ckap4


Basic Information

Item Value
gene id ckap4
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 10242672 ~ 10247265 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792478.1
AGGCTGTAAGCATTAATGAACAGCCTGGAGTTAAACATGGGACAGCCCCCATCCGCATacctcaacaacaaaaaaaaagcccccGTGGAAAGACACGACGCGCTCGCTGATACGCTGCTGGTCCAGTTAGTGGGCCTGGACTGGAAACATACTCCATCCATCCACGACTGCAAAACCAGCAGCtctcacatcacacacaaacacatttatctCAGTGAGCTCCCATTCACGATGACTGCGAAAAACCGACACAAGAACAGCTCGAGCGAGAAGAGCGCCGCATCCAGCCAAGATGATGCGTCGAAGAAAAGCCAAAAGAGCACCAGTAACGGGCTGAGTGGCCCCGGACCTCAGGGGCCACGATCAGGCAGCTGCCTCGGCTTTGTTGCGACCGCAGTGTTTTATATCGCGTTAATAGGCGCTGCAGGGTTTGCTGCTTTTTATTTACAACAAGTTGTGGAGGAAATGCGACAGACAAACGCCAGGCACGAGGAGAGCGCACGGCAAAACGCGGAGTTGAGCGGAAAAATGGAGAGCGTCGTTCAACAGGTGGAGTCTCTGAGTAGTGTTGTGGACGGGCTGGAGTCATCCCTGGGGGTTACACGGGTGGAGATGGAGGGGGCCATCAGCCGGATGAAGAGGGGCGAGGTGGAGACGAGGAGGGTGGAGGAGGCCCTTCAGAGGCTCCAGAATGATCTACTTAGGGACCTCTCAGAGGGCATCAACGAGGTGAAGGAGGCCCGAGAGAGGGACTTCTCTTCTCTGGAGACGACTGTGGAGGAGCGTCTGGCTGAGGTGAGTCAGTCCATCACAGCCAGCGTGGCCGAGTTCACCGGAGCTCAGGGCGAAACGCAGAGCCAGCTGGCTGATCTCAAGGCCCGCCTGGGGGACATGGAAGACCCTGCGCTCATCAAACAGGAGCTCTCCGCCATTGTGGATGCTGTAGCTGAAATCAAAACAGCCAAAGAGGAAGCTGATGCCTCAGCTGATTCGTTCAGGGAACAGGTAGGTGCTGTGAGGTCAGAGCTCCACAcccgcaaccaggaagtagccTCACTGTCCCAGGAAGTTGAAACAGTGAGGTTAGTCTTGCAAGAGACCATTGGAAATCTGAGGCAGTCCCTGTCTGCAGCAGAGGCTGATGTCAAGGCTCTGAAGGACAAAAGCATGACACTGGAGAGCGGCGTGGAGCAGGCCGCTGACACCGCTGGCCGCGCGGAGAAGGAGGTCAACGCAGCGGTCGCTCAGTTCCAGAAAAGATCAGACGACCTGGAAGCCCGAGTTAAAACATCGGAAGAGAGCGGAGATTCGCTGTCAGCATCGGTGTCAGACATCACCTCCAAAATGGAATCGCTATTCGCCAAATACGACAGCCATGAAAGCACTCTGGCCGCACAGGGGCAGGCTGTGGAGAAAGTCAAAACTGGCGTGGAGCAGGAGATGGAGGCACTGAAAAGCAGTTTTGGGGAGCTCCagtccaacatggctgctctggGCGGTGCCCAGACCAAGCTCCTGTCCAAGGACTCCAGCCTGGGTCAGCAGGTGGTGGACTTGGAGAATAGGCTCGCTGCTCTGGAGGACAGCAGCCGCAGCAGCATAAAGCCAGAGCAGCTCCAGAGCTTAAGAAGCATGGTAGATGGCTTGGAAAGCAAAGCAGCCAAGCTAGAAGGCCACGATCAGGCCATTTCTGCTCTTCAGAAAGCTCTGCAGGAGACTACACAGACACTGGCGGGTTTATCTATTGACAAGGAGGAAAAGTAGGGGGTTAGAGTTAGCAACGTCACATCAGGATACCCAAACACGGACAATAATGATTCCCAAAGGGTGACCTAAACCCACTTACTGTTTTCCGTGAAGCgatgtttcttcaaattcgTCGGTTGATGTCACGATGTTGAACATTTTAGTAGAAAAGTATAGCCAATGTGAGGAGTTAGGTCAGGAGGGCGAGGCAGAGCTGTACTGCTGATCTGTGAATTCAAATCcacattcattctgcactgtaGTTATTTTTCGTTcctaatgttttgtttaattgtCTGTGCCAAGGCggtttctttttaaaaaccaaGCTAATTCAATAATAAGCTCTGTTGGAGCACTTCTTTGTTTACTCACGTGTTTTTTACAAGAATAAAAACTCTTGTTGACCTAAA

Function

GO: NA

KEGG:

id description
K13999 CKAP4, CLIMP63; cytoskeleton-associated protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792478.1 True 2159 mRNA 0.53 3 10242672 10247265

Neighbor

gene id symbol gene type direction distance location
trnay-gua_61 NA coding downstream 46239 10196347 ~ 10196433 (-)
trnay-gua_60 NA coding downstream 46802 10195784 ~ 10195870 (-)
bik NA coding downstream 55699 10183285 ~ 10186973 (-)
si:ch73-352p4.8 LOC105937590,LOC104962836,LOC107085821,LOC102237094,LOC103140239,LOC107386545,LOC103459124 coding downstream 89518 10147639 ~ 10153154 (-)
rhno1 NA coding downstream 101966 10138942 ~ 10140706 (-)
LOC120553502 NA coding upstream 16720 10263985 ~ 10264705 (-)
apaf1 apaf1 coding upstream 317165 10564430 ~ 10623168 (-)
tcp11l2 tcp11l2,LOC102777109 coding upstream 376755 10624020 ~ 10632377 (-)
LOC120553733 NA coding upstream 387483 10634748 ~ 10635920 (-)
si:ch211-244b2.3 NA coding upstream 413655 10660920 ~ 10665486 (-)
G227021 pacsin2,LOC102778832 non-coding downstream 16775 10223494 ~ 10225897 (-)
G227019 NA non-coding downstream 22222 10218086 ~ 10220450 (-)
G226917 NA non-coding downstream 500112 9742004 ~ 9742560 (-)
G226803 LOC103358093,LOC102788764 non-coding downstream 1122701 9116810 ~ 9119971 (-)
G226800 NA non-coding downstream 1202815 9037771 ~ 9039857 (-)
LOC120553506 NA non-coding upstream 262466 10509731 ~ 10537837 (-)
G227089 NA non-coding upstream 290939 10538204 ~ 10538416 (-)
G227127 NA non-coding upstream 355329 10602594 ~ 10658927 (-)
LOC120553135 NA non-coding upstream 392482 10639747 ~ 10660499 (-)
LOC120553801 NA non-coding upstream 693113 10940378 ~ 10942825 (-)
dram1 dram1 other downstream 1428232 8809393 ~ 8814440 (-)
ppfia2 ppfia2 other downstream 1448762 8565242 ~ 8793910 (-)
G226495 LOC103356655,LOC105934024 other downstream 2351361 7888571 ~ 7891311 (-)
LOC120553151 LOC107386793,LOC104950937 other downstream 2748365 7422165 ~ 7494307 (-)
usp44 usp44,LOC102783730 other downstream 2964348 7269037 ~ 7278324 (-)
G227082 anks1b other upstream 266229 10513494 ~ 10522962 (-)
G227197 LOC102293685,LOC104918784,LOC102194436 other upstream 732933 10980198 ~ 10981259 (-)
hgfa LOC103365344,LOC104958230 other upstream 1211316 11458581 ~ 11482578 (-)
pcloa pclo,LOC107085986,LOC103358500,LOC102794373,LOC108235068,LOC106514760 other upstream 1370090 11617355 ~ 11676832 (-)
cracr2ab LOC102301749,LOC103365394 other upstream 1589983 11837248 ~ 11848941 (-)

Expression


Co-expression Network