LOC120553803 (LOC103357126)


Basic Information

Item Value
gene id LOC120553803
gene name LOC103357126
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 21937338 ~ 21945575 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039792518.1
ACTGAGAAGTACTTTTGTATAGCTACAATTTATTCCTACCGAACATATACTGGTTGTTACTTAaagctcttattgtgaaagtgTACTGCACGTGTTTCCGGTCTGTAAGAAGCTAACAAATGGCTTGCAAGCTTGTGTTTGGGGACTTTTAAAAAGTGATTCTACATTTTCTTAATCATGGAAACGACAGGCAGTTCCTATCAAGTGGAAAACACAGATATATTCCTGCCGTTGTCATCATTGAGGCTGCTGATACCTCCTCTGCGGCTGCTTTCTGCAGCGATGTGGCAAGTGGCTCAGCGGAGAGAGGCTCTCGATTATGAAAATCTCGACGAGTTTGTGACGCTGGTCACGGCTACAGTGCCGGAGCTGCTCAACCCAAAGCAAAGAGGCACGCTGCTTCTGCGACTGAGAGCCAAAATTATTCTTGAGTTGTGCAGAAATGAGGAAACGGCCAACGTTTTGTGCATACAGCCTCACCTAGAACGAATCCGCCCTCCGGGATACACAGGCAGTGGGGATGCAGAGGTAGATGCAGAGGAGGCCATTTTTGTGGAGCTCATCCAAACACTACTGAAAGACCCAGCGGAGAGGGAGCATTTTTACCAGGAGGTTTTTCCAACAGAGTATGGTCCCAGCTACGACACAGACATGCAGCTGCTCGTGTGGGAGTTTCTGTCTAAACTGGAGAAACTCCTGCCAGTACCAGACCTCAGTAAGACGGTGTCATGGCTGACCTCTGCCCCCTCTGTACTGAAGGACTGCCTGCAAGAGCTCACCAATCCTAACGACCTGAGGTCTCTCCTGCAGCACCACAAATGCCTCGAGCACCTTGGAACAGAAGGTACCACTTTGGAGATATCCACCCAGGTCTTTGCCTGCTCAGAGTGTCCGTTCTTCCACATGCAGGAGTCCTACCTGCTGCAGCACATTGAGCACAGTCACCCTGAGCAGTACGGCAAACTCCAGAGGTCTGCAGAGACTGCGGATATCCCCAAGAAGAAGGCCCAGCGTCCTGAGTTCCCCAAGCCTTTCCCCATCCACGACAGGCCTGACCCTCACATGTGCCAGGAGTGCGGCAAAACTTTCACGCGCGCCTCAGACGTGAcgcgtcaccaacggacacaCACAGGCGAGCGCCCGTACACTTGCGAGGAGTGTAAGAAGGGCTTCAAGAACTCTTGGGATCTGACTAGACATCAGCGCATTCACACAGGGGAACGGCCCTTCCTCTGCTCCCAGTGCGGCAAACGCTTCACACAGATGGGATTGCTCAAGCTGCATTTCGAACGAACGGCCTGCGGACAGACGTGCAACCCTCCCCTCGAGCTCACGACAGAGGTCATCGTAGCAGAGGAGGCATCGGAGAATGTGGACAGTCAGTACAAATGCCAGAAATGTGGTGAGAGCTTCGGTAGCATCCTGGAACGGCTGAAGCACAGGCAGAGGCACGTGGTCAGGCGTCAGTACAAATGCTCCCTGTGCGAGAAGATATACAGCCGAGCGTCGGACCTCAAGAGGCACCAGATGAAACACACCGGCGAGCGGCCGTTTGCCTGCGAGTGTGGGAAAAGCTTCACGCATGTGTGGCTGCTGAATAAGCACCAGCAGATCCACACCAGGGAGCGTCCGTACCCCTGCACAGAGTGCGGAAAGAGCTTCACACAGCTCCAGATCCTCAACAGGCACCTGCTGACTCACAACGGCCAGCGGCCTTTCCAGTGCTCCTACTGCGAGAAGAGCTTCGCCCAGCTGGCCAGCCTCACGCGCCACGAAAGAATCCACACGGGCGAGAGGCCGTACCTCTGCACCACCTGCCAGAAGACGTTCCTCACCCACGGAGAGCTGGTGAGGCATCAGCGCAGCCACAGTAACTTCAGGCCGTTCAGCTGCCCACATTGCCCGAAGAGCTTCAAAACCAAGCGAGCTCAGAGCGAACAcctcaatacacacacaggagagcGGCCGTTTGCGTGCACCCGTTGCGGGAAGAGGTTCGCCAAGTCGACCTCGCTCGTCCGACACAACCTGACTCACACGGGGGAGCGGCCCCACCAGTGCTCGCAGTGCGGCAAGACCTTCCTCACCTCTGGCGAGCTCCTGCTCCACAAGCggatccacacaggagagaggcCCTACCCCTGCTCCTACTGCGAGAGGAGGTTCAGGTGCTCCTCGGACCTCAACATGCACATTCGGACACACACCGGAGAGAAGCcacacagctgtctgctctgtaaGAAGAGTTTCTCTACTTCTACGAGGCTGAAGAgacacgtacgcacacacatgGAGAAGGGTATAGTTGTGGAATCATTGAGTCTTTGAGCTGTTAGGAGCTAATGATGTATTTATTGGAAGAGGAAGATTGTTGCTTTAAACAATAATAAACTGTCTTTAATCTATAA

Function

NR:

description
PREDICTED: zinc finger protein 260-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039792518.1 True 2408 mRNA 0.54 7 21937338 21945575

Neighbor

gene id symbol gene type direction distance location
si:ch211-214j24.10 LOC103357125,LOC104922658 coding downstream 1942 21928239 ~ 21935396 (-)
apex1 apex1 coding downstream 42616 21890610 ~ 21894722 (-)
selenoo2 LOC106935628,LOC103357121,LOC107081058 coding downstream 100742 21829011 ~ 21836596 (-)
LOC120553085 LOC103357120 coding downstream 109404 21816182 ~ 21827934 (-)
LOC120553490 ano4,LOC102780176 coding downstream 184067 21684210 ~ 21753271 (-)
nav3 nav3 coding upstream 3161 21948736 ~ 22179107 (-)
zdhhc17 zdhhc17,LOC102798393 coding upstream 588679 22534254 ~ 22573905 (-)
LOC120553033 LOC103354931,LOC102080527,LOC102775588,LOC101467455 coding upstream 930348 22875923 ~ 22893181 (-)
LOC120553034 NA coding upstream 974607 22920182 ~ 22942119 (-)
LOC120553037 NA coding upstream 1147244 23092819 ~ 23116421 (-)
G229541 NA non-coding downstream 57118 21879904 ~ 21880220 (-)
G229539 NA non-coding downstream 58633 21878272 ~ 21878705 (-)
G229527 LOC108228952,LOC107098074,LOC105922964,LOC106609550,LOC103375704 non-coding downstream 81049 21854383 ~ 21856289 (-)
LOC120553093 NA non-coding downstream 159662 21777033 ~ 21777676 (-)
G229413 NA non-coding downstream 254799 21681560 ~ 21682539 (-)
G229558 NA non-coding upstream 374698 22320273 ~ 22320528 (-)
LOC120553112 NA non-coding upstream 436190 22381765 ~ 22449387 (-)
G229576 NA non-coding upstream 510614 22456189 ~ 22456445 (-)
G229589 csrp2 non-coding upstream 569415 22514990 ~ 22531298 (-)
G229605 NA non-coding upstream 711358 22656933 ~ 22737978 (-)
LOC120553090 NA other downstream 126241 21771088 ~ 21811097 (-)
slc38a2 slc38a2 other downstream 462736 21461076 ~ 21474602 (-)
ptprz1b NA other downstream 791805 21063691 ~ 21145533 (-)
G229199 NA other downstream 979118 20957657 ~ 20958220 (-)
cdk17 LOC104930593 other downstream 1582711 20301092 ~ 20354627 (-)
G229716 NA other upstream 1159185 23104760 ~ 23239573 (-)
glipr1a NA other upstream 1258193 23203768 ~ 23210497 (-)
LOC120553170 NA other upstream 1744944 23690519 ~ 23711804 (-)
G229907 NA other upstream 1754122 23699697 ~ 23700198 (-)
LOC120553046 NA other upstream 1912644 23858219 ~ 23863974 (-)

Expression


Co-expression Network