LOC120553694 (ikbip)


Basic Information

Item Value
gene id LOC120553694
gene name ikbip
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 10235016 ~ 10241505 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792382.1
attaattaattaaccgATTAACTGTTTGAGCTTCTCCTTTTAAAGACATCATTAATCCGGTATGGCCACATTCAGGACTAAATAATGCTGGCAGCCGCTTACGTGGCTGAGGCGTTTAAGGGGCTTCTTTCGCCTGTCGGAACTATGAGAGTTTAGGTTGGGGCCTAACGATTGAACAAATTGGCAAACGCAACTGAAAATTGTAATGTTGTTTCAAACCATTGTGTGGCATGAGCTAAAAGATAAAACATCAATATATTTCATACATCAATACTGGCTATATTTGTTACAGGTTTTGTGTTTCTAACTAAGTAATCATGTTGGTTATTGTATATACGAGCTTAAGAGAAGCATTTGAAGGCGGCATTTATCCAAGGAACAGGGTAACGTTAAGCAAAAGGATTGTTTTAGCGGTAACGTTCGCAAAACTCAGCCGttattttctcttaatacatccatggttattTTAATGCTTTTTACGTTACTTTAGTATCCTGCATTATGAACGTATCTGTGAAAGAATTGTTTTATTGCACAACGTAACgaatagcttcttttttttttttactgttaaaGCCTGTTGAATTCCTTCATAGTAAAAGTTACAGTGTGCTAAAATGCCTACTGAGTTAAAACAGAGGAAGAAGTCACAAAAACAAAGCGATGAAGTGTCCGAAACGTCGGCTGTAAATGGCAAAGATGAAGCGCAGAAAGGGAAGACAGAAGCTGGAAACAACGCAGGAGCGAATAAAACCTCTTCGAGTTTGGATATTAGAAGTATAATGTGCTTATTGTCGCTTGCAGCATGCGGGGCTCTGAGTTGGGTGGTGCTACAGCAAAATGAAAGGTTTTCCGAAATTGAAGAAAAGTACAAGTCATTACACGGAAAGACTTCAAGTCTCTTCGACATGGAGGAAGAAGTCCTAAAGGTTTCTAAAAAGCTCGCCGCCTCTGAGGATGACCTACAGGAGGCGCTCTCCACCGTCTCCTTGGCAACACGACTCCAGCAGGACATCTCCACCCTCCACGCTGCCGTCATGGTGATGCAGGCCGACGAGAACTCCGCCTCCCGTGACCTGCAGACGGTCAACGCCCACTTCCTCAACGTGACGGAGACGTGGCAGGAGCGGCTGGCCGCCATCACCTCTGACCTGGCTGCCCTCAAGGCCGAGTCACGGGAAGCTCACGGCGGAGCCACAGAGCAGGTTAACGAGGCCGAGCGGAGGGCCCGGTCACTGGCGGAGAAGTTGGAGGAGCTTGAGGACAGCACGAAGAGGAATGCCCGAGCTCTGGAGCGCACGGAGGGAGACGACACCAAGCGAATTCAGGATCACCTGGACTGGAACACCAAGCAGATCCACAAACTGGAGGAGCAGATCGGCAGCCTGACCAAGAGCGAGGCCGAGCTCAGCTCCCAGCTCCAGGAGCACATTCCCCGGGCACAGGAGTGTGAAGAGCACCTGCCTCAGGTGGAGGAGGCGGTGCGCACCATCCTGAGGCTGGCGGGTGATCTGAGCGGGGCAGAAAAACGCCTGGAAGAGGTGACGCTACAGGTGTTTGGGACTGAGGACAGCATGCTGAAAGCACTCAATGAAATCATTCAGATCAGACAGGAGCTGGACACCCTGCAGGCTCAAAACAGCATCCTGAAGATGAAGAATGAGTTGTCCGTGGTTAAAGAGGCTGTCCGTGAACTCACCATGGTGCTAAGGGAAACTACAGCCGACAGCCAAAAGGACTCTGACactttggaggaagaagaatggAAATATGATGATGaggaagtggaggaggaggagtgggaaAAAGATGAGACAACTCAACTTCTACATGATGACCTCACTGAATAATGTCATTGTATTGAGTCCCCTAGAGAAAAGGAGTGGCCCTGTTTTACTCTTTGCTGTAAAATGGCGATCAAAGTTCAGTATTAATGTCTTTCAAAATGTGTACCTGCGTTTAATGTCAGACAATTGGTGACCATCATTCCATAAAAGTTCCCTGATTTCAACATAAACTCTGGTATACATGCACTGTATCACTAAAGTAAgatcaagatttttttttattttaatattagttTAATGTGGTAGTGACAAATTTAGGTTTCTTTAGTGATTGTATACTACATGTCCcattacatattatatattacatatagtTGTACAACCATATCTAAGCCAGTCTTTCCAGATATAACTGCATTAGATCAGAAACGATTAGTCGATGAATCAATTTCATGACATCGCCTTGATAAAACATCATGGGCATTTTTCACAATTACTGACATTCTTGTAGACTAAatgaataattgattaatcaagaaaataattgtgagttgcagccctaaactaCATCTCTGTCAGTGTTAGATTTGGTACATGAACAGCTTTTGTAGATGTGCAATAAAGCTTAATGTTTTTGATAACTATTATATTTCAATCTGATTTTGGTTTCACCTGTTGAAAGCATGGCAATCATTTCATCACTGAACTTATTTAATAAAATCTTTTTTATTGAAAA
>XM_039792383.1
TAACTGTTTGAGCTTCTCCTTTTAAAGACATCATTAATCCGGTATGGCCACATTCAGGACTAAATAATGCTGGCAGCCGCTTACGTGGCTGAGGCGTTTAAGGGGCTTCTTTCGCCTGTCGGAACTATGAGAGTTTAGGTTGGGGCCTAACGATTGAACAAATTGGCAAACGCAACTGAAAATTGTAATGTTGTTTCAAACCATTGTGTGGCATGAGCTAAAAGATAAAACATCAATATATTTCATACATCAATACTGGCTATATTTGTTACAGGTTTTGTGTTTCTAACTAAGTAATCATGTTGGTTATTGTATATACGAGCTTAAGAGAAGCATTTGAAGGCGGCATTTATCCAAGGAACAGGGTAACGTTAAGCAAAAGGATTGTTTTAGCGGTAACGTTCGCAAAACTCAGCCGttattttctcttaatacatccatggttattTTAATGCTTTTTACGTTACTTTAGTATCCTGCATTATGAACGTATCTGTGAAAGAATTGTTTTATTGCACAACGTAACgaatagcttcttttttttttttactgttaaaGCCTGTTGAATTCCTTCATAGTAAAAGTTACAGTGTGCTAAAATGCCTACTGAGTTAAAACAGAGGAAGAAGTCACAAAAACAAAGCGATGAAGTGTCCGAAACGTCGGCTGTAAATGGCAAAGATGAAGCGCAGAAAGGGAAGACAGAAGCTGGAAACAACGCAGGAGCGAATAAAACCTCTTCGAGTTTGGATATTAGAAGTATAATGTGCTTATTGTCGCTTGCAGCATGCGGGGCTCTGAGTTGGGTGGTGCTACAGCAAAATGAAAGGTTTTCCGAAATTGAAGAAAAGTACAAGTCATTACACGGAAAGACTTCAAGTCTCTTCGACATGGAGGAAGAAGTCCTAAAGGTTTCTAAAAAGTGTGAGAGCGTCCAGCTGATGCTGGAGGGTCTCGGGGGTCAGCGGGGGGCTCTGCGGCCCCAGCTGGAGGGTCTGGAGCAGGACGTGAGCCGGCTGAAGGAGTGGGCCTCTGGGCTGAATGAGAAACGAGCTCAGCTTCAGACCAGCCTGACCTCACTGAGAGACGCTGTGGGACAGATCGAAGGGCGCACCTCAGCCATCGCAAAAGACTTAGCCAACAAGGTGGCGTCAGTGAGGACAGATGTGCGCAGGATGGACGGCCTGCAGTCTGAGCTGGAGTCTCTGCTGACTCAGCTGGCGGCGCTGGACGACAAGACCACGCAGGTGGAGCAAAGCATGGTCAAACGCATCGGGGACGTGCTGGTCAGCAGCATTGACCGGGTCTCAAATCTCCGCGCCGTGTCCGAACGCAACACTGAGGCCATAGAGCAGCTCCGCAGGCGCATCCCTGAACTCACCGCCGCTGACAAACAGATCTCGGAGCGCTTGAGAGAGCTAGAGAGCGGCAGAGCTCGTCTGATAAGAACAGTGACTTTTGCCAGCGACCTTAAACCAAAAGTTGCTGCTATTAAGAGGGACTTTGGGGCGTTTGAGCCTCAGCTGTCAGACCTGACTCTGCGGATAGGAAGACTAGCAGAGGATCTTAtgaagagagagcaggaggttGCTGAGCTTAGACAGACACTGGCTAACCTCACTGCAGTAGAGGGAGATTTAAGTGTTACAACTAAACAGGTCAGTGAAATAGCTGACATGTCTGATATTGGAGAGATGCACCGGCCAACATGAGGAACACACTTCTTCAACAACCTCCAGATCAAGGTTTTCTTCTTTTGGATTTTTCTCAGCAATTACATCTGTCATACTACTGTTTAAAGattttactgaaataaatcttttcattacaaattaaataaatgaaaccct

Function

symbol description
ikbip Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human IKBIP (IKBKB interacting protein).

NR:

description
PREDICTED: inhibitor of nuclear factor kappa-B kinase-interacting protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792382.1 True 2523 mRNA 0.43 3 10235016 10239349
XM_039792383.1 False 1850 mRNA 0.46 4 10235034 10241505

Neighbor

gene id symbol gene type direction distance location
arfgap3 arfgap3 coding upstream 360 10226629 ~ 10234656 (+)
pacsin2 pacsin2 coding upstream 9114 10200774 ~ 10225902 (+)
ttll1 ttll1,LOC102779306 coding upstream 37777 10187418 ~ 10197239 (+)
uhrf1bp1l NA coding downstream 8253 10249758 ~ 10284100 (+)
anks1b anks1b coding downstream 46972 10288477 ~ 10522237 (+)
depdc4 depdc4 coding downstream 397083 10638588 ~ 10643771 (+)
scyl2 NA coding downstream 406816 10648321 ~ 10659011 (+)
si:dkeyp-38g8.5 NA coding downstream 430543 10672048 ~ 10674051 (+)
LOC120553125 NA non-coding upstream 298423 9934175 ~ 9936593 (+)
G226930 LOC104947167 non-coding upstream 366931 9867575 ~ 9868085 (+)
G226921 mtpn non-coding upstream 408491 9796473 ~ 9826525 (+)
G226922 NA non-coding upstream 428414 9806242 ~ 9806602 (+)
G226918 NA non-coding upstream 480900 9751944 ~ 9754116 (+)
G227088 NA non-coding downstream 296691 10538196 ~ 10538689 (+)
G227107 tcp11l2,LOC102777109 non-coding downstream 383941 10625446 ~ 10627982 (+)
G227108 NA non-coding downstream 387303 10628808 ~ 10630212 (+)
G227116 NA non-coding downstream 424204 10665709 ~ 10667280 (+)
G227139 NA non-coding downstream 464405 10705910 ~ 10709545 (+)
ndufb2 ndufb2,LOC102790702 other upstream 993667 9237226 ~ 9241349 (+)
lhfpl3 lhfpl3,LOC101483460 other upstream 1061796 9134594 ~ 9173220 (+)
rps16 rps16,LOC103382554 other upstream 1802319 8426635 ~ 8432697 (+)
LOC120553156 LOC104945813 other upstream 2665713 7566655 ~ 7569303 (+)
LOC120553154 LOC104945813,LOC103356648 other upstream 2702939 7525892 ~ 7532077 (+)
G227121 kera other downstream 455749 10697254 ~ 10699718 (+)
G227141 dcn,LOC103382665 other downstream 490564 10732069 ~ 10737503 (+)
impdh1b LOC104968094,LOC103355171,LOC102293685,LOC102194436,LOC104918784 other downstream 706780 10948285 ~ 10986201 (+)
G227216 NA other downstream 861331 11102836 ~ 11112905 (+)
G227278 LOC104928793 other downstream 1447664 11689169 ~ 11757317 (+)

Expression


Co-expression Network