mest (mest)


Basic Information

Item Value
gene id mest
gene name mest
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 12308833 ~ 12316118 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792486.1
CCAGAGACTGCATAGGTGAAACCCATATAACTAAACGTTTGGGGAACCCGGAAGTATCAACAGAGTGAGACGTCTGCGCTTTTTCTCCTTACTACAAACCGTCGTTCCTTTCCGCTCTGCAGGAATTCCTTCTGCAGTATGGACTCTAAACACAGGAAGAAGGtctgctactactactaacgaccatagacagtatatagaagaTAACGACAGATCGCAACATTTCTAGGCAGGAATGAGACTCCCCTACCGCTGAGCTCAAGATGAGAGAGTGGTGGGTTCATGTGGGTTTGATCTGCATCCCGCTGGTGGCCGTCTACCTGCACATCCCGCCCCCTCAGCTGTCCCCTGCCCTGCAAAAGTGGCATAGTGCCGGGGAGGTGTTCCATTTCAGAGGCAGGGAGATCTTCTACAGAGATTCCTATGGGGCTTTGGGAAGCTCCGATGTCGTCATTCTGCTCCATGGCTTCCCCACCTCCAGCTTCGACTGGAACAAGATCTGGGAGCCACTCACTCAGCGCTTCCATCGAGTCATTGCACTGGACTTCCTGGGCTTTGGTTTCAGCGACAAGCCACGACCCCACAGGTACTCCATCTTCGAGCAGGCCAGTGTGGTGGAGGCCCTGGTGGCTCACTTGGGTCTGAGCAACCAGCGAGTGAATCTGGTGTCCCATGACTATGGAGACACTGTGGCCCTGGAGCTGCTCTTCAGGACTGACCAAAACCGCACAGGACACCTCATCATTAACAGCCTGTGTCTTTCTAATGGAGGATTATTCCCAGAAACACATTACCCACGTTTGCTGCAGAAGCTTCTGAAGGACTCTAGTTTTCTGGCTCCAGTTCTGACCCGTCTCACCAACTATATGATCTTCCAAAAAGGGATTGGAGACGTGTTCGGCCCGTACACGCAGCCCACAGACGCTGAGTTCTGGGACATGTGGACGGGTTTACGCTACAACGACGGCAACTTAGTGatggacagTATTCTGCAGTACATCAACCAGAGATTAAAACACAGGGAGCGATGGGTGGGTGTGCTCACTTCCACCTTCGTCCCACTGCACATGATCTACGGACCCCTGGACCCAGTCAACCCTCATCCTCAATTCATCCGTCTTTACCAGCAGCTGGTCCAGAGGTCGACGGTCACCATTTTGGACGAACACATCAGTCACTATCCTCAGCTGGAAGATCCCACTGGCTTCCTCAACGCatatttcaattttattcacTCTTTCTGAAGGGATACCAAATGCAACACCCCGTGTTCATTAATTATTTTCAGACCCTTAACAAGCTGTTTGGTACGTTAGCAACACTTATTCAAGGTGATAAACAGCCACATGAGGTGCAAAGACTTCCCCTGATGAACGTAACCAGGAGTAATGAGATTTATACACGAGTGACGGGATAATTTACCAGCACCAAACCCTAAAGTGTCAATTACTACCCTGGAAGACATCTAATATGAGCTAGAAACATTATTTATTCTACTTAATGCACAGAATCACTAATCTGGTAGTTTATGGACCTTCTTTCAACATGAAAGTTAAAGTTATAGGTTGTGCAATTACTGACTTACTGATTACTGACATCGTTTTGAGTCCTGCAATCAGCTGCATTCTAAATGAATTTTGATGATTTTCTACATTTCTCTTGATGTCAATGAAAAACCTAACTGTCAACTTTTCGTCAAATAAAACTAGTTTTGTATAAAA

Function

symbol description
mest Predicted to enable catalytic activity. Predicted to be involved in regulation of lipid storage. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human MEST (mesoderm specific transcript).

NR:

description
PREDICTED: mesoderm-specific transcript homolog protein isoform X2

GO:

id name namespace
GO:0060119 inner ear receptor cell development biological_process
GO:0070588 calcium ion transmembrane transport biological_process
GO:0048840 otolith development biological_process
GO:0007605 sensory perception of sound biological_process
GO:0006200 obsolete ATP catabolic process biological_process
GO:0048919 posterior lateral line neuromast development biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005388 calcium transmembrane transporter activity, phosphorylative mechanism molecular_function
GO:0005524 ATP binding molecular_function
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792486.1 True 1721 mRNA 0.47 12 12308833 12316118

Neighbor

gene id symbol gene type direction distance location
atp2b1a atp2b1,LOC103370548 coding upstream 4458 12260069 ~ 12304375 (+)
slc6a1l LOC103365402,LOC105916091 coding upstream 327705 11966470 ~ 11981128 (+)
LOC120553241 NA coding upstream 351661 11941865 ~ 11957172 (+)
tmtc2a tmtc2 coding upstream 379367 11872547 ~ 11929466 (+)
mettl25 mettl25 coding upstream 444134 11852680 ~ 11864699 (+)
chchd3a LOC103366397 coding downstream 245232 12561350 ~ 12634881 (+)
klhdc10 klhdc10,LOC102781502 coding downstream 761039 13077157 ~ 13082244 (+)
LOC120553267 LOC103372592,LOC104942102 coding downstream 805394 13121512 ~ 13125815 (+)
dcp1b LOC106595781 coding downstream 1022941 13339059 ~ 13353840 (+)
cacna2d4a cacna2d4,LOC102201998 coding downstream 1042769 13358887 ~ 13443536 (+)
G227363 NA non-coding upstream 65078 12243534 ~ 12243755 (+)
G227338 iqsec3 non-coding upstream 315881 11990100 ~ 11992952 (+)
G227267 NA non-coding upstream 680890 11624235 ~ 11627943 (+)
G227251 NA non-coding upstream 848333 11460113 ~ 11460500 (+)
G227221 NA non-coding upstream 1121051 11186939 ~ 11187782 (+)
G227499 NA non-coding downstream 671595 12987713 ~ 13043018 (+)
G227510 zc3hc1 non-coding downstream 755427 13071545 ~ 13075348 (+)
G227639 NA non-coding downstream 1177283 13493401 ~ 13493861 (+)
G227646 NA non-coding downstream 1200364 13516482 ~ 13531547 (+)
G227662 NA non-coding downstream 1238132 13554250 ~ 13554826 (+)
st8sia1 st8sia1 other upstream 182288 12106952 ~ 12126545 (+)
G227278 LOC104928793 other upstream 551516 11689169 ~ 11757317 (+)
G227216 NA other upstream 1195928 11102836 ~ 11112905 (+)
impdh1b LOC104968094,LOC103355171,LOC102293685,LOC102194436,LOC104918784 other upstream 1322632 10948285 ~ 10986201 (+)
G227141 dcn,LOC103382665 other upstream 1571330 10732069 ~ 10737503 (+)
plxna4 plxna4 other downstream 343150 12659268 ~ 12910189 (+)
nrf1 nrf1,LOC103372774 other downstream 689221 13005339 ~ 13022947 (+)
yeats4 yeats4 other downstream 1158431 13474549 ~ 13479115 (+)
LOC120553473 LOC102193240,LOC101463811,LOC103146510,LOC103459282,LOC106521789,LOC108235098 other downstream 1358686 13674804 ~ 13798380 (+)
trnak-cuu_11 NA other downstream 1452937 13769055 ~ 13769127 (+)

Expression


Co-expression Network