LOC120553673


Basic Information

Item Value
gene id LOC120553673
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 17208626 ~ 17220357 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792327.1
AAAGCCCACAAGGTAAGATCTGTGTCGCCTCTCCTGCTGCTCTGAAGGAGATGCTCTCTCTACTTGACGGGTGGATTTTACACGGAGGAGACGCACACCGTCCGCTGCTGCAATCCATCCGCTGTTCATCCTTTGCCCATTTCATATACACCTTTGCCATTTAGACGATCGGAGAGCGGAACATTTGAAAAGCGGGTCCGATGGCACAGTGGACAATACTTGTGTTGTCTTTATACGGAGTTCTGCATGGACAAGAGATTCAGCTTCCTACTATACAAAAGTGCTGTCAGGATGGGATGACTCGGGCCCAGAATGGACAAGTCTGTACAATCCTCCCGCTCATCTCCTCCTCCCACATCTGCATGATCGCCCAGGAGCAGTGCTGTGCAGCAGCAGTAAGAGACCAACTCTGTGACAGTGGCATGGAGATGGCCAAGGGACAAGGGGCCTGTGAGAGGCCCTTCTTCGAAGGAGATCCCTGGGAAACCAAAATCTCTAAGATGTGTTGTGACTGCTGTATGCTCGGCCTGATGATGGCAAGCGAGGGTTTGAGCTGTGAGCTCCAGGGTTTGTTGCTGGGGAGATGGTGTGCGTACCCAGCTAAAACCTGCTGTggcaaaaacacaacagaggaAACCGAACCAAGTACTATTGTGACAGAAAAGCTTGAGGCCGGAGTTACCGTTACCGACATGCCTCCTGAGGGATTGATCCCCTGTAGAGACTCCAATTGCTCCCAGTTGTGTGTAGGTGATGGTTTATGTGCTTGCTTTGGTGGTTATCAACTGCAAAATGATGGAGTGACTTGTGAGGATGTTAACGAGTGTTTGAATGGCGGTCACAACTGCGTCCTCGGCCAAGTTTGCATCAACACAGAGGGTTCCTTTCGCTGTCAGAGGGAAAGCAGCTGTGGCACCGGGTATGAACTCAGAGATGACAACAATTGCCAAGACATTAACGAGTGCACTTTGGGGACCCATAACTGTGGAGCAGAATTTGTGTGCACCAACACAGAGGGCTCGTTCCGCTGCCACCCAAAGGAGAGGTGCTCAGGCGGTTTCCTTCAGGACGCCATCGGCAGCTGTATTGACATAAACGAGTGTGTGGCCCATACCAGTCCATGCCTGCCTGGCCAGACGTGTATCAACACAGTGGGCTCCTACACCTGTCACAGAAACATAGTCACCTGTGGACGCGGCTATCATCTGACTGAGGACGGCACGCGTTGTGAAGATGTGGATGAGTGTCGTACAGGGAACGTGTGCGTCAACCACGGTTGTGTCAACCTGGTAGGCTTTTACCGCTGTGAATGCAGAACTGGCTTCATCTTCAACATTATCACCAAACTGTGTGATGACATCAATGAGTGCAGGGATTATCCCGGGCGACTCTGCACCCACAAGTGTGAGAACACAGAGGGGTCCTACAAGTGCAGCTGCACCCTTGGCTTCAAGCTGTCCCAGGACGGCAGAAACTGTGAAGATGTCGATGAGTGTGAAGCCAACCCTTGCAGCCAGGAGTGTTCAAATGTCTATGGCTCATACCAGTGCTACTGTCGCCGTGGTTACCAGCTGAGTGACAACGATGGGATAACATGTGAAGATATTGATGAGTGTGCTCTGCCTACTGGAGGTAATGTGTGTTCCTACCGCTGCTCCAACGCCCCGGGAAGTTTTTACTGTACCTGCCCACCCACAGGCTACACACTTTCACACAATGGACGCACATGTCTAGACATTGATGAATGTGCAGCTGGTAGACATACCTGTTCTGTCTCCGAGAGCTGCTTCAATGTCCAGGGAGGATTTCGCTGTCTGTCCTTTTCATGTCCTCCAAACTTCCGGGTAGCAGCACAAGGATCCAAACAAGATGCTTCAGTCAATCTGCGTTGTAGTAAGGCCTGCCAAGCTTATGACATCAACTGTAATCGCGACACCTCCCACCTCATCACCTACACCTCCATCTCTCTGCCAACCTTCAGAGACTTCAGTAAACCAGAAGAAATCATTTTCCTGCAGACAATTACGGCAGATAACCCTGCTCCTCTCCCCGGAGCCACCAGTATTTTCTTTGACATCCTGGCTGCAGATGAACAGTTCTCTTTTGACGTTGAGAAGCGCTCCCACAAGGGCATGATTATGGGTGTGGTTCGGCAGGTGAAACCTATCACTGGCCCCAGGGACTTTGAGTTGAAGGTGGCTATGAACTATGTCAAGTCAGGGGTCATTACCCATAGCAACGCTGTCATCATCCATGTCTTCATCTCAGAGTTTTGGTTCTGAGGGAGGGAACGATACTCCATCAGCAATACAACACATAACGTGGCAAATATAGTTTTTAATATCTGGAGGACGCCACACTTgctgaacatttaaaaacaccTCAAATGTTAATGCTGTTGCACGCAAGATGAGATCATTtcatttgcaaatgttttagaTGTACTGAAAACAGTTACAGAAGCAGTTTGTGACCCATCCAGGTAATTAGTTTACAATTAGGTCTTTGTAATTTTCAACACAATatacacatattattattattataccggTAAGACAAGAACACAAAAAGATACCggactttgatttgatttgatttgattaggatccccattagctgatgcaGAACATCAGCTCCTCTTCCTGTGTGACATTGTTCTTTCTTGCAACTATAACTATACATATTCCTCTTCTTATACTCTTATAAATATTACACTAAATACATAAGCACTGAATATAGAAAAGTTAAATCTTACAGCATCTttgtatacatataaatattcttatacataaaaagtacaaaagtagtTACAAAATATGGTTACAGGCTTAGGGCCCTTagatttagattagattagactaAGAGCCATGCTGGCAGCTCTGTACTttggcacagtggtgctttgagcttcATGCTAATTTAAGCACGCTTACATGCTCATTTCCTCATTTTAGtcagttagcatgctaacatttgctaatttgcACAAAAAACAAGCTGAGGATCATGGGAACGTCATTACGGTTTATTCAGAAACCTAAGTATTAGAAAAGGTGAAAATTTGACCTGGTGGTGGCATTGGATGGTCAGGGGATCTCCAAAGTTATTAGGATACACCATGTGtcaaccatgaatgtctgtaccaaatttttGCCAATCTATctgatagttgttgagatatttaagTGGTGGTGGACTGACCAACCAACCAACATCGTAAAACTTTATAGAGCCATGTCGCTAACATGGctaaaaagttatttttcactCATAAAAATACTAATTTCTCACTTGATACCCCAGATGTGAgaagttacatttaaaaaaagtaatgtaaTAGATAAACAGTGTGCCCTTATCTCCCTAATTTGTATACCGTGTTTAACTTGAATTCAGACTTTGTTGTCATGAGTGCCACTGTAATAGACTGTTGGTTCATTTCGTTTTGAACGACCAGATGTGACATGCTTCATTTGATAATAAAAAGCTTAATCTACA
>XM_039792328.1
GCAAAGCCCACAAGGTAAGATCTGTGTCGCCTCTCCTGCTGCTCTGAAGGAGATGCTCTCTCTACTTGACGGGTGGATTTTACACGGAGGAGACGCACACCGTCCGCTGCTGCAATCCATCCGCTGTTCATCCTTTGCCCATTTCATATACACCTTTGCCATTTAGACGATCGGAGAGCGGAACATTTGAAAAGCGGGTCCGATGGCACAGTGGACAATACTTGTGTTGTCTTTATACGGAGTTCTGCATGGACAAGAGATTCAGCTTCCTACTATACAAAAGTGCTGTCAGGATGGGATGACTCGGGCCCAGAATGGACAAGTCTGTACAATCCTCCCGCTCATCTCCTCCTCCCACATCTGCATGATCGCCCAGGAGCAGTGCTGTGCAGCAGCAGTAAGAGACCAACTCTGTGACAGTGGCATGGAGATGGCCAAGGGACAAGGGGCCTGTGAGAGGCCCTTCTTCGAAGGAGATCCCTGGGAAACCAAAATCTCTAAGATGTGTTGTGACTGCTGTATGCTCGGCCTGATGATGGCAAGCGAGGGTTTGAGCTGTGAGCTCCAGGGTTTGTTGCTGGGGAGATGGTGTGCGTACCCAGCTAAAACCTGCTGTggcaaaaacacaacagaggaAACCGAACCAAGTACTATTGTGACAGAAAAGCTTGAGGCCGGAGTTACCGTTACCGACATGCCTCCTGAGGGATTGATCCCCTGTAGAGACTCCAATTGCTCCCAGTTGTGTGTAGGTGATGGTTTATGTGCTTGCTTTGGTGGTTATCAACTGCAAAATGATGGAGTGACTTGTGAGGATGTTAACGAGTGTTTGAATGGCGGTCACAACTGCGTCCTCGGCCAAGTTTGCATCAACACAGAGGGTTCCTTTCGCTGTCAGAGGGAAAGCAGCTGTGGCACCGGGTATGAACTCAGAGATGACAACAATTGCCAAGACATTAACGAGTGCACTTTGGGGACCCATAACTGTGGAGCAGAATTTGTGTGCACCAACACAGAGGGCTCGTTCCGCTGCCACCCAAAGGAGAGGTGCTCAGGCGGTTTCCTTCAGGACGCCATCGGCAGCTGTATTGACATAAACGAGTGTGTGGCCCATACCAGTCCATGCCTGCCTGGCCAGACGTGTATCAACACAGTGGGCTCCTACACCTGTCACAGAAACATAGTCACCTGTGGACGCGGCTATCATCTGACTGAGGACGGCACGCGTTGTGAAGATGTGGATGAGTGTCGTACAGGGAACGTGTGCGTCAACCACGGTTGTGTCAACCTGGTAGGCTTTTACCGCTGTGAATGCAGAACTGGCTTCATCTTCAACATTATCACCAAACTGTGTGATGACATCAATGAGTGCAGGGATTATCCCGGGCGACTCTGCACCCACAAGTGTGAGAACACAGAGGGGTCCTACAAGTGCAGCTGCACCCTTGGCTTCAAGCTGTCCCAGGACGGCAGAAACTGTGAAGATGTCGATGAGTGTGAAGCCAACCCTTGCAGCCAGGAGTGTTCAAATGTCTATGGCTCATACCAGTGCTACTGTCGCCGTGGTTACCAGCTGAGTGACAACGATGGGATAACATGTGAAGATATTGATGAGTGTGCTCTGCCTACTGGAGGTAATGTGTGTTCCTACCGCTGCTCCAACGCCCCGGGAAGTTTTTACTGTACCTGCCCACCCACAGGCTACACACTTTCACACAATGGACGCACATGTCTAGACATTGATGAATGTGCAGCTGGTAGACATACCTGTTCTGTCTCCGAGAGCTGCTTCAATGTCCAGGGAGGATTTCGCTGTCTGTCCTTTTCATGTCCTCCAAACTTCCGGGTAGCAGCACAAGGCCGTTGCGAGCGATTAACTTGCGAGGTCACGCAGGATCCTGCGTCGTGTTTCTTGCTCCCGCTGAGAATCTCCTTTTACAACATCAGCTTCCCCACCAACACTCCCATCCCCGCTGATGTTTTTAGGATGGGACCCTCCAATTTCGTGCCGGGTGACAATATGCAGATCAACATAGTCTCCGGTGACGAGGAGGGATACTTCCTCGTGCAGCAGCATGCTCATGGAGGAGAGATCTCACTGCGCCGTACCTTAACCCAGCCCCGGGACTTTATCCTGACCGTGGAGATGAGGCTGATTCGCTACGGGATGGCACATCTGTACATGGCCAAGATTGCTGTGTTTGTCACGCACGAGCAGCCCATCTGGCCCTCAAGAACATTTCCATATTAGAAGGCTGTGAAATTAATTTGGAGGGTTTTAAGTCTATCCCTATTTTGTCCTCACCACTGCTCTTATTACATTGTTGGATTTCATTTTCATctatctttttctttatttaggaGTTACAGCTCCAGGCTTCCATCTACTCCTCAATACAGTTAATATGGGCCATATCTATAATTCACCCATAGCTATAATGATGCTACAGCAGTTTGTTATGGTGAATTTGAGTGtttattcaacaacaaaaatcgaTTTATTGGTATAGCTAAATAAAGTGCCATCTTTTCTTTTCAGCATCCATCTGAGATAATTGATAGCACTCTCATGTTTGTATGCTGAAAATGAAGCTTCAACAATCAGCAGCCGGCTAGCTTAGTTAAGCacaatgtagtctatatccactacGTTGCGTATTCCTGTATCATAGAGTAAAATAATTGATTTTACAGTAAATGATTGGTTATCAAGGCAAAAAGTTACAATTGTTAATTGAATTGCATTTGTATATGTAATATGGTCTTGGGGATGCATTTCTTTAAGCAATACATTGTTTTTCAGCTTGTTATACTTT

Function

GO: NA

KEGG:

id description
K17307 FBLN1_2; fibulin 1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792327.1 True 3498 mRNA 0.45 17 17208626 17220355
XM_039792328.1 False 2816 mRNA 0.48 15 17212648 17220357

Neighbor

gene id symbol gene type direction distance location
atxn10 atxn10 coding downstream 1172 17196941 ~ 17207454 (-)
pparaa ppara coding downstream 73496 17116753 ~ 17135130 (-)
cdpf1 cdpf1 coding downstream 92173 17114008 ~ 17116453 (-)
LOC120553682 NA coding downstream 96183 17109537 ~ 17112443 (-)
sapcd1 NA coding downstream 221071 16983903 ~ 16987555 (-)
trim24 LOC103366983 coding upstream 1977 17222334 ~ 17234693 (-)
LOC120553454 LOC104933464,LOC108241015,LOC102202158 coding upstream 85866 17306223 ~ 17331378 (-)
creld2 creld2 coding upstream 345214 17565571 ~ 17570648 (-)
zbed4 zbed4,LOC102794369 coding upstream 355781 17576138 ~ 17583883 (-)
tbc1d22a tbc1d22a,LOC106927306,LOC103356476 coding upstream 913727 18134084 ~ 18270751 (-)
G228401 NA non-coding downstream 70351 17137270 ~ 17138275 (-)
G228363 NA non-coding downstream 201626 16952943 ~ 17007000 (-)
G228360 NA non-coding downstream 258820 16914607 ~ 16949806 (-)
G228295 NA non-coding downstream 377387 16824829 ~ 16831239 (-)
G228290 NA non-coding downstream 461586 16746743 ~ 16747040 (-)
G228423 NA non-coding upstream 848 17221205 ~ 17222228 (-)
G228439 kdm5a non-coding upstream 23108 17243465 ~ 17243980 (-)
G228474 NA non-coding upstream 52591 17272948 ~ 17275477 (-)
LOC120552976 NA non-coding upstream 181891 17402248 ~ 17402832 (-)
G228522 NA non-coding upstream 297306 17517663 ~ 17600185 (-)
slc37a3 slc37a3 other downstream 187891 17007724 ~ 17020735 (-)
G228291 LOC103356441,LOC102298269,LOC102212027 other downstream 385194 16748842 ~ 16823432 (-)
G228191 NA other downstream 1416773 15771238 ~ 15791853 (-)
znf800b znf800,LOC103364713,LOC103355189,LOC108412280 other downstream 2118643 15055475 ~ 15089983 (-)
grm8a grm8 other downstream 2155341 14634110 ~ 15053285 (-)
G228465 NA other upstream 74765 17295122 ~ 17302198 (-)
tafa5a fam19a5,LOC103356475,LOC102793695 other upstream 610259 17830616 ~ 18100995 (-)
gramd4a gramd4,LOC103376144 other upstream 1142902 18363259 ~ 18421407 (-)
LOC120553633 slc2a13,LOC103369283 other upstream 1518039 18738396 ~ 18823090 (-)
sox5 sox5 other upstream 1808252 19028609 ~ 19270336 (-)

Expression


Co-expression Network