LOC120553744 (LOC103369285)


Basic Information

Item Value
gene id LOC120553744
gene name LOC103369285
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 18862872 ~ 18889356 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792440.1
TGTGCAGTTCCTCCTGGTTTCACAGCGAGAGCATCAGGCAGCATGACCTCACAGCGATGGATGCTGGCATTCTGCTTTTCACTGGCCTCAGTTTTAAGCCCAGGGGAATCGGTGACAACATCAGAAGCTAAGAAATACACTTGCAGGACATTTGGCAGCGGGGTCGTCCAGCCTTTCAGCGGTTCAAGTTTCTATGTTCGCTCCAACTGCCCATTCACCCTAACCCGTTTCACCCACAACCGGGTGGAATGTGATATCACCACACGGCGTGGTGACAACGGGCTGCTGGTCCATGTTGAGATCATAATCAACAAAGTCAGGACTGTTGTGCAGAATGGGAGCATCCTGGTGGAGAAGAAAAGTGTTTCCCTTCCATACGACCACACCTACCAGCACATCTTTCACTACGGCATCTACACTAAACTGAAGAGCTTGCtgctccctctgtctgtcaccTGGCACAATGTACCGGGAGGAATAGACTCTTTGCGGGTGGAGCTAGAGCAGGAGCTGAGCACCGACATGACTGGACTGTGTGGAAACAACGTCCCAGGTGACAAGAAGCAGTTGATTAAGGAGAGCGTCCTTCCTGAGGACACATGTCAAACCCGAGATCCTGTGTCCACTCTGAATCCAGTATGCCAGCAGTTTGTTTCCAACACCTTCGAATGTCTGCAAGGCATGGCACCTCAATATAATACCCTCTGTGAAGAGAACATTTACGGCTATGAAATGAGCAAATACATCGGCTGTGCTTTCTTCAGTGAAGTTGTCCAACAGTGTGGAAACAACAGCTACATCTGGAATATATGGAGAAGTTTAACCAAATGTGCGGAACCAAGTTGTTCAGGAGACCTGGTTTATGTGGAACAGGGCGCGGCCTTTGTTCCCAGCTGCTCAAATCCAAACCCTGGATTCTCCAAACAAGAACTCACCAGCTCCTGTGTCTGCCCAGAGGGCAAGGTGCTTAATGATCACGCAGATGGCTTcagctgtgtgagtgtgtccagCTGCCCCTGTGTCTTTGCTGGTAGGAGATACTCACCCGGAGACGTGCGCACATCCAAGTGTCAGTCATGTATGTGTGACAGTGGGAAATGGAAATGCTCTGAAAACAACTGCCCCACCAGATGTCTCATTGAAGGGCAGTTTGTGAGAACATTTGATGGCAAACAATATGCCCTCCCCGGTAAATGTACATATGTGGCTTCACAGGGTCTCAACTGGACGATAACAATCAAATTTTCTGATAAGGCACCCTTTCTGGAAACAGTCACTCTTCTGCTTTCTCAGGTACAAGACATGTATATGTTTTCAGACAACATGGTTAAATTCGGAGAGGAGAAGATCACTGAACTTCATCAGTCTgATCACGCTCTGGTTTTCTGGCAGTCCTCCATGTATGTCCAGGTCCACACATCCTTTGGTATGAAGATCCAAGTCCAGATGTCTCCTGAAATCCAGCTGTACATTACCCCACCCAGAAACCACACAGAGGCGATCTCAGGTCTTTGTGGAAACGACAACAGTGACACCACAGACGACTTCACCACCAGCAGCAGGATCATCGAGAACTCGGCTCAACCTTTTGCTCAGTCCTGGAGTGTGGGTGACTGTCCGGTGAACATACCCACCACCTGCATCAACAAAGACAATGAAATATTTGCTGATGAAAAGTGCTCTGTGTTGAACAACCCAACTGGAGCATTTGCTCCATGCCATGGTTATATCCCAATTGATCACTACCACACGGCTTGCATCCAAAGAACATGTAACTGTGGCAGCAGTCTGACGCAGTGCTTGTGTGTTGCCCTGGGCAGCTATGCCAAAGCCTGTGCCAATCTGGGTGTTGTAATTGGTGACTGGAGGAGAGCCACCAACTGCACATTGAAATGTGAGAAGAACCAAGTATTCTCCTACAACATGCAAGCCTGCAACCACACATGCCGTTCCCTGTCTGGCCCTGACCCTCGCTGTGGGCTGGAAGACGCTCTTGTGGAGGGCTGTGGCTGTCCAGCGGGAACTCACCTGAACCAAGGAGACACCTGTTCCCCAAAGGCAGAGTGCAATTGTCACTACTGCTATGCCACAATGAACTGTGAGAGTGGCTGTTACTGCCCAAAACAGTACGAAGATCACCGTGGAAACTGTGTTTCTCTGCACAACTGCACCTGTGTGTACAGTGGCAAAGTATTCAGTGCAGGACAGCATGTCAAAACCAACTGTAAAACATGTGTCTGTGGTCAGGGTCAGTGGGACTGCAAAGACGAGCCATGTCCTGGGAAGTGTCAAGTTTACGGAAATGGACACTACCAGACCTTTGACTCCAAATGGTACCGCTATGATGGACAATGTCAGTACACACTTGTAGAGGATGACTGTGGAACTAGAAACGGCACCTTCTCTGTCAGAGTGGAGAGTGTCCCCTGCTGTGATGAGGCGCTTACCTGCTCTCGCTCTATCGTCCTCAACCTGCAGGGCAAGGTCACCCTGACACTGAGTGACATGAAGGTGACCAGACGCCATCATGAAGGCTGGACTCTGCAGGACCATTCACTTTACTCCACACACACTGTGGGACTCTACATCATAATCTCAGTGCCAAGCAGAGGGATAACTCTCATCTGGGACAAACACACCCGGATCACCATAGAGCTGCATGAAAACTGGAGGAACAGAGTGTGCGGCCTCTGTGGGAATTTTGACTTCAACGAGATGAATGACCTACAGATAAGTGGCTCAGCAGTGGTGTCCAGTCCCCTGGCATTTGGTAACAGCTGGAAAGCCGCCACACCCCCTTGCTCTGATGTGACCAAAGAGATATTTCCATGTGACCGCAACTCTTACTGCTTAGCCTGGGCCCAGCGGCGCTGTATGATCATTACAGGAGACACATTCAAAGATTGCCACTTAAAAGGGGAGCCACACCCCTACTACAACTCTTTGTGGGGGGCCCCTTAAGAGACCTGTGAGTTTGAAGGAAAGTTTCTGGGCTTCTGCACAGCTGTGGCAGCCTACGCAGAGGCCTGCAGCGACcacaatgtgtgtgtaaaatggaGGACACCTGATTTGTGCCCCGTCTACTGTGACTTCTACAACGAGCAAGGCCAGTGTAGCTGGCACTATGAAGCATGTGGTGAGATGCTAACCTGTGGCAAAGACAACTACATCAATCACAAGTTGGAAGGTTGCTACCCCAGATGTTCAAAAGAAGTGCCATACTATGATGAAAATACTGGTGAATGCACTAAATTGAGGAACTGCACCTGTTATTTTAATGACACTGTCATTCAGCCTGGGGCAGCGGTGATGATACACTCTATAAAGTGCCGCTGTGAAAATGGATCAATAAAATGTCAACCTACCACCACTCCCACCACTACACCTACCACCACTACACCTACCACCACTACATCTACCGACACTACACCTACCACCACTACACCTACCACCACTACATCTACCGACACTACACCTACCACCACTACATCTACCGACACTACATCTACCACCACTCCCACCATTACACCTAGCACCACTACACCTACCACCACTTCCACCACTACTACACCTACCACCACTCCCACCACTACACCTACCACCACTACAGCTACCACCACTACACCTTACATCACTACACCTACCACCACTACCACCACTACACCTTACACCACTACACCTACCACCACTACACCTAGCACCACTACACCTACCACCACTACACCTTACACCACTACACCTACCACCACTACAACTACCACCACTACCACTACTACACCTACCACCACTCCCACCACTACAACTACCGACACTACACCTACCACCACTACACCTAGCACCACTACACCTACCACACACTACCCTAACTAACAACCTACCACCACTACCACTACTACACCTTCCACCCCACCTACCACCACTACACCTACCACCACTACACCTTCCACCACTACACCTACCACCACTACACCTTACACCACTACACCTACCGCCACTACACCTTCCACCACTACACCTACCACCACTACACCTTACACCACTACACCTACCACCACTTCCACCACTACTACACCTACCACCACTCCCACCACTACACCTACCACCACTACACCTTACACCACTACACCTACCACCACTACACCTAGCACCACTACACCTACCACCACTACACCTTACACCACTACCACCACTACACCTACCACCACTACCACTACTACACCTTCCACCACTCCCATCACTACACCTACCACCACTACACCTTACACCACTACACCTACCACCACTACACCTTACACCACTACACCTACCACCACTACCACCACTACACCTTACACCACTACACCCACCACCACTACCACTACTACACCTACCACCACTCCCACCACTACACCTACCACCACTACACctaacaccaccaccactaccactACTACACCTACCACCACTCCCACCACTACACCTACCACCACTACACCTTACACCACTACACCTACCACCACTACCACTACTACACCTACCACCACTCCCACCACTACACCTACCACCACTACACCTTACACCACTACACCTACCACCACTACACCTACCACCACTACACCTTACACCACTACACCTACCACCACTACAACTACCACACTACACCTACCACCACTACACCTACACCACTACACCTACCACCACTCCCACCACTACACCTACCATCACTCCCACCACTACACCTACCATCACTACCACCACTACACCTTCCACCACTACACCTACCACCACTACACCTACCACCACTACACCTACCACCACTACACCTACCACCACTACACCTACACCACTACACCTACCACCACTACCACCACTACACCTTACACCACTACACCTACCACCACTACACCTACCACCACTACCACTACTACACCTACCACCACTCCCACCACTACACCTACCACCACTACACCTACCACCACTACACCTTACACCACTACACCTAGCACCACTACACCTACCACCACTACATCTTACACCACTACACCTACCACCACTACCACCACTACACCTTACACCACTACACCTACCACCACTACCACCACTACACCTTACACCACTACACCTACCACCACTACCACTACTACACCTACCACCACTCCCACCACTACACCTACCACCACTACACCTTACACCACTACACCTACCACCACTACACCTACCACCCCTACAACTACCACCACTACACCTTACACCACTACACCTACCACCACTACACCTACCACCACTATACCTTACACCACTACACCTACCACCACTACACCTTACACCACTACACCTACCACCACTACACCTACCACCACTACACTTACACCCATCACCAACCCTACTCCCACTACAAGCAACCCATCATCCTCTCcacaagtgtgtatgtgtgaagacCTCAAGAAGAAAAAACAGTGGAATTGTGGTGAGACATGGACAGAGGACTGCTTTCATAAAAAGTGTACAGATGGGAAGATAGAGTTGACTTCGGTGGTTTGTCCAAATTCTTCAATTCCAAACTGCCCCAGAGGCCAGCGCACAAGAGTCTCAGATGGATGCTGTGAAACATGGAAGTGTGACTGTCGCTGTGAGCTATATGGAGATCCCCACTACATCTCTTTCCAAGGTGTAACCTTTGATTTCCTGAACGATTGCACCTACATCCTGGTGGAGGAGCAGTCCCCACGTCATAATCTGACCATTGCTGTGGACAACTTCTACTGTGTGCAGGGCCTCCAAGGCTCCTGTGCTAAAGGCATCATCCTGAAATATCAGAACAACATAGCTACACTCAGTATCCTTCCCGATATGTTTAAAGTACAGGCCACTCTGAACAACGTAACCATTGAGCCGCCATATGAGGAGCATGGGTTGAAGTTTGAGACCACGAGGTACATAGTGTCAATCTACATCCCAGAGGTCCGCTCTTATGTCTCCCTCAGTCCGTTTTATACCCTGGTGGTCAGTCTGGCTATGGAGCACTTCCTCAACAACACCCAGGGACAATGTGGTGTATGTGGTGGTGGATCATGCATCCGTAAAGGAGGGCAGATCGAGAAAGACAGCTGCTGTGATAAGACGGCCTCTGACTGGGTGTATGCTGACCCGCTGAAGCCAGCCTGTGCTTCTGCACCAAGGGACATACCTTGTACCTATGTACCCCCTACCCCATCCCCTCCAACCCCCTGCACTGCGAGCAGACTATGCGATCTGCTAGACCACCCAGTCTTTTCAAAGTGCAGCAGGTACATGAATCTGACCGCTAAAAAGAAGAACTGTGAGTTTGATTCATGCAGAAATGGTCCTTGCTCTTCACTAGAACAAGCTGTTGATGAATGCAAGAAGGCTGGTTTCTGTATTGACTGGAGACGACTGACTGATGGAGGCTGTGATGTGACATGTCCAAAAGGATTGGCTTACAGAGAATGTCATAACAAGCTGGATGACTTCTGCGATGGAGGGAGAAAATATCCAGGAGCCTCCCTCGAGAAAAACGAGGCAGGCTGTTTTTGTCCTAGCGGCCTCTTCAGGGCAGGAAATCACTCTGAcatctgtgtgtctgactgtgccTATTGTAAAGGACCACTCGGTGAGCCCAAACTGCCTGGTGAGGTATGGCAGTCCGGCTGTAATATGTGTACATGCAACAACCAGACTCGCACAGAGAAGTGTGTTCCAAAACCTCCTGTGCCTGTTCCCTCCTGTAGCCCCAATGCTGTGCTGGTAAACACCTCTTGCTGTGGTGATCAGATTTGTGTTGAGAAGACGTGCAGTTATCATGGAAAAACATACAAGgTTGGAGACAGATGGACGGATGCTGCCCATCCCTGCATGTCATATAACTGCAGCATAGAGGGTATTCAGACTGAGACTAGAGTCTGTCCCACAGTAGAGTGTCAGGAGGAGGACAGAATTTGGGATGATCAACACTGCTGCTTTACATGTAACCAGAGGTGTGCTCCGAAGGTGACCAGTATCAGTGTTACCGTAGACAACTGTACCACCGTCATGCAGATACCTGTGTGTCAGGGCCAATGTGTGTCTCAGCCCAGTGTCGTGTTGTTACACAGTGAGCTGCAGGTGGAGCAGAAGTGCGTATGCTGTCAGGAGTCGAGCTCAGAGAAGAGACCAGCGACTCTGCAGTGCTCTGACCGCACGATCAGACCCTACACCTACAAGCACATCACCAGCTGTGAGTGCCGAGCCTGCAGCATACTGGGCTGAAAAGTACTgccagctcagactggaggtATCCTTTAGATTTCCAAATCAAAATCTAATGTATTCAAATTTAATGGATTACTAATCGAAAATCCCTCCAATTGAACAtgcttttttctgtatttaaagCAATTACTACATCTGTTTCCAATCAAATAAACCAAATATGCATACAA

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: mucin-19-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792440.1 True 7418 mRNA 0.50 44 18862872 18889356

Neighbor

gene id symbol gene type direction distance location
LOC120553631 NA coding upstream 124502 18731704 ~ 18738370 (+)
alg10 alg10,LOC108244056 coding upstream 323445 18535729 ~ 18539427 (+)
cerk cerk,LOC103356477 coding upstream 549166 18274421 ~ 18313706 (+)
brd1a brd1,LOC101475857 coding upstream 1261151 17584577 ~ 17601721 (+)
trnak-cuu_15 NA coding upstream 1272709 17590091 ~ 17590163 (+)
LOC120553745 NA coding downstream 11259 18900615 ~ 18901342 (+)
LOC120553380 NA coding downstream 12194 18901550 ~ 18911762 (+)
LOC120553378 LOC103374463,LOC104964816 coding downstream 25609 18914965 ~ 18927966 (+)
LOC120553377 LOC105936313,LOC107099288,LOC103155794 coding downstream 40914 18930270 ~ 18941975 (+)
LOC120553379 iapp,LOC103371156 coding downstream 56802 18946158 ~ 18948515 (+)
G228622 NA non-coding upstream 123388 18738484 ~ 18739484 (+)
G228611 LOC102192848,LOC101469293 non-coding upstream 185307 18676351 ~ 18677565 (+)
G228605 NA non-coding upstream 198900 18604993 ~ 18663972 (+)
G228593 NA non-coding upstream 328523 18533301 ~ 18534349 (+)
LOC120553397 NA non-coding upstream 377234 18482088 ~ 18485638 (+)
LOC120553383 NA non-coding downstream 2818 18892174 ~ 18897527 (+)
LOC120553381 NA non-coding downstream 15880 18905236 ~ 18908881 (+)
G228787 NA non-coding downstream 531016 19420372 ~ 19420829 (+)
LOC120553618 NA non-coding downstream 634719 19524075 ~ 19559043 (+)
LOC120553213 NA non-coding downstream 826906 19716262 ~ 19717346 (+)
LOC120553630 muc19 other upstream 7558 18822832 ~ 18855314 (+)
srr srr,LOC105936311,LOC103459528 other upstream 329758 18530136 ~ 18533114 (+)
G228335 ahcyl2,LOC103371314,LOC107725924,LOC107656398 other upstream 1940049 16919663 ~ 16922823 (+)
morn2 morn2 other upstream 1945944 16880276 ~ 16916928 (+)
stmp1 NA other upstream 1995076 16866310 ~ 16867796 (+)
LOC120553164 NA other downstream 463627 19352983 ~ 19355551 (+)
G228784 LOC103359233,LOC104943309,LOC100709697 other downstream 521134 19410490 ~ 19413704 (+)
LOC120553210 LOC104943308 other downstream 742581 19631937 ~ 19839382 (+)
LOC120553104 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC103459764,LOC106945279 other downstream 963572 19852928 ~ 19905952 (+)
G228924 NA other downstream 1092892 19982248 ~ 19985648 (+)

Expression


Co-expression Network