LOC120553751


Basic Information

Item Value
gene id LOC120553751
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 20185082 ~ 20190908 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792448.1
ACCTTGTACATACCATAACAGAGTCAGACGCGCGCTGCGCTTTTACGCACGACACCAGCGACCCCGTGGAGGAGAGCGGAGTGCCATGAAGACCGTCTATGTGTGAGCATTTTGCTGTCATCACTACAAGAAGATGATCGTGCTGCCGGCTCTGTTGTTCATTCTCTGGGGAGAAGAGGCTCGGTGCCTGGAGGAGAATGGAGGCTTCACTTTTGATGGAGACCTCCGCCACTTCGCTGTGGCCACCAACACGGTTTACATCGCTACAGCGGAGACTCTGTACCAGCTGAGCCACGACCTGACTCTGGTCCAGAGTCTGACTCAGAGAGGAATCCTGAAGGGCGGGTGTCAGATGGATGCGCAGTTTTCCCGGGTTTCTGAGACGGATGAGCGGAACGCGACTTTCAGCGTCAACATGTTATTGCCTTTTGTTGAGACTGAAACTCTGATCAGCTGCGGTGTGATCGAGTGCGGTTACTGCGAGGTGCTGGACCTGaagaacatttcaaatgtgcagTATATGGAGAACATCCAGGTTGGATCCCCAAGGCGGAGCAGCGCATCCATCGGCTTCCTGGTGAATGTGGAGGAGACAACTACCGAGACTTACATTCTGACTGCCATACAGCAATACGAAGTCAAATCCACAAAGAGCAGCTGCTCCACGGAATCAGAAGCGGTACAACTTCGTAATACGAATCACAAGCAATACGGAACTATATTTTCCGAAATTAGCGAGTTCTCTATCGATGTGATCAAACGTTGTCCTCCAGGCAATGCGGAGTTTGTGGATGGATTTCAGATCAGTTTAACCATTTATCTTTTCTCTAACCTGCCCTCAAGTGACACAAGCAACAGAGTCCGTCTCATTTGGCTCGAGGGCAAAACAGACAAAGCGCAGACTCTCAGGTCGCTGCGGGGAGCGACCCTCAGCATCTCTGATGGGGGGAGAGGCAGCAGACTCCTCGCCTCCTCCGTGATCCCGGGCGGGCCGCCGGTGCTCTGGAGCGGCGTGTTCAGTGTGGACGGAGGACCCACCGACACAGAGCTGCTACTGTTTGACATCAGCCCTCCTCTCACCGGAGACACTGATGAAGATCCAGACTTCTGCAGTGTCTGCAGCACTGACAGGATAAGACTGCCGCCAAAGACTCTGAAGCCCAAGGCGGTGCTCTTCAGGCAGAAGTCCATGACCTCTGTGCTGGCAGTGAGACACAAGGCCTGGATGGTTTTCTTCATTGGGACAGGAGATGGGCAGCTCATTAAGCTTGCTGTGGACAAGAACTATCACACCACCTGTCCCAGGATGAAGCGTGTACCTGCCGTCAAGTGCAGCACATCCACAAATGTGCAGGACTGTTGGTCTGCACAGGATCCGTACTGCGTCTGGTGCGGCACTAAAAAAGGTCAGGAACAACATCTGCAGATCACACTTAACATCCAGACACATCTGAGTGTGGGTCAGAAGGCTGTCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792448.1 True 1477 mRNA 0.53 6 20185082 20190908

Neighbor

gene id symbol gene type direction distance location
LOC120553750 NA coding upstream 719 20174451 ~ 20184363 (+)
LOC120553415 NA coding upstream 23043 20124641 ~ 20162039 (+)
LOC120553417 syn3 coding upstream 137086 19923771 ~ 20047996 (+)
LOC120553510 slc16a7,LOC103364250 coding upstream 557369 19594413 ~ 19627713 (+)
atp23 atp23,LOC102777000,LOC106609469 coding upstream 677491 19504380 ~ 19507591 (+)
plxnc1 NA coding downstream 21879 20212787 ~ 20260428 (+)
elk3 LOC104930592,LOC102779228,LOC102209493,LOC102296588 coding downstream 96356 20287264 ~ 20298086 (+)
LOC120553583 phyh coding downstream 164708 20355616 ~ 20362520 (+)
LOC120553582 phyh coding downstream 173895 20364803 ~ 20376348 (+)
ccdc3a ccdc3,LOC102778083 coding downstream 231929 20422837 ~ 20434548 (+)
LOC120553527 NA non-coding upstream 263228 19921100 ~ 19921854 (+)
G228922 NA non-coding upstream 268765 19916115 ~ 19916317 (+)
G228912 NA non-coding upstream 313359 19869393 ~ 19871723 (+)
LOC120553215 NA non-coding upstream 343420 19834007 ~ 19841662 (+)
G228905 NA non-coding upstream 374502 19809675 ~ 19810580 (+)
G228989 NA non-coding downstream 107826 20298734 ~ 20301441 (+)
G229058 NA non-coding downstream 248550 20439458 ~ 20448557 (+)
G229060 NA non-coding downstream 251759 20442667 ~ 20454788 (+)
G229108 cdc123,LOC102776001 non-coding downstream 372155 20563063 ~ 20565180 (+)
G229130 NA non-coding downstream 416324 20607232 ~ 20607530 (+)
LOC120553749 NA other upstream 11675 20147078 ~ 20173407 (+)
G228924 NA other upstream 199434 19982248 ~ 19985648 (+)
LOC120553104 LOC103364246,LOC103152567,LOC106913527,LOC103459763,LOC103459764,LOC106945279 other upstream 279130 19852928 ~ 19905952 (+)
LOC120553210 LOC104943308 other upstream 345700 19631937 ~ 19839382 (+)
G228784 LOC103359233,LOC104943309,LOC100709697 other upstream 771378 19410490 ~ 19413704 (+)
LOC120553418 NA other downstream 20 20190928 ~ 20225185 (+)
ucmaa NA other downstream 191485 20382393 ~ 20391406 (+)
LOC120553023 LOC106946322,LOC103151516,LOC104922640 other downstream 957359 21148267 ~ 21150351 (+)
arid2 arid2 other downstream 1185964 21376872 ~ 21429238 (+)
G229423 NA other downstream 1647014 21837922 ~ 21847020 (+)

Expression


Co-expression Network