCACATGACCCAGTGGCTCTGGAGGAGCACTTCCAGGATGACGATGATGGGCCGGTGTCTAATCATGGCTACATGCCCTACCTCAACAAATATATACTGGATAAGgTCAAAGAGGGCATGTTTGATAAGGAGAAGTTCGACGACCTGTGCTGGATGATGACCAGAAAGAAGAACTTCAAGGGTGTACCACAGGGGGCGCCGCTATCGGAAAGAGACTGTTTTAAGCTCTTCTGTTTATTTAACCTCCTGTCTGAGGACCGCTACCCGCTGGTGATGATACCAGAGGAGGTGGAGTATCTCCTCAAGAAAATTTCCACAGCGATGAGCCAGGAGTGGGATGGGAAGCCATTGGAGGACTTAATATCCCAGGATCCCACAGTGCGGGATGATGACATGTCTGTATGGACCTTCCTGGAGAACATGGCTGCAGGCCGGCTGCTAAGGGTCACCAGCGCTGAGGCCttcagtctggctttgaatgaGGTCTTTCTGGAGATGTATCACAATGTCCTCAAGAGGGGTTATATGTGGAAAAAGGGGCATGTACGCAGGAACTGGACTGAGCGTTGGTTTGTGCTGAAGCCCTCCTCTGTGACTTACTACGTCAGCGAGGACTTGAAAGACAAGAAAGGGGAGATCCAGCTGAATAAGGGCTGTGTCATAGAGaCTATTCCAGACAGGGAAGGGAAGCGCTGTTTGTTCTGTGTGAAAACCCACAACAAAACCTTTGAGATGAGTGCGTCTGACCAGAGGCAGAAGGTGGAGTGGACTCAAGCTATTCAGACAGCTCTCCGTCTCCAGAGCGAGGGCAAGTCTTCACTTCACCAAGAACTGAAATTGAAGAGGCGGGTCCAGCGGGAACACAGCAACCGGGAGCGCAGCCGGAGCGCCcggagcagctgcagcagccggAGCAGCCAATCGGACGACTCCAATATCCAAGAGATGGagaagatggagaaagagaaagacagacaggattTAGAAATAGAAAGTATCATACAGCATGCACGCGAATTAGAAACCAGACGAAGGGAGGCagaggaaaaagaaaggaggaaaCAGAGGGAGGTGCAGATGGAGTTGGAGAGGCAGCTGAAGGAGGCCGAGACGTTGAGAGACAGCATGCAGGCAGAGATGCAGGAGAAGGAAAAGGAGGCTGAGCAACAGAAGAAGAGGATCCAGGAGTTGGAGCTGACGCAGCAGAAACTGGAGGCTGCTCTCAACATGGAGATCCAGGCTcggctggaggaggagagggccAGACAGGAACTGGAAAGGTTGCTGCAGGAGGAAGAAGCGAAGAAGAAGCAGTTCCAGCTCCTCCAGGAGCAGCAGAGGGCATTGGAGTGCCTCAACACCATAATGGAGGCCTCAGACGGCAGTCAAGACCAGAACAGCCCCTCAGCTCTTCACTCGGCCTCTCAGGAGCTCCAGGATCTGCAGGCCTCTCGCCAGAGGAGCCACCAGCACCTGGAGGAGGTACAAGAGAAGCTGAGATATGCCAGTCAACACGTACGACACTGGAACGTCCAGCTGAACCGCCTGATGACACCCATCAGTCCTGGAGaaCGTTTGGGAAATCGCCTTACATCAAAACCCATGTGTCCCAAAAAGGAGGGAGCGCTGGCCAGCAATGAGTTCATCTCTAAATTCAAGATAAGAGCTGATCAAAACAACCAGATATCGGAAGACAGCGAGACGCTGGAGGAGCAGCTGGAGGCTGCAAACCTGTCAGACGGAGCAGAAAAATCACAGGGAAAACCCAACGGACAAATGTGATTACCATGTTGACGGTTTTAAATCCACAAGTTCAAATTTGATAAAAGAAATTCTTCATTTGTTTAAGACCGAGAGTGGAAAGTGAAaagttatttacaatacataaaataatctGTGCAAAAtacgttttatatttatattttgaaatGCAGACTAAGATGGACAGTGAGGATGAAACACACATTGTGATGCAGGATttaatgaaaacacatttgACAGATCAACTGAGATACAGTTTTGTACAATAAAGTTAATTGGTGAATGataaaatgtca

Function

NR:

description
PREDICTED: differentially expressed in FDCP 6 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792304.1 False 2442 mRNA 0.49 13 10165497 10174114
XM_039792305.1 True 2518 mRNA 0.49 12 10165651 10174114
XM_039792306.1 False 2171 mRNA 0.49 12 10165537 10174114

Neighbor

gene id symbol gene type direction distance location
LOC120553731 LOC105357099,LOC107105006,LOC108233212,LOC103459183 coding upstream 3843 10160731 ~ 10161654 (+)
foxm1 foxm1 coding upstream 17926 10140782 ~ 10147571 (+)
LOC120553300 NA coding upstream 48870 10108319 ~ 10116627 (+)
LOC120553783 LOC104962829,LOC102309285,LOC102208629,LOC100697441,LOC102795594,LOC101464871 coding upstream 57696 10104931 ~ 10107801 (+)
LOC120553071 NA coding upstream 61892 10100696 ~ 10103605 (+)
LOC120553550 mcat,LOC102779964 coding downstream 1029 10175143 ~ 10183282 (+)
ttll1 ttll1,LOC102779306 coding downstream 13304 10187418 ~ 10197239 (+)
trnay-gua_57 NA coding downstream 18212 10192326 ~ 10192412 (+)
trnay-gua_58 NA coding downstream 20316 10194430 ~ 10194516 (+)
trnay-gua_59 NA coding downstream 21006 10195120 ~ 10195206 (+)
LOC120553125 NA non-coding upstream 228904 9934175 ~ 9936593 (+)
G226930 LOC104947167 non-coding upstream 297412 9867575 ~ 9868085 (+)
G226921 mtpn non-coding upstream 338972 9796473 ~ 9826525 (+)
G226922 NA non-coding upstream 358895 9806242 ~ 9806602 (+)
G226918 NA non-coding upstream 411381 9751944 ~ 9754116 (+)
G227088 NA non-coding downstream 364082 10538196 ~ 10538689 (+)
G227107 tcp11l2,LOC102777109 non-coding downstream 451332 10625446 ~ 10627982 (+)
G227108 NA non-coding downstream 454694 10628808 ~ 10630212 (+)
G227116 NA non-coding downstream 491595 10665709 ~ 10667280 (+)
G227139 NA non-coding downstream 531796 10705910 ~ 10709545 (+)
ndufb2 ndufb2,LOC102790702 other upstream 924148 9237226 ~ 9241349 (+)
lhfpl3 lhfpl3,LOC101483460 other upstream 992277 9134594 ~ 9173220 (+)
rps16 rps16,LOC103382554 other upstream 1732800 8426635 ~ 8432697 (+)
LOC120553156 LOC104945813 other upstream 2596194 7566655 ~ 7569303 (+)
LOC120553154 LOC104945813,LOC103356648 other upstream 2633420 7525892 ~ 7532077 (+)
G227121 kera other downstream 523140 10697254 ~ 10699718 (+)
G227141 dcn,LOC103382665 other downstream 557955 10732069 ~ 10737503 (+)
impdh1b LOC104968094,LOC103355171,LOC102293685,LOC102194436,LOC104918784 other downstream 774171 10948285 ~ 10986201 (+)
G227216 NA other downstream 928722 11102836 ~ 11112905 (+)
G227278 LOC104928793 other downstream 1515055 11689169 ~ 11757317 (+)

Expression


Co-expression Network