LOC120553730 (LOC103358107,LOC100702291,LOC101477928)


Basic Information

Item Value
gene id LOC120553730
gene name LOC103358107,LOC100702291,LOC101477928
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 8927072 ~ 8932977 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792424.1
CTGATAGCGGAGGCTTTTCGTAGACTGCTGACCTGAGACACAGGACACCAGAAGCTCCCTCAGCTCCCTCTTCATCGAATACAGCAAACCTGCACTTGTGGAGGGAGTGTGATCATGTTCTAGCACCCTCCTGTGGCACATAAGGATATGGTGATCTCAATCTGCCAGGCTGTGGTCACTTGTGTGCCCCTTCTGTGGATGGTAAGAGTGACTGATGGGATGCCCGACCCTGCTCAGAGGGACCTGCTGATGCGTCAGGAGGCGTCCAGACAGACGGGAGGCCAGGTGATGCTGACGGTGGCTGAGCAGAAGCTGGACGCTTACCTCCATCGATTAAAGGAGCAAGAGATGTCTGCTGCACAGTTCCCCCCAGCTATCCACTTCTTCAAAGCAAAGCCTCTCATCCAGAAGAGTCCAATCTTCAAACTGCTGCAGAAGATGCCTAAAGGTGCAGCCCTCCACATCCACACCTCCTCTATGGTCGGTGTTGAATGGCTGGTGAAAAACGTCACCTACAGGCCTCACTGCTACATCTGCTTCAACTGGGACAACTCGGTCCGCTTCTTGTTCTCTGAGCGCCAGCCGTTTCCACGATGGGACTGCTTCTATGGCAGCTGCTTGAGACATTGAGAGCCCAAATAGGAGACCCTACAGGCTTTGATAACAGTTTAATGAAGCAGCTCACGCTGTTCACTGAGGATCCGGATGGAGAGTACCCGAGCCAAGAGGttgtgtgggagaagtttgagAAAGCCTTCATCGCAGCTGCTGGGCTCATCACCCATGCCCCTGTGCTGAGGGACTACTTCTATAAGGGCCTAGAGGAGCTTCTCCATGACAACATCATGTATCTGGAATTCAGGAGCGGTCTCTCAAGGACGTATGAGCTTGATGGAACCATTCACGATAAGGTGTGGACTCTGAAAACATTTCAAGACGTTACAAGGAAATTTATAGCAGATCACCTGGACTTTCTTGGGGCTCGTGTCATCATTTCTGTGCACAGGGCTCTGAGTGTATCGGAGGTCAAAGCAGCTGTAAAAGAGGCCATCCAGCTGCAAAAGGACTTCCCAGATGTTGTTGCAGGATTTGACATGGTTGGCAGGGAGGACAGTGGGAGGTCTCTTTGGTACTTTAGGGAGGCACTTTCTATGCCAGCTGAACTGGGTGTCACTCTGCCATACTTCTTTCACGCAGGGGAAACAGATGATGATGGCACCAACGTAGATCAAAACATTCTTGACGCCCTTCTGTTCAACACGACACGTATCGGGCACGGCTATGCTTTGGCACACCATCCACTTGCCAAAGAGCTATCTCGGAAAAGAAACGTGGCTGTGGAACTGTGCCCCATCTCAAACCAGGTCAGATAA

Function

NR:

description
PREDICTED: adenosine deaminase CECR1-A-like

GO:

id name namespace
GO:0009168 purine ribonucleoside monophosphate biosynthetic process biological_process
GO:0005615 extracellular space cellular_component
GO:0019239 deaminase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792424.1 True 1373 mRNA 0.52 8 8927072 8932977

Neighbor

gene id symbol gene type direction distance location
atp6v1e1b LOC100708725,LOC104926722,LOC103358108,LOC106937970,LOC103156918,LOC106914460 coding upstream 276 8918234 ~ 8926796 (+)
gnptab gnptab coding upstream 82047 8818570 ~ 8845025 (+)
washc3 ccdc53 coding upstream 119902 8802548 ~ 8807170 (+)
acss3 acss3 coding upstream 361717 8515588 ~ 8565355 (+)
myf5 myf5 coding upstream 456038 8468661 ~ 8471034 (+)
LOC120553653 fgf6,LOC100708453,LOC101478942,LOC103358103 coding downstream 73581 9006558 ~ 9010187 (+)
fgf23 fgf23 coding downstream 84109 9017086 ~ 9020129 (+)
llph llph coding downstream 154196 9087173 ~ 9089548 (+)
guca1a LOC103358093,LOC102788764 coding downstream 183828 9116805 ~ 9119985 (+)
LOC120553346 ergic2 coding downstream 335221 9268198 ~ 9273908 (+)
G226641 mybpc1 non-coding upstream 43395 8881817 ~ 8883677 (+)
G226638 NA non-coding upstream 56361 8870018 ~ 8870711 (+)
LOC120553277 NA non-coding upstream 306577 8617814 ~ 8620495 (+)
G226554 NA non-coding upstream 518413 8341630 ~ 8408659 (+)
G226720 NA non-coding downstream 2073 8935050 ~ 8935551 (+)
LOC120553611 NA non-coding downstream 8864 8941841 ~ 8943537 (+)
G226716 NA non-coding downstream 79165 9012142 ~ 9012662 (+)
G226717 NA non-coding downstream 79866 9012843 ~ 9013646 (+)
G226747 NA non-coding downstream 82638 9015615 ~ 9015901 (+)
rps16 rps16,LOC103382554 other upstream 494375 8426635 ~ 8432697 (+)
LOC120553156 LOC104945813 other upstream 1357769 7566655 ~ 7569303 (+)
LOC120553154 LOC104945813,LOC103356648 other upstream 1394995 7525892 ~ 7532077 (+)
ascl1a ascl1 other upstream 1500818 7423618 ~ 7426254 (+)
nrip2 LOC102781986,LOC100711207,LOC102191975 other upstream 1526673 7370442 ~ 7400399 (+)
lhfpl3 lhfpl3,LOC101483460 other downstream 201617 9134594 ~ 9173220 (+)
ndufb2 ndufb2,LOC102790702 other downstream 304249 9237226 ~ 9241349 (+)
G227121 kera other downstream 1764277 10697254 ~ 10699718 (+)
G227141 dcn,LOC103382665 other downstream 1799092 10732069 ~ 10737503 (+)
impdh1b LOC104968094,LOC103355171,LOC102293685,LOC102194436,LOC104918784 other downstream 2015308 10948285 ~ 10986201 (+)

Expression


Co-expression Network