LOC120553038


Basic Information

Item Value
gene id LOC120553038
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 23084579 ~ 23085594 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638088.1
CCCGATCCTACAGACCCCAACACAccagaacataaaacaaaaggtccttctaataaggaataagaacgttggaaacagACAATCCGTTCCTGAACAAAGGATCCGTAAGGGTGATGGCTACTCGATAGCACATACGGCTGAAATCAACCATGATAAAAGGCCGTGCGCTTCTCTAAACCTCTCTGTGAAAGCTGCTACCCCTAAAAACGTTCACCATCGTAAGCCTAAGAAGCAATTTATTGAGCCTGAGCCATACCAGAAAGGCTTCCCGCCCAAAAGACGCAACCATTCCTTTGTTCCGGTCTCATCTTACCAGgccactgtatcttatgatcctaacacagttgcagagcAACTAAAGGCTACGGAAGACTTAGTTTCATTGTATTTGACGCCTGAGGACGATTTCACACAGCCACCCCTGTGGAGCAGAAACGGATGTCTACACAAGCCTAAGAAGGGATCTAAGAAGAGATCTATTGAgCCATACACGGACGGTTTCCCACCCAAAAGACGCCGCCCTTCCTTTGTTCCAGACTCCTCTTACACGGCCTctgtatcttatgatcctaacacagct

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638088.1 True 580 lncRNA 0.47 5 23084579 23085594

Neighbor

gene id symbol gene type direction distance location
LOC120553034 NA coding downstream 142460 22920182 ~ 22942119 (-)
LOC120553033 LOC103354931,LOC102080527,LOC102775588,LOC101467455 coding downstream 191398 22875923 ~ 22893181 (-)
zdhhc17 zdhhc17,LOC102798393 coding downstream 510674 22534254 ~ 22573905 (-)
nav3 nav3 coding downstream 905472 21948736 ~ 22179107 (-)
LOC120553803 LOC103357126 coding downstream 1139004 21937338 ~ 21945575 (-)
LOC120553037 NA coding upstream 7225 23092819 ~ 23116421 (-)
LOC120553577 NA coding upstream 91592 23177186 ~ 23187762 (-)
cmah LOC101476433,LOC102306063,LOC100691852,LOC101466628,LOC102209249,LOC102786627,LOC103459632 coding upstream 143489 23229083 ~ 23275543 (-)
phax NA coding upstream 444163 23529757 ~ 23531807 (-)
dnajc2 dnajc2 coding upstream 476566 23562160 ~ 23588760 (-)
G229626 NA non-coding downstream 224168 22860118 ~ 22860411 (-)
G229624 NA non-coding downstream 237496 22846854 ~ 22847083 (-)
G229616 NA non-coding downstream 339480 22741374 ~ 22745099 (-)
G229610 NA non-coding downstream 406035 22677850 ~ 22678544 (-)
G229609 osbpl8 non-coding downstream 415311 22666693 ~ 22669268 (-)
G229782 NA non-coding upstream 197935 23283529 ~ 23284051 (-)
G229784 NA non-coding upstream 199973 23285567 ~ 23286896 (-)
G229774 NA non-coding upstream 213115 23298709 ~ 23313086 (-)
G229802 NA non-coding upstream 327522 23413116 ~ 23413758 (-)
G229867 NA non-coding upstream 441511 23527105 ~ 23527539 (-)
LOC120553090 NA other downstream 1273482 21771088 ~ 21811097 (-)
slc38a2 slc38a2 other downstream 1609977 21461076 ~ 21474602 (-)
ptprz1b NA other downstream 1939046 21063691 ~ 21145533 (-)
G229199 NA other downstream 2126359 20957657 ~ 20958220 (-)
cdk17 LOC104930593 other downstream 2729952 20301092 ~ 20354627 (-)
G229716 NA other upstream 19166 23104760 ~ 23239573 (-)
glipr1a NA other upstream 118174 23203768 ~ 23210497 (-)
LOC120553170 NA other upstream 604925 23690519 ~ 23711804 (-)
G229907 NA other upstream 614103 23699697 ~ 23700198 (-)
LOC120553046 NA other upstream 772625 23858219 ~ 23863974 (-)

Expression


Co-expression Network