XLOC_005035



Basic Information


Item Value
gene id XLOC_005035
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 180200 ~ 180809 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00011049
TGCAGAACTGTCTGTCTAACAATGTGAGCTTATAAGTGAATAATGATGATGGAGGCAGGAGTTCTGGTCGGATTGTGGCTGTATTCCCATGGCAGCACCAGGAGAACACGGTATTACACGATCTGAAAAGCTGACTCAAAGCACACAACAGCACGTCACACGAGTCTAGATGTTCTTACAGCTAATTGTACAAACAGACTGTCCAAGAGCCGCACTTCACTGCCAGCACTCAGGGCGGCTTCATACAGCGGCTGGAGAATGTGTGGCCTGAGGAGACACACACTGGAGATCAGTGATGGGGAGAGGAGTATAGCGGAGTGCGGCAACATGCAGTAATGTGAACACATGTGGAGTAACGGGAAGCAGAGTGAAGGGCAGGATTATCAAGAGCAGTGAACTACAGTAATGTGAACTGAAGAGGAGAGAAGTAAAGCAGAGTAAACTACAGTAATGTGAACTGAAGAGGAGTGGAGTAAAGCTGAGTAAACTACAGTAATGTGAACTGAAGAGGAGTGGAGTAAAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00011049 True 523 lncRNA 0.47 2 180200 180809

Neighbor


gene id symbol gene type direction distance location
XLOC_005034 NA coding downstream 4681 171286 ~ 175519 (-)
XLOC_005033 dnah9 coding downstream 35124 137149 ~ 145076 (-)
XLOC_005032 FO818699.1 coding downstream 55936 118704 ~ 124264 (-)
XLOC_005031 NA coding downstream 114440 64267 ~ 65760 (-)
XLOC_005030 si:ch1073-357b18.4 coding downstream 125825 52468 ~ 54375 (-)
XLOC_005036 CABZ01102039.1 coding upstream 23286 204095 ~ 212843 (-)
XLOC_005037 NA coding upstream 69272 250081 ~ 279335 (-)
XLOC_005038 NA coding upstream 81587 262396 ~ 265201 (-)
XLOC_005039 map2k4b coding upstream 100357 281166 ~ 287633 (-)
XLOC_005040 adprm coding upstream 107299 288108 ~ 290815 (-)
XLOC_005042 NA non-coding upstream 156999 337808 ~ 355555 (-)
XLOC_005043 NA non-coding upstream 225378 406187 ~ 408631 (-)
XLOC_005057 NA non-coding upstream 891676 1072485 ~ 1085227 (-)

Expression



Co-expression Network