LOC120553766 (LOC107743936,LOC107602777)


Basic Information

Item Value
gene id LOC120553766
gene name LOC107743936,LOC107602777
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 28126586 ~ 28132212 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792461.1
ATGTTTTCTTACACTCCCTACCCAAATGATGCACAGCGGTGTGAAGTAGTAGAGGCTCTCATAAAACGGCATCCATGTTTGAAGGAGCCAGGCTCTTTCAATGGTCTGTATGGATGGCAACAGAGCCTGAAGTACAAAATAGGAAATTACCGAAGCAAACTTCGAACGCATGGGATTCCAGAACTATTGGTTAACTCTCTACAGCACAAATCTCCTGGAGACAAGAAACCAGCCAAGAACGTAAAAAAACCAAGAAAATCCGAGGTGAACTACCTTCCCCCTCTTCCTGCAGGGGAAACAGAAGATTCCCTTGAGAGTGTCAGGCAGGAACTGATATCTGAGGCTAAGAAAAAGAATAATGGCAGAGTTATAAATGAGATGATGTCCAGAACCTTTAGTTTCCGAAGACAGGAGATTGTAGGCAAAGCCCCGGGTGTTGCAGATCTGCTAGAGAGATGGCCTGCCCTCTTTGAACCATCCCAGATCAATGAAGAGTTTCGGAGAATCAATGGCATATCACTTGAGCCGACATTCATGTCACAGTTGGACAAACGCACTCCAAAGATGTTGTCACTTTTCAATTCAAAGGGCGGAGCTGTCGGTCAAAGAATCAAGTCCCAGATGTTGGAACTCATCCAGGATCCATCTGCCTCTGAGGAGAAAAGACGAGAGGTGATTCTGAGATGTCTGACTGAGTACATGGGGGAGAGCCAAGAACAACTGATCAGTGAACACCACAGTTGTGATGAAACCGAGGTGTCCGCTGAACTCAGCGATTGCATAATGAAAGTTTACATGTGCCATCAGCCCAATGCCATTGGCATTGTCATCGAAGGACATCCAGTGGTCAGAGGTCTTAACAACTTGTCACAAGCATGCTGCCTACTGCTTGGACTTACTTATTGCCTGGATATGAAATATCCACCAAAACTGCAGCACACATTTGAGACGTACCAAAGGCTCTTTGTTGGAATAGACCCCATGCGCCCTAAACCATCATCTAAATACACAAGTCTCCTCAACAAGTTGTCTTAGATGACTTCTTGTCACTTATCTCACCTTGGTAGGTGAGACTACACATACTTCAGCATAATAGCATAATGTGAAATGTTCAGGGTGGTATATTTTCTGAAGTTAATATAATCATGCTTAGTTCAACTTGTTCTGTTTCATACTATTTAGTTGATACtattgacatttaaaaagaattCTCTTCACCAAAACTCAATGGCCTTTTCAGTCATATCATTGTTGTGCCTTGAAACTAAATTGACAGGTAACTGTTCAGTTTGTCATGCTACGTGATGAAGTCTTTTGGCAAGTTTTTCAGGTAATAGAATTTCATTGCATTTGTGTTCATTCTAATGTGCCTTAAATGAAAACTGACTTAACTGTTTACTAGTCAATCCCTCATGAGGTAGATACACCTACTGTGTAATTCAGCAGTtctttaaacaattttaaatatTGTTATTGCAATTTTA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107743936

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792461.1 True 1484 mRNA 0.42 4 28126586 28132212

Neighbor

gene id symbol gene type direction distance location
LOC120552998 NA coding downstream 89551 28033497 ~ 28037035 (-)
LOC120553236 strap coding downstream 264500 27848579 ~ 27862086 (-)
tmpoa tmpo coding downstream 278423 27798509 ~ 27848163 (-)
slc25a3a slc25a3 coding downstream 347403 27762883 ~ 27779183 (-)
LOC120553769 NA coding upstream 432687 28564899 ~ 28566747 (-)
LOC120553775 NA coding upstream 435773 28567985 ~ 28577657 (-)
LOC120553219 NA coding upstream 610310 28742522 ~ 28743502 (-)
LOC120553817 NA coding upstream 680233 28812445 ~ 28812635 (-)
LOC120553832 NA coding upstream 681721 28813933 ~ 28814120 (-)
G230988 NA non-coding downstream 22647 28103567 ~ 28103939 (-)
G230986 NA non-coding downstream 37697 28088428 ~ 28088889 (-)
G230984 NA non-coding downstream 38402 28087672 ~ 28088184 (-)
G230977 NA non-coding downstream 61757 28064550 ~ 28064829 (-)
G230965 NA non-coding downstream 102095 28024012 ~ 28024491 (-)
G231012 NA non-coding upstream 161681 28293893 ~ 28294569 (-)
G231042 NA non-coding upstream 207908 28340120 ~ 28341022 (-)
G231047 NA non-coding upstream 249109 28381321 ~ 28381567 (-)
G231048 NA non-coding upstream 256326 28388538 ~ 28388885 (-)
LOC120553141 NA non-coding upstream 434817 28567029 ~ 28567200 (-)
ipo8 ipo8 other downstream 575874 27502100 ~ 27550712 (-)
G230730 NA other downstream 1007989 27117206 ~ 27118597 (-)
G230594 mrps33 other downstream 1745221 26375692 ~ 26381365 (-)
mkrn1 mkrn1 other downstream 1930076 26171320 ~ 26196510 (-)
LOC120553115 NA other downstream 2525206 25595578 ~ 25601380 (-)
LOC120553767 LOC104927640,LOC103363517 other upstream 208870 28341082 ~ 28430526 (-)
G231126 NA other upstream 612391 28744603 ~ 28745246 (-)
G231136 NA other upstream 659793 28792005 ~ 28792745 (-)
G231143 NA other upstream 702054 28834266 ~ 28837740 (-)

Expression


Co-expression Network